G12844 (LOC107563566,LOC107738189)


Basic Information

Item Value
gene id G12844
gene name LOC107563566,LOC107738189
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16844342 ~ 16847554 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU18971
aagcataattattttttatttattatacactgATTGAAAATGCAATCTTACAATATTAGCATTCAATAGATTAAGATAGAGATcgatttttctttgtgtttctacTTAATTATTcttgatttaattatattttaattttaattaatattttactgttactgtttttttgtaattattactgGAAAATTGTTTCTACACCATTTGTTTCAGTCTACTAACTATGTTCAGAAACTCTTGGTCAgacaggaattttttttttcttactcagACTTTTCTTCTGGATTgtaaaaatcatcaaaatagCCCTCAGCGGCTCTGAGCATCTGAACCACAGCATTCAGAAGCAGTATGTCAGTTTGAGAGTCTATTTCCAGTTCTTGGTAGTAGTTTTTCACTGGGACCACAGCAGACAGAGAAACTCCAAGCTTAGTGCTGATCTCCTGCATCTGTCACAAAGTAATTCATCAAGACAACATGtgaaacaaacacattacataATACTTAGGCTACTACAAAGTTCTGTACATTCATTCATACCATTGTGTTGATATAGTGGCTCTGGTAGACATTTTTCACGTCTTCTGCCACTAAAGGACAGGCCTCATCCACCTTAGTAAGCAGAACCAGCTGAGGAATAGCTGAAGTAAAGAACAACACTTTATATGCTATCACATCACAGAGACCACCATCCTATCCTACCCAGTGAATAAAGATTCATGTTAGTTGTACACTCAAACCCCACAAGAGGTTCTATGGAGCACggaatttaaagggacagtccatCACAACAATCCTGTAATTATTTAGTCACtgttatgtcattccaaacctctGTGTATTTCTTTCAACTGCTTATAACAAAAGAAGATCATTTAGAACAATGTATAAGTGTACTGAAGACTGAATTTCCATAATTTAATCTGTATAACACACTCATGTCAACTGAAATTAATTCAAATCTGTTCAAAATTGTTACGCACATAGATGGTTGGCTTTCTTTCGAAAAGCCACAAACTTCTCAATCATTTTGTCAGGCAGGAGCTTGACTCTGCTGATGTCAATCACGTAAACCACACAGTGAATCTTGTCCTTCAAGCCAGGAGATTTATTGAAATGAGGGGAGCCTGGCTGTATAGGCACTAATGGGTTAAACTAAAAAAGGAGAAAGACAGAATTTTTAAATCgttaagaaagaaaatattgaataaaagtTGACATTGCAGACCTATTAACGACTAAGTTTACACTGTAAGTTCTCACCTGATACTTGTCTTGAACGTGACCTTTCAAAATACTGGTAAAATCCTCTACATCTAGACCAGAGTTTTCACCGTCCTCCAGACCCATCGAGTCACACAGAGTAAAGGGGACATGGGTGACACTGTTGCTTGGCTTGATGTAGTAGGTACGGAACTAcatgaaacaaatatttagcaATCATTTCCAGTATACACTTAGACTAGTTATATTATAATtgcacaactgtataattagtCACAATTCTCACAAAATATCTGACACTGTAAAACATCAGAAGATAATAAGGACGCATGTCTACCTGAGTAGTCAAACTGGTGCCAGCAATGCCAGTGTTAGCCTGAATGCTCACATAACCTTTGAACACAGAGTTGATGGAGTTGAAGAAGCTTGATTTCCCAGCTCCTACTGGACCCACCAAAAGAATCCGAGCCTGTTTGACTGAGTTAACAGAAGGCTTCCAGCTAGAGATGGTGCTCAAGTGTGCCTGTCTCTTcctaaaacattaattaattaccaTTAGCAAATTCCttaaagagttagttcacccaaaaaggaaaattagcAATTAGATTAGTCTCCTCTTAGAATAGTCCTTGTTTTGTGCTTCTAATATGTgacctgcatttttttttgtcctccaCATTCATCGCTAATCATGAAACTCGTCTTACATAATCTGCCAGAACTGCTatggaaggtttttttttaacagataatGCACAGATAATGCATATACAATGGCACTGATAAATGGAAATAGATCAATATTAAGGAAGGTACATACAACATCAAtgcaaaatatcaataaatttgcatatattctgagaaagaaagaaaaagaacaagtTTGTAGGAAGTGCtggtaatgcattttattcatccTCAGGAGCCACGTGAAGGACGTTTTATCACAGATACGTCtactttatttaatgtcttCCAAAATGTAAcagcaaacacttttttttagtcCCATGGAAAAGCTTGAAGGAGTCGTGTTTGGTGCTTGCACATCAGTGTCATTAATCTATAATTTCCTGATTTTAgccattactcatgggtaaggttaggtttaggtatagagatatggtcaaaataaaggttttgaatTAATATCAggatgtgcgtgtgtgtgtgtgttcactgatCTGTGTGCGCACATgaatgggttaaatgcagagcaaaATTTCCAAGTATGAGTCACCATACTTGGCCATACGTCACTTCACACTTTTAATTGGTTATCGCTAAATAATGAGTTCAGTTTACAGAAGATAGTGCATTTGGTTTGCTTTACTCACTCAGAGTTCCACTGCACATTTCTCCATGGTTTCTCCATAAGTCCTCTGCTATCTAGGGAGAATTTAGTCCAGAATACAAGTTACTCACAAAACCTTTACATTGAGTAAATTACCCTCTCAGCAATTATCTGAAAACAATACAAACCCTCCACTCTGTACACCTCACATTCTGCCAGCTGTAAGTTATTCCCATGCATCTTCTGTGGAACAAACTGGTATGTTCCTGGATTACTGTGGACAGTGGCTGTATTATTGTGAAGAAACACTAAAGAGCCAAAGTTTGGACCATTGTCAGTAAAAGCGTACTGGGGATTTCCACTGACAACACGCAGAGGATCCTCTTTCATTTCTTTGTCATTAAAGCTAAAGAGAAAAGCTTTGTCATCCGCAGTATTTTGGTTGGTTTGGCGGAAATCCTTGCTAGTGAAAGCTCCAAAAACGTATCCAGCCTTATTGTAAGCTACAATGACAGTTGGTCCCTGCATATTGCACTTTTGGTGAAATGCAGCAGCAGTGAACCCATGCACACTGGCTTTGAACAGCAGGCAGAGGTTAGCATGGTTGAGCAATGAGCAGAGCTTATTCTTCTGCCATTTATTCAAGCTTGATGTCACAGTGCTCATAGTGA
>TU18974
aagcataattattttttatttattatacactgATTGAAAATGCAATCTTACAATATTAGCATTCAATAGATTAAGATAGAGATcgatttttctttgtgtttctacTTAATTATTcttgatttaattatattttaattttaattaatattttactgttactgtttttttgtaattattactgGAAAATTGTTTCTACACCATTTGTTTCAGTCTACTAACTATGTTCAGAAACTCTTGGTCAgacaggaattttttttttcttactcagACTTTTCTTCTGGATTgtaaaaatcatcaaaatagCCCTCAGCGGCTCTGAGCATCTGAACCACAGCATTCAGAAGCAGTATGTCAGTTTGAGAGTCTATTTCCAGTTCTTGGTAGTAGTTTTTCACTGGGACCACAGCAGACAGAGAAACTCCAAGCTTAGTGCTGATCTCCTGCATCTGTCACAAAGTAATTCATCAAGACAACATGtgaaacaaacacattacataATACTTAGGCTACTACAAAGTTCTGTACATTCATTCATACCATTGTGTTGATATAGTGGCTCTGGTAGACATTTTTCACGTCTTCTGCCACTAAAGGACAGGCCTCATCCACCTTAGTAAGCAGAACCAGCTGAGGAATAGCTGAAGTAAAGAACAACACTTTATATGCTATCACATCACAGAGACCACCATCCTATCCTACCCAGTGAATAAAGATTCATGTTAGTTGTACACTCAAACCCCACAAGAGGTTCTATGGAGCACggaatttaaagggacagtccatCACAACAATCCTGTAATTATTTAGTCACtgttatgtcattccaaacctctGTGTATTTCTTTCAACTGCTTATAACAAAAGAAGATCATTTAGAACAATGTATAAGTGTACTGAAGACTGAATTTCCATAATTTAATCTGTATAACACACTCATGTCAACTGAAATTAATTCAAATCTGTTCAAAATTGTTACGCACATAGATGGTTGGCTTTCTTTCGAAAAGCCACAAACTTCTCAATCATTTTGTCAGGCAGGAGCTTGACTCTGCTGATGTCAATCACGTAAACCACACAGTGAATCTTGTCCTTCAAGCCAGGAGATTTATTGAAATGAGGGGAGCCTGGCTGTATAGGCACTAATGGGTTAAACTAAAAAAGGAGAAAGACAGAATTTTTAAATCgttaagaaagaaaatattgaataaaagtTGACATTGCAGACCTATTAACGACTAAGTTTACACTGTAAGTTCTCACCTGATACTTGTCTTGAACGTGACCTTTCAAAATACTGGTAAAATCCTCTACATCTAGACCAGAGTTTTCACCGTCCTCCAGACCCATCGAGTCACACAGAGTAAAGGGGACATGGGTGACACTGTTGCTTGGCTTGATGTAGTAGGTACGGAACTAcatgaaacaaatatttagcaATCATTTCCAGTATACACTTAGACTAGTTATATTATAATtgcacaactgtataattagtCACAATTCTCACAAAATATCTGACACTGTAAAACATCAGAAGATAATAAGGACGCATGTCTACCTGAGTAGTCAAACTGGTGCCAGCAATGCCAGTGTTAGCCTGAATGCTCACATAACCTTTGAACACAGAGTTGATGGAGTTGAAGAAGCTTGATTTCCCAGCTCCTACTGGACCCACCAAAAGAATCCGAGCCTGTTTGACTGAGTTAACAGAAGGCTTCCAGCTAGAGATGGTGCTCAAGTGTGCCTGTCTCTTcctaaaacattaattaattaccaTTAGCAAATTCCttaaagagttagttcacccaaaaaggaaaattagcAATTAGATTAGTCTCCTCTTAGAATAATCCTCAGACAATTTTCTTTATAAGTCCTTGTTTTGTGCTTCTAATATGTgacctgcatttttttttgtcctccaCATTCATCGCTAATCATGAAACTCGTCTTACATAATCTGCCAGAACTGCTatggaaggtttttttttaacagataatGCACAGATAATGCATATACAATGGCACTGATAAATGGAAATAGATCAATATTAAGGAAGGTACATACAACATCAAtgcaaaatatcaataaatttgcatatattctgagaaagaaagaaaaagaacaagtTTGTAGGAAGTGCtggtaatgcattttattcatccTCAGGAGCCACGTGAAGGACGTTTTATCACAGATACGTCtactttatttaatgtcttCCAAAATGTAAcagcaaacacttttttttagtcCCATGGAAAAGCTTGAAGGAGTCGTGTTTGGTGCTTGCACATCAGTGTCATTAATCTATAATTTCCTGATTTTAgccattactcatgggttttgaatTAATATCAggatgtgcgtgtgtgtgtgtgttcactgatCTGTGTGCGCACATgaatgggttaaatgcagagcaaaATTTCCAAGTATGAGTCACCATACTTGGCCATACGTCACTTCACACTTTTAATTGGTTATCGCTAAATAATGAGTTCAGTTTACAGAAGATAGTGCATTTGGTTTGCTTTACTCACTCAGAGTTCCACTGCACATTTCTCCATGGTTTCTCCATAAGTCCTCTGCTATCTAGGGAGAATTTAGTCCAGAATACAAGTTACTCACAAAACCTTTACATTGAGTAAATTACCCTCTCAGCAATTATCTGAAAACAATACAAACCCTCCACTCTGTACACCTCACATTCTGCCAGCTGTAAGTTATTCCCATGCATCTTCTGTGGAACAAACTGGTATGTTCCTGGATTACTGTGGACAGTGGCTGTATTATTGTGAAGAAACACTAAAGAGCCAAAGTTTGGACCATTGTCAGTAAAAGCGTACTGGGGATTTCCACTGACAACACGCAGAGGATCCTCTTTCATTTCTTTGTCATTAAAGCTAAAGAGAAAAGCTTTGTCATCCGCAGTATTTTGGTTGGTTTGGCGGAAATCCTTGCTAGTGAAAGCTCCAAAAACGTATCCAGCCTTATTGTAAGCTACAATGACAGTTGGTCCCTGCATATTGCACTTTTGGTGAAATGCAGCAGCAGTGAACCCATGCACACTGGCTTTGAACAGCAGGCAGAGGTTAGCATGGTTGAGCAATGAGCAGAGCTTATTCTTCTGCCATTTATTCAAGCTTGATGTCACAGTGCTCATAGTGA

