G12982 (diras1b,LOC107659419,LOC107591332,LOC107557388,LOC107684404,LOC107738254,LOC108236225,LOC103373792)


Basic Information

Item Value
gene id G12982
gene name diras1b,LOC107659419,LOC107591332,LOC107557388,LOC107684404,LOC107738254,LOC108236225,LOC103373792
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17187117 ~ 17190607 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU19169
tttcaatcattttattatgaaaatcgATTTGCAGATTTATTAGAGAATATTtgcaggtatatatatatatatatattagtacgTATTCTCCTTCATTTGGGATGCGTGGGCACAGCATACCATGTCTTAGGAAGACTATTGCTAAAGGACATATCATACACAGTAGTAGCTAatagctataataataaaaaaagaaaaaacttttgtaaaatattgtacaaaaaagaaaataataaaatgcagagTTGAAAAGTCACTTCACAGTTTTGTTGCTTGCCCTCATGCTGGCTAAACATCAAGTGGGACCATGCGCAGTTTGATTTATGAAATGGAGGTCGTCATTTACATATGTTTCACAGTACATTCCATTACCCATAGGCATTTAAAGTGCTCACTGTGTAAACCAGATTTAAGATAccagctgaaaaaaatgcatgaagatAATCCAGATGTATACACAAAAGTCCCCTGGGATTCCAACCAAGCACATGAAGAGCTTTCAAAGGAATTATGTCCATGTTCATCCGACAAGAGTCAGTGCAGTGTCGTATTCTTTACAtacaatttacaaatatatacaatcaAATGTGCATGACATGGGTTCAGAAAATGATGTTATAAGCAGAACTGGTGGACACTGGCATTGCGGAGGCAAGTCAAGCGAAAGGACGGCAGGTAGCTGACACTCTACAGAGAGCGCAGACTTCCCATGCATGTAAAATGCAAGGCGCTCTGCAGTTTTCCTCTCGTGCAGCTTGCAGTGGCTCTGATGGTATCAGCAGCGTGACTCATACGCCAGCTGAGTGGGCTTTATAGAGATTGGATACGTAGATTCAGGTATAACGGATTCCAATAGAGTCGCGATAGATGGACTAGGCGTTGTTCTGAATTTAGTAAATTACGAAGTCATAAATCAGCAAACTCTGCAGAGTGATAAAAGGGGGGACTTTTTATCATGATATGACTGCATAAACTACGCAGAGCAAAACCGCTGTCACCAGTAGAGAGGTGGTAAATTATAGCACCATTTTAAGGGGATGAATGTGTTGGTGAGGCATCCAGggaactaatattaaaatattaatcatcaTAATATTAACTGACAGCTGATAAACTATTGCAATGCTTGTCACAGTATATCattagtatatattatagtCACTGTATACAGGGGGTGGGGTATTATATTCTTCTACTCATTTATAATGCTATTTTTCTACCTGcgccaaaataaaatgtatggtTTTACTCATGTAAAATGTTATCATCCATATGAGTGTTTAATATACCTAGCTTTTTACTATATGATTATAATATGTCACCATAACTGCTTCATTTCTTGCTTAAAGTCTAACAAAGTAAACTATGTGAATTTGGTCTTTtctgtattatagttttctgaaatgttgtATAAAGCTTTCTTTTATACTCATTTCTGGTGTACCCTGTTCAAAACCTAGGAAACCAGCACAGCATGGATAAATAACATCAGATGTGTAAAGTACAacctaaaaacatattaaagggGCTCTTTCTCATGTCATTGTACAAAGGCAATCAGctggttaaataaaaatgtaatgctatACAATCAAGGCCCTTTTGAAGCATTTCTTTTGTTAAAGGCTGATTTGCGGTGCGATTGCATTCTCTTACCTTCCTATAAGGGTCACTGAGAACACAAAAACTGAATAGTTTCAAGCCAAAATATGGATGGGGGGTTTCATCCTAAAACTCTAATCACTTTAGGTGGCCGTATTATATAGCCTCTATAAATATGGTAGAAGACTTGCTTCCTCAATTTGGTTTTGCTGCCAAAGTACACCTCCtgcaaaatgcattcatttcctGATTGAAGACATTTGTTATTGTCTCATTTAAAcagttataaaatataacataaacataacaaaaagaAGATGGAGATTCTGGCTCACTCCAAATTACTGGGGATGCCAGAAGTGTCTCAATTTTGAGCAACTGCAAAGCAGAGATGACGAGGAGTGCTTGCTGCTTTACATAAACATGTGCGCATCTGCATGAAATATGAAGTATCTATATGCTTTCAGATTTTTGATCTGCCTTGATGTCACTGCATggaaataattttacaaagcattACGTGTGCTGttaatgtttaacaaaaaatcATTGTCCTAAATATTGATTGGTATTTTTTAAGATGTAATGACATGCAGAACTAATCATCCAAAGGTTATGAGAACAGATAAAAAGTTGATTCTATACAacctgtaataaaatattaaagggtGGTTTGactatattgttatataatctTATACTGACGCTACTTGCtcaacatttgaataaatatacaaaacaaaagtttaaatgtcATTAGTCTTATGTTTGGATATCACAGCTGATATAAAGCCTGACTCTGCTTTAGCTATGCAGGAGcaaccatttaataaaaaatatctgcatCATGAACTCAAAAAGGGCTATTTAGCATGCGATAACAATGCTGTCTGAATGTTTCTGAATGTAATAGAAACAGACAAGGCAATAGGATCAGACCAGTGCTTGTTAAGGCCAAAGACTGATGGTGAAAGATGAAATTTGAGATGTCAGAGTAAAATCCTTGTTATCGGAAATAAGCATGAAATGTCAAATAACaccatttccattcattttcccCTCCTCAGCTCCTTTCCTTTGTTATGTTATCACTCTATCTCTCAGCTTTATCTCACTGTGTCTCTAACAAGCGCTCTACATGACGCTGCATTTCCCCTTTAGCTTGTCAGCCCTGCTTTGCTTCCCAGAACGCTTGCCATCGATGTTCAAACTCATGTTCCTCTTCTTCTCCAAGTTGAGAAGCTCCTGGAAGAGCTCGGTGACGTTGTGGTTAGTCTTAGCCGAGGTCTCCATGAAAGCACACTTCCAGATCTTGGACTGGGCCTCTCCATCTTCGGTCTTCACTTCCCGTTGAGTCTCATCACTCTTGTTTCCCACGAGCATGATGGGGATGTTCTCTACATTGCCTTTGATAGCGAGAATCTGTTGGTATATGGGCTTTAATTCTTCCAGGGATTGCTTACTCGTGATGGAGTAGACCAAGATGAATGCGTGACCCTTGGAGATGGACAGACGCTGCATGGCAGGAAACTGGTGGCTGCCGGTTGTGTCTGTGATCTGAAGGGTGCAGACGCTCTTGTCGCAGCTGATCACCTGCCGGTACGTGTCCTCCACCGTCGGGATATAGGTGTCCCGGAAAGTGCCTTTCACAAAACGGAGCACCAGGGAGCTCTTGCCCACCCCGCCTGCTCCAAACACCACCACGCGGTAGTCGTTGCTCTGCTCGGGCATTTTGGGCCTTCAGCTGCGCCACACACTTTCTAGACCTAATAGAACGAAAAGAAAAGTTTAGTTGATTGTGTAATGTACTATAGCCTATAACAGgggattttgaacattttgat

