G412


Basic Information

Item Value
gene id G412
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 892401 ~ 892633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU499
TGGCCACAAAAGTGAGTACACCCGTAAGTGAAAATGTCCAAATTGGGCCGAAAGTGTCAATATTTTGTGTGGCCACCATTATTTTCCAGCACTGCCTTAACCCTCTTGGGCATGGAGTTCACCAGAGCTTCACAGGTTGCCACTGGAGTCCTCTTCCACTCCTCCATGATGACATCACAGAGCTGGTGGATGTTAGAGACCTTGCGCTCCTCCACCTTCCATTTAAGGATGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU499 True 233 lncRNA 0.47 1 892401 892633

Neighbor

gene id symbol gene type direction distance location
CI01000000_00825374_00827067 NA coding upstream 64635 825245 ~ 827766 (+)
CI01000000_00814932_00820795 NA coding upstream 71526 814932 ~ 820875 (+)
CI01000000_00753279_00782484 PPP3CA, PPP3CB coding upstream 109917 753279 ~ 782484 (+)
CI01000000_00678887_00679319 NA coding upstream 211954 678712 ~ 680447 (+)
CI01000000_00639336_00658655 NA coding upstream 233353 639152 ~ 659048 (+)
CI01000000_00948279_00956688 NA coding downstream 55646 948279 ~ 957335 (+)
CI01000000_00977418_00984766 TRAPPC11, TRAPPC11.S coding downstream 84785 977418 ~ 984766 (+)
CI01000000_01005677_01006063 NA coding downstream 112767 1005400 ~ 1006589 (+)
CI01000000_01061972_01081591 STOX2A, STOX2B, STOX2 coding downstream 168014 1060647 ~ 1082636 (+)
CI01000000_01100131_01102607 NA coding downstream 207498 1100131 ~ 1102724 (+)
G408 NA non-coding upstream 13632 878478 ~ 878769 (+)
G399 NA non-coding upstream 34886 857315 ~ 857515 (+)
G396 NA non-coding upstream 40122 851759 ~ 852279 (+)
G243 NA non-coding upstream 200794 646725 ~ 691607 (+)
G344 NA non-coding upstream 246627 645544 ~ 645774 (+)
G454 NA non-coding downstream 31853 924486 ~ 924704 (+)
G455 NA non-coding downstream 32839 925472 ~ 925690 (+)
G457 NA non-coding downstream 46335 938968 ~ 939656 (+)
G465 NA non-coding downstream 109623 1002256 ~ 1002595 (+)
G424 NA non-coding downstream 197160 1089793 ~ 1098771 (+)
G350 NA other upstream 215464 671842 ~ 676937 (+)
G252 NA other upstream 385329 503209 ~ 507072 (+)
G435 NA other downstream 532488 1425121 ~ 1432854 (+)
G579 NA other downstream 922820 1767917 ~ 1908808 (+)
G2774 NA other downstream 3561145 4453778 ~ 4454232 (+)
G2850 NA other downstream 3833353 4725986 ~ 4726482 (+)
G6811 NA other downstream 9312198 10204831 ~ 10321679 (+)

Expression


Co-expression Network