G12730


Basic Information

Item Value
gene id G12730
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16830649 ~ 16831883 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU18820
ATTGACATAGTATTAGTgactaaaaactaaacatatTCACACTGTTGCCTATATAATTGAGAGACATGCAATATGTTGGGAAAATAAGGGAAgaacaattaaatgaataaattcactCTGAAAATTTGCCTTTACCTATTCAGGCTAGTTCTAAAGAGCTATGTCCTAAAAATCATTGGTGACTTAATTCTGTAGATGTAGATATTATTTAATCGTTTGCTGGTTTGTCTGAAATTGATGGATTATGAATAAAACTGTCCAACCTTATCTCACAGGAAAACATAGCAATTTTATATGAGTATTTTAGTATTTCGTATGAGTTAAACATGAAAGCCCTTCTCTTGTCAGACCTCTACATTTAATGGAATGATGCAAATGAGACTGAGAAGTGAGATTAATACCAATTTATCACTAATGTACATTAATTAGCCACTAAGCCTTTAGTAGTTAGTAGGTCAGTTAGTAGTTACTGAAATCGCTGCTTATGTATatgaattttattgtaatatttaccCTTTAATCTTTTTCTTACCCTTTTCacaaagagaaataaacagtaaagcattaataataaactgaataataaaCAGTCTTGCAATGGTTTTtctataatttaatgtaatgaatGGCAATTTTACAGTACTATAGTTTCAccactaaataataaatagatttatcCTGAACGGTATAATTACTGCTTGAACAAGAATATATGTGAAACATATGTAGTGCAGTTATTCAGTGTTTCTATGATATTAATCTATGTTTCAGTTCTTAAAATTGCTTTGGTAAGAGAGATTTAGGTTTTTGTACGGAGCTGCCGGGTTTCCTCTCACTGTGGGCTTCAACGCACAGTAGTAAACTGCAGAGTCCGTTACTTTTGCAGAGGAGATCTCCAGATCCACAgtggttttctttttgtttaatttcacaGACATTCCAGGTTGTGTGCTTTCAATCTTCCCGCTGTTTTGTAGtatcagaagaagaaaatctGGAGTTGATCTTGGATATTGACGATACCAGTACAGAGAAAGGGCGCTAGAGCAGTTGCAAGAAAGCGTTATTTTGTTCCCAATCTTCCCGTGAACCTCAGTTTGGACAGAAGTGATGACATCGTTACAGCATCcggctaaaaaagaaaaattattatttgtaatagtaCGTTCGTAGTTTAGTTGACCTTTTTTGAACCTGACCTCGGGAGGATATCTCGCATAGCTTTAATGatgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18820 True 1235 lncRNA 0.59 1 16830649 16831883

Neighbor

gene id symbol gene type direction distance location
LOC122361612 NA coding upstream 107091 16722128 ~ 16723558 (+)
smg7 LOC107563557,LOC107722067,LOC107658366,LOC107557277,LOC107678926 coding upstream 112547 16701077 ~ 16718102 (+)
lamc2 LOC107722066,LOC107658364,LOC107563561,LOC107678924,LOC107726891 coding upstream 141277 16677139 ~ 16689372 (+)
lamc1 lamc1,LOC107658363,LOC107563558,LOC107557259,LOC107678923,LOC107722047 coding upstream 160320 16625845 ~ 16670329 (+)
dhx9 dhx9 coding upstream 207616 16613776 ~ 16623033 (+)
LOC122356618 LOC107738189,LOC107684434,LOC107591326,LOC107559148,LOC107706401,LOC107659373 coding downstream 11838 16843721 ~ 16847555 (+)
ing5b ing5b,LOC107738258,LOC107706410,LOC107591443,LOC107557337,LOC107659430 coding downstream 162806 16994689 ~ 16996615 (+)
pak2a pak2a,LOC107738196,LOC107684413,LOC107659428,LOC107706409,LOC107557297,LOC107591323 coding downstream 165206 16997089 ~ 17009227 (+)
klhl6 klhl6,LOC107591321,LOC107706408,LOC107684416,LOC107558769,LOC107738218 coding downstream 177683 17009566 ~ 17014352 (+)
ptx3b LOC107591444,LOC107738195,LOC107684438,LOC107659376,LOC107559106 coding downstream 193300 17025183 ~ 17029802 (+)
G12729 LOC107678904 non-coding upstream 1323 16827030 ~ 16829326 (+)
G12669 NA non-coding upstream 46105 16783900 ~ 16784544 (+)
G12607 NA non-coding upstream 137030 16690926 ~ 16693619 (+)
G12530 pappa2,LOC107568983,LOC107722077,LOC107558342,LOC107658303,LOC107678935,LOC107726923 non-coding upstream 565729 16263774 ~ 16264920 (+)
LOC122359940 LOC107743936,LOC101883431 non-coding upstream 795741 16032757 ~ 16034908 (+)
G12711 NA non-coding downstream 7688 16839571 ~ 16842431 (+)
G12753 NA non-coding downstream 60898 16892781 ~ 16893081 (+)
G12759 si:busm1-101l20.6 non-coding downstream 69034 16900917 ~ 16910872 (+)
G12773 NA non-coding downstream 97625 16929508 ~ 16951713 (+)
G12776 NA non-coding downstream 105049 16936932 ~ 16957259 (+)
LOC122361622 NA other upstream 54298 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 374117 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 561852 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 954885 15860179 ~ 15875764 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other upstream 1581400 15241797 ~ 15249249 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other downstream 200256 17032139 ~ 17039903 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 530362 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 734958 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 775369 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 947456 17779339 ~ 17782364 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016589 tradv15.0 coding NC_007113.7 CM002886.2 36251713 ~ 36252293 (-)