G12784


Basic Information

Item Value
gene id G12784
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16958408 ~ 16967102 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU18889
TGAGtgttgagtgtgtttgagtcacTGTGGGCCTCAGAGCACAGTAATACACAGcagagtcagacacacacacatcctggaTCGTCAGAGGAACTGAAGTTTTGTTGAGAGATGCATGAAATCTCTCCTTGAATTCTTTCTCACTGTTTCCAGATGTAGAGAATTTATTCAGCATGTGTTTGGGATTTCTGCTGTCTTTCTGTTGGTACCAGAAGAGAGTTGGTCCTGTATAACCAGTCTGATATGTACAGTCGATCGTTACAGTATCACCTTCAAAAGCAAACTGAATCCTTGCATGCTGATCAACTTTGTCTATAGAATTAC

Function

GO: NA

KEGG:

id description
ko03060 Protein export
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
TU18889 True 324 lncRNA 0.42 2 16958408 16967102

Neighbor

gene id symbol gene type direction distance location
LOC122356618 LOC107738189,LOC107684434,LOC107591326,LOC107559148,LOC107706401,LOC107659373 coding upstream 110853 16843721 ~ 16847555 (+)
LOC122361612 NA coding upstream 234850 16722128 ~ 16723558 (+)
smg7 LOC107563557,LOC107722067,LOC107658366,LOC107557277,LOC107678926 coding upstream 240306 16701077 ~ 16718102 (+)
lamc2 LOC107722066,LOC107658364,LOC107563561,LOC107678924,LOC107726891 coding upstream 269036 16677139 ~ 16689372 (+)
lamc1 lamc1,LOC107658363,LOC107563558,LOC107557259,LOC107678923,LOC107722047 coding upstream 288079 16625845 ~ 16670329 (+)
ing5b ing5b,LOC107738258,LOC107706410,LOC107591443,LOC107557337,LOC107659430 coding downstream 27587 16994689 ~ 16996615 (+)
pak2a pak2a,LOC107738196,LOC107684413,LOC107659428,LOC107706409,LOC107557297,LOC107591323 coding downstream 29987 16997089 ~ 17009227 (+)
klhl6 klhl6,LOC107591321,LOC107706408,LOC107684416,LOC107558769,LOC107738218 coding downstream 42464 17009566 ~ 17014352 (+)
ptx3b LOC107591444,LOC107738195,LOC107684438,LOC107659376,LOC107559106 coding downstream 58081 17025183 ~ 17029802 (+)
pdcd10b LOC107684411,LOC107557361,LOC105906142,LOC107706406,LOC108411198,LOC100709687 coding downstream 72900 17040002 ~ 17044773 (+)
G12776 NA non-coding upstream 1149 16936932 ~ 16957259 (+)
G12781 NA non-coding upstream 2531 16946874 ~ 16955877 (+)
G12773 NA non-coding upstream 6695 16929508 ~ 16951713 (+)
G12759 si:busm1-101l20.6 non-coding upstream 47536 16900917 ~ 16910872 (+)
G12753 NA non-coding upstream 65327 16892781 ~ 16893081 (+)
G12818 NA non-coding downstream 156037 17123139 ~ 17123367 (+)
G12823 map1sb,LOC107738188,LOC107659421,LOC107591330,LOC107684407,LOC107706295 non-coding downstream 165975 17133077 ~ 17134888 (+)
G12972 NA non-coding downstream 194074 17161176 ~ 17162972 (+)
G12975 NA non-coding downstream 215082 17182184 ~ 17270444 (+)
G12982 diras1b,LOC107659419,LOC107591332,LOC107557388,LOC107684404,LOC107738254,LOC108236225,LOC103373792 non-coding downstream 220015 17187117 ~ 17190607 (+)
LOC122361622 NA other upstream 182057 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 501876 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 689611 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 1082644 15860179 ~ 15875764 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other upstream 1709159 15241797 ~ 15249249 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other downstream 65037 17032139 ~ 17039903 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 395143 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 599739 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 640150 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 812237 17779339 ~ 17782364 (+)

Expression


Co-expression Network