G12585


Basic Information

Item Value
gene id G12585
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16444963 ~ 16445224 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU18589
TCAGATGTACATCGATTGCTGGCGTTCCTCCACAACATGCGCATGTGACACCGAACGTACCTCCACTGGCTCTGTTGAAGCTGTTCCAGAGATTTGAACTTGGTTTCTGATTTAACCCCCGTGTGTGTGTTGCCATTAGCGAGTCCTCCTAcaggcagccacccagcctctTATTCTAGTGTCAGAAGTGATTAGTTCGCAGCGTTCAGTGACTTGTGAAGATTTGGGGGGTGGTGTATCTGCCTACTTACATCAGACTCAC

Function

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU18589 True 262 lncRNA 0.33 1 16444963 16445224

Neighbor

gene id symbol gene type direction distance location
brinp2 brinp2,LOC107658350,LOC107562711,LOC107722070,LOC107720848,LOC107700985 coding downstream 420313 15948412 ~ 16024650 (-)
cenpl cenpl,LOC107720853,LOC107599910,LOC107657424,LOC107722063,LOC107700989,LOC107557192 coding downstream 584872 15856239 ~ 15860091 (-)
eif2b3 eif2b3,LOC107722074,LOC107599900,LOC107700990,LOC107720854,LOC107558289 coding downstream 611790 15803479 ~ 15833173 (-)
ptch2 ptch2,LOC107557169,LOC107700991,LOC107720855,LOC107599897,LOC107722076,LOC107657459 coding downstream 648666 15769765 ~ 15796297 (-)
atp6v0b atp6v0b,LOC102788333 coding downstream 762937 15676203 ~ 15682026 (-)
tnn tnn,tnw,LOC107722078,LOC107658358,LOC107678933,LOC107726927 coding upstream 12533 16457757 ~ 16485204 (-)
nmnat2 nmnat2,LOC107658365,LOC107563562,LOC107678925,LOC107557267 coding upstream 243401 16688625 ~ 16698623 (-)
LOC122356645 LOC107709317 coding upstream 402467 16847691 ~ 16849363 (-)
LOC122324462 LOC107709317 coding upstream 406713 16851937 ~ 16852961 (-)
LOC122327065 NA coding upstream 410891 16856115 ~ 16856779 (-)
G12567 NA non-coding downstream 145219 16299172 ~ 16299744 (-)
LOC122356097 NA non-coding downstream 690541 15718628 ~ 15754422 (-)
LOC122359617 NA non-coding downstream 891359 15547035 ~ 15553604 (-)
G12313 ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 non-coding downstream 1204137 15237959 ~ 15240826 (-)
G12308 NA non-coding downstream 1221508 15223211 ~ 15223455 (-)
G12619 LOC107722060,LOC107563589,LOC107658360,LOC107559063,LOC107678928,LOC107726916 non-coding upstream 52479 16497703 ~ 16498417 (-)
G12614 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107557223 non-coding upstream 57818 16503042 ~ 16504056 (-)
G12620 NA non-coding upstream 97259 16542483 ~ 16542771 (-)
G12682 NA non-coding upstream 277472 16722696 ~ 16723505 (-)
G12708 NA non-coding upstream 337920 16783144 ~ 16784555 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other downstream 176128 16224723 ~ 16268835 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other downstream 865257 15559663 ~ 15579706 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other downstream 1290974 15133971 ~ 15153989 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other downstream 1317472 15120587 ~ 15127491 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 1834697 14578995 ~ 14610266 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 37936 16483160 ~ 16512019 (-)
G12658 lamc1,LOC107678923,LOC107726890,LOC107557259,LOC107722047 other upstream 226352 16671576 ~ 16673710 (-)
G12839 NA other upstream 361037 16806261 ~ 16806738 (-)
G12841 NA other upstream 377401 16822625 ~ 16823073 (-)
LOC122327046 NA other upstream 379778 16825002 ~ 16825808 (-)

Expression


Co-expression Network