Function

NR:

description
PREDICTED: interferon-induced protein 44-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18971 True 3189 lncRNA 0.37 2 16844342 16847554
TU18974 False 3172 lncRNA 0.44 2 16844342 16847554

Neighbor

gene id symbol gene type direction distance location
nmnat2 nmnat2,LOC107658365,LOC107563562,LOC107678925,LOC107557267 coding downstream 145719 16688625 ~ 16698623 (-)
tnn tnn,tnw,LOC107722078,LOC107658358,LOC107678933,LOC107726927 coding downstream 359138 16457757 ~ 16485204 (-)
brinp2 brinp2,LOC107658350,LOC107562711,LOC107722070,LOC107720848,LOC107700985 coding downstream 819692 15948412 ~ 16024650 (-)
cenpl cenpl,LOC107720853,LOC107599910,LOC107657424,LOC107722063,LOC107700989,LOC107557192 coding downstream 984251 15856239 ~ 15860091 (-)
eif2b3 eif2b3,LOC107722074,LOC107599900,LOC107700990,LOC107720854,LOC107558289 coding downstream 1011169 15803479 ~ 15833173 (-)
LOC122356645 LOC107709317 coding upstream 137 16847691 ~ 16849363 (-)
LOC122324462 LOC107709317 coding upstream 4383 16851937 ~ 16852961 (-)
LOC122327065 NA coding upstream 8561 16856115 ~ 16856779 (-)
LOC122327073 LOC107709317 coding upstream 9907 16857461 ~ 16858067 (-)
LOC122355552 LOC107709316,LOC107577925,LOC107658332 coding upstream 11014 16858568 ~ 16859696 (-)
LOC122356651 NA non-coding downstream 7695 16834834 ~ 16836647 (-)
LOC122356623 NA non-coding downstream 19540 16823258 ~ 16824802 (-)
LOC122356666 NA non-coding downstream 21794 16819837 ~ 16822548 (-)
LOC122356638 LOC107558522,LOC107726897,LOC107558467 non-coding downstream 42391 16800431 ~ 16801951 (-)
LOC122356677 NA non-coding downstream 48564 16794348 ~ 16795778 (-)
LOC122328563 NA non-coding upstream 28343 16875897 ~ 16876346 (-)
LOC122327095 NA non-coding upstream 34223 16881777 ~ 16882345 (-)
G12864 NA non-coding upstream 45232 16892786 ~ 16893100 (-)
G12868 NA non-coding upstream 52090 16899644 ~ 16900070 (-)
G12881 NA non-coding upstream 75448 16923002 ~ 16923439 (-)
LOC122356633 NA other downstream 12950 16828935 ~ 16831392 (-)
LOC122356641 LOC107678904 other downstream 15812 16826321 ~ 16828530 (-)
G12843 NA other downstream 17769 16826139 ~ 16826573 (-)
LOC122327057 NA other downstream 17795 16826085 ~ 16826547 (-)
LOC122327046 NA other downstream 18534 16825002 ~ 16825808 (-)
LOC122355584 NA other upstream 13478 16861032 ~ 16861844 (-)
LOC122327077 NA other upstream 15374 16862928 ~ 16863490 (-)
LOC122355559 LOC107709313 other upstream 19197 16866751 ~ 16867660 (-)
LOC122355567 LOC107709307,LOC107709313 other upstream 20543 16868097 ~ 16873019 (-)
LOC122327088 NA other upstream 22671 16870225 ~ 16870796 (-)

Expression


Co-expression Network