G12136


Basic Information

Item Value
gene id G12136
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 14827051 ~ 14829486 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU17945
CTTGCCTGGATTCTGCTGCTTAAAAGAGGAAGTCTCCTCAATGAAGAGCTTGAGGCTCGTCCAGAAGTCTGTGAATGGAGATCCTGATCCAGACTTGCCCTCCTGGACAGAATCAATGACCTCCCAGCTACAATTAGAAGaccttagtGCTGATCCACGGTCTTCAGCAGTCATCTCAAAATCTTTAGGTTTCAACATGAAAGGCGTTCAGGTAAGTCAGAAGGTGAGTGTGTCAGTGATAAGTTCCAGAGTTCAGACAGAGTTACAAATGAAGTGACGCATTAAGCCACACTAGCTAGTGTTTATGTTGACCAAGGCCTGAGCTTCACTATTTCAACGGGTCAAGTCTAAAAATACCAGAGTCACATAGCATTCCACGAGCAGGCATCAGACAGACAGTGCTGgggcatgaacacacacacgtacaaacACTCCACATAATA

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0031497 chromatin assembly biological_process
GO:0048468 cell development biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0071103 DNA conformation change biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17945 True 443 lncRNA 0.38 2 14827051 14829486

Neighbor

gene id symbol gene type direction distance location
si:ch211-106h4.12 NA coding upstream 51555 14773824 ~ 14775496 (+)
si:ch211-106h4.4 malrd1,LOC107713964,LOC107686070 coding upstream 81093 14726160 ~ 14745958 (+)
cacnb2b LOC107664070,LOC107751551,LOC107686054 coding upstream 117852 14682890 ~ 14709199 (+)
tmem236 tmem236,si:dkey-32m20.1,LOC107713979,LOC107686088,LOC107751554,LOC107664072 coding upstream 145719 14678449 ~ 14681332 (+)
stam stam,LOC107664071,LOC107556673,LOC107686052 coding upstream 149744 14669402 ~ 14677307 (+)
rnf182 rnf182,LOC107686061,LOC107586260,LOC107751563,LOC107713969,LOC107579226 coding downstream 6673 14836159 ~ 14836952 (+)
ranbp9 ranbp9,LOC107713984,LOC107556766,LOC107664064,LOC107686062,LOC107751564 coding downstream 8936 14838422 ~ 14849429 (+)
epdr1 epdr1,LOC107664036,LOC107558964,LOC108267170,LOC107713986 coding downstream 23214 14852700 ~ 14855171 (+)
stard3nl stard3nl,LOC107686094,LOC107713985,LOC107664037,LOC107751580 coding downstream 26343 14855829 ~ 14863508 (+)
otulinb LOC107713989,LOC107657417,LOC107718039,LOC107701026,LOC107556827 coding downstream 81389 14910875 ~ 14915309 (+)
G12135 fam134b,LOC107686060,LOC107664066,LOC107584095,LOC107751562,LOC107558208,LOC107713983 non-coding upstream 106 14823161 ~ 14826945 (+)
G11918 LOC107664027,LOC107713977,LOC107584165,LOC107556660 non-coding upstream 189246 14637589 ~ 14637805 (+)
G11917 NA non-coding upstream 190282 14636444 ~ 14636769 (+)
G11914 NA non-coding upstream 223506 14559860 ~ 14603545 (+)
LOC122355240 NA non-coding upstream 329178 14495450 ~ 14497873 (+)
G12143 NA non-coding downstream 27886 14857372 ~ 14886069 (+)
G12144 NA non-coding downstream 36712 14866198 ~ 14878772 (+)
LOC122323195 NA non-coding downstream 109703 14939189 ~ 14982818 (+)
LOC122328201 NA non-coding downstream 195917 15025403 ~ 15026789 (+)
G12211 NA non-coding downstream 205443 15034929 ~ 15037006 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other upstream 44074 14776322 ~ 14782977 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other upstream 73890 14746107 ~ 14753161 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 647436 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 1953043 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 2200664 12623823 ~ 12626387 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 412311 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 1030693 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 1437557 16267043 ~ 16268797 (+)
LOC122323293 NA other downstream 1620646 16450132 ~ 16456532 (+)
LOC122361622 NA other downstream 1895128 16724614 ~ 16776351 (+)

Expression


Co-expression Network