G12567


Basic Information

Item Value
gene id G12567
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16299172 ~ 16299744 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU18568
agaaggcggccatcttgggcagcggctctgggaagaaggcggccatcttgggcagcggctctgggaagaaggcggccatcttgggcagcggctctgggaagaaggcggccatcttgggcggcggctcggggaagaaggcggccatcttgggcggcggctcggggaaggcagcCATTACTGGATTTGATGCTgtatccttttcctcctcaacacccaacgtgaaagctgaccccacagtcactaaaccaaactcaataaactgagcaagcgactcacgtggaccctcgcgaacaagtttagatttgagcggctgatgtactccctcatgatacaactcaatcaataaacagtccggtatgtcagagaggtaagccatgtccaaaaactcttgagtataatcctcaatcgATCGGGtaccttgcttgagggccaataaacgtctagcgagggtcctacctggccatggatcaggtgaaaagccgctggatcctggtgcgaggttgcattctgtca

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032502 developmental process biological_process

KEGG:

id description
ko04340 Hedgehog signaling pathway
ko04360 Axon guidance
ko05217 Basal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
TU18568 True 513 lncRNA 0.36 3 16299172 16299744

Neighbor

gene id symbol gene type direction distance location
brinp2 brinp2,LOC107658350,LOC107562711,LOC107722070,LOC107720848,LOC107700985 coding downstream 274522 15948412 ~ 16024650 (-)
cenpl cenpl,LOC107720853,LOC107599910,LOC107657424,LOC107722063,LOC107700989,LOC107557192 coding downstream 439081 15856239 ~ 15860091 (-)
eif2b3 eif2b3,LOC107722074,LOC107599900,LOC107700990,LOC107720854,LOC107558289 coding downstream 465999 15803479 ~ 15833173 (-)
ptch2 ptch2,LOC107557169,LOC107700991,LOC107720855,LOC107599897,LOC107722076,LOC107657459 coding downstream 502875 15769765 ~ 15796297 (-)
atp6v0b atp6v0b,LOC102788333 coding downstream 617146 15676203 ~ 15682026 (-)
tnn tnn,tnw,LOC107722078,LOC107658358,LOC107678933,LOC107726927 coding upstream 158013 16457757 ~ 16485204 (-)
nmnat2 nmnat2,LOC107658365,LOC107563562,LOC107678925,LOC107557267 coding upstream 388881 16688625 ~ 16698623 (-)
LOC122356645 LOC107709317 coding upstream 547947 16847691 ~ 16849363 (-)
LOC122324462 LOC107709317 coding upstream 552193 16851937 ~ 16852961 (-)
LOC122327065 NA coding upstream 556371 16856115 ~ 16856779 (-)
LOC122356097 NA non-coding downstream 544750 15718628 ~ 15754422 (-)
LOC122359617 NA non-coding downstream 745568 15547035 ~ 15553604 (-)
G12313 ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 non-coding downstream 1058346 15237959 ~ 15240826 (-)
G12308 NA non-coding downstream 1075717 15223211 ~ 15223455 (-)
G12199 NA non-coding downstream 1364147 14934769 ~ 14935025 (-)
G12585 NA non-coding upstream 145219 16444963 ~ 16445224 (-)
G12619 LOC107722060,LOC107563589,LOC107658360,LOC107559063,LOC107678928,LOC107726916 non-coding upstream 197959 16497703 ~ 16498417 (-)
G12614 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107557223 non-coding upstream 203298 16503042 ~ 16504056 (-)
G12620 NA non-coding upstream 242739 16542483 ~ 16542771 (-)
G12682 NA non-coding upstream 422952 16722696 ~ 16723505 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 30337 16224723 ~ 16268835 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other downstream 719466 15559663 ~ 15579706 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other downstream 1145183 15133971 ~ 15153989 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other downstream 1171681 15120587 ~ 15127491 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 1688906 14578995 ~ 14610266 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 183416 16483160 ~ 16512019 (-)
G12658 lamc1,LOC107678923,LOC107726890,LOC107557259,LOC107722047 other upstream 371832 16671576 ~ 16673710 (-)
G12839 NA other upstream 506517 16806261 ~ 16806738 (-)
G12841 NA other upstream 522881 16822625 ~ 16823073 (-)
LOC122327046 NA other upstream 525258 16825002 ~ 16825808 (-)

Expression


Co-expression Network