G12975


Basic Information

Item Value
gene id G12975
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17182184 ~ 17270444 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU19161
tttttttttttttttttttttttttttttttTCCAAGATAAAAAGAAAcgtttattgaaatattacaaatgagaCAGGTCATTGGATCTCTTATTTACATCAAACCGTAAACAGCTTACATACGTTCAGCTATACTAAGTTCTTATGCAATGACATATGACTTTGCAGtgccataaatatataaacatacaatgCATCTGTAAATGAAAAGATCACAGCTATTAAAGTCTATTAAATATTCAACTAAACATAATGGCTTTAGAAAATGGTTTTGAAAATGCAACATCCTGTGCCGCCACAGGGAGGCTACAACGTTCTTTGACAAGAACTACTTCGGTTTGACAGCCATTCAGCCTGAAAGAACATTAGTTATTGGATTCATATTCAGAAAGGATCTGCACAAGTTAATCAGtatgaatgaaaattaaacacCATTTTGAGCTACAGGGAATAAACCACATTCAATCTTGGTTGTTAAAGTGTACAATGTCGTCTATAAGAGCACACAAAACTGACTTCCAACATGTTAAACGGACAAAGCATGGCTTCCCATAAGGTTTACTATAAATGAGGAACCACTGACAAACCACATAGAAAACCAAGCTTTGTCTGTTCGTAGATAGATAGTTCGTGGTCAATTTAGCTAACAGCTACAGAGTtaaacacaaacgcacacaaaaaaaaaaaaaaacttacacaTTTCCTGCGATAATGTGCATTTCAAGTTCAAAAATGTGGTGgatgattttatttctgttacttAAACTATTTAGAAATGGATGAATCTACATAAcctacagtaaaaattaaatgttaatgtttttcttaatatattgtaataataataataataaacatacaaaatatactATGATGAATCAGATCAGTTATTTAGCATGTTGTGAAGCGGTCAAAACAATTCTCTAAGAAATACTGCCTCCATAACAATGTTTCGCAGTCATACTATGACATTTAAAGTTAGTCAAATGTTTTGTTGACATTAAATTGCAAGTAATCCAGGCTAACCTCTaacaatgatataattaataataataataataataataataataataataatatgaattcataatattattattaatatttctcagGTAGCGCATGAGCTCTTATTGCAATGTATAATGAAATCTGTAAATCTATGAACacagaaatgtgaaatgtaatgtaaaaataacccCTTTTCAGGAAGTCAGAATGGAATGTGAATTTAACAGACAGTGAGGTTATATGAGTGTGTGACTTGATGTCTCAGTTCTCTGTTTCTGATGAGTCGCTGGCATCTGTTAGACGTGTTTGCTTCTTGCGGACGTTCCAGTGGAGACACTGAGCCAGACTGTCAAACCAGTCGTACACCAGGTCATGACAACAGATAGAAGGGACCGGAAAGCAAGAGGTTGTGATCTTAATGCTACAAtggaaaaaaaccaacaacaacaacaacaactcatGATTAACAGACAAGAGTGTCACCTGTCCCCGTGCTGGATTTCCTGCCTCTTTCTGCCATCAAACGAGACCCAGGCTGTGTTACGAGCATCAGGCGACAGCGTTATCTGCATGGCACCACGATGGGTCTAAAAGAAAGCGAGTGAGGGCAGATGGGGGTGACCATGATGGCAGGGACATTAGGGTGGATCATGGACGCTCCCGCCGCGGCAGCATAGGCCGTGCTGCCTGTGGGGGTGGAAACTATTACACCTGCATAGAAACATGCCACATATTTGCATTGATTTTCATCTGAACATTAACATCTGCTTAAGCTAAGAGGTAAAAAAAAGATCATGAagcaaatctaaaatatttattgtgtatcgTGCAAAGAGTATCACAGCTACACTACCATTCAAGAGTCTGTTGTC

Function

GO:

id name namespace
GO:0044281 small molecule metabolic process biological_process
GO:0019674 NAD metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19161 True 1883 lncRNA 0.36 4 17182184 17270444

Neighbor

gene id symbol gene type direction distance location
gadd45bb gadd45bb,LOC107738256,LOC107591447,LOC107706329,LOC107559165,LOC107659370,LOC107684432,LOC105906135 coding upstream 35119 17145373 ~ 17147065 (+)
rabgap1l2 rabgap1l2,LOC107706404,LOC107659372,LOC107684408,LOC107559133,LOC107591424,LOC107738216 coding upstream 53825 17124781 ~ 17128359 (+)
fam163aa si:dkey-193b15.8,LOC107591327,LOC107684409,LOC107738190,LOC107706402,LOC107557375,LOC107659374 coding upstream 59120 17109566 ~ 17123064 (+)
nrd1a nrdc,nrd1a,LOC107738192,LOC107684410,LOC107706405,LOC107659423,LOC105906141 coding upstream 76217 17094184 ~ 17105967 (+)
pdcd10b LOC107684411,LOC107557361,LOC105906142,LOC107706406,LOC108411198,LOC100709687 coding upstream 137411 17040002 ~ 17044773 (+)
gpr160 LOC107738252,LOC107684395,LOC107591343,LOC107706324 coding downstream 6406 17276850 ~ 17280393 (+)
phc3 LOC107738171,LOC107591347,LOC107557539,LOC107706383 coding downstream 63252 17333696 ~ 17343059 (+)
myadmb si:dkeyp-66d1.7,LOC107706376,LOC107668989,LOC107591450,LOC107738251,LOC107659403,LOC107557715,LOC103040076 coding downstream 203094 17473538 ~ 17478940 (+)
ftr66 ftr66,LOC107668987,LOC107591451,LOC107706375,LOC107659402,LOC107557692 coding downstream 210260 17480704 ~ 17485854 (+)
ltb4r2b LOC107668991,LOC107738160,LOC107706371,LOC107659397 coding downstream 230899 17501343 ~ 17506122 (+)
G12972 NA non-coding upstream 19212 17161176 ~ 17162972 (+)
G12823 map1sb,LOC107738188,LOC107659421,LOC107591330,LOC107684407,LOC107706295 non-coding upstream 47296 17133077 ~ 17134888 (+)
G12818 NA non-coding upstream 58817 17123139 ~ 17123367 (+)
G12782 NA non-coding upstream 203428 16950834 ~ 16978756 (+)
G12784 NA non-coding upstream 215082 16958408 ~ 16967102 (+)
G12977 LOC107706390 non-coding downstream 2210 17272654 ~ 17273162 (+)
G12995 NA non-coding downstream 10816 17281260 ~ 17285830 (+)
G13007 insra,LOC107591352,LOC107558844,LOC107706379,LOC107738166,LOC107668948 non-coding downstream 115618 17386062 ~ 17387548 (+)
G13075 NA non-coding downstream 209280 17479724 ~ 17480102 (+)
G13076 NA non-coding downstream 209779 17480223 ~ 17480494 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other upstream 142281 17032139 ~ 17039903 (+)
LOC122361622 NA other upstream 405833 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 725652 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 913387 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 1306420 15860179 ~ 15875764 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 91801 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 296397 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 336808 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 508895 17779339 ~ 17782364 (+)
G13137 NA other downstream 513735 17784179 ~ 17816764 (+)

Expression


Co-expression Network