Function

symbol description
diras1b Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Acts upstream of or within neuron development and trigeminal ganglion development. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in brain; diencephalon; hindbrain; retinal ganglion cell layer; and telencephalon. Orthologous to human DIRAS1 (DIRAS family GTPase 1).

NR:

description
PREDICTED: GTP-binding protein Di-Ras1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19169 True 3446 lncRNA 0.39 2 17187117 17190607

Neighbor

gene id symbol gene type direction distance location
gadd45bb gadd45bb,LOC107738256,LOC107591447,LOC107706329,LOC107559165,LOC107659370,LOC107684432,LOC105906135 coding upstream 40052 17145373 ~ 17147065 (+)
rabgap1l2 rabgap1l2,LOC107706404,LOC107659372,LOC107684408,LOC107559133,LOC107591424,LOC107738216 coding upstream 58758 17124781 ~ 17128359 (+)
fam163aa si:dkey-193b15.8,LOC107591327,LOC107684409,LOC107738190,LOC107706402,LOC107557375,LOC107659374 coding upstream 64053 17109566 ~ 17123064 (+)
nrd1a nrdc,nrd1a,LOC107738192,LOC107684410,LOC107706405,LOC107659423,LOC105906141 coding upstream 81150 17094184 ~ 17105967 (+)
pdcd10b LOC107684411,LOC107557361,LOC105906142,LOC107706406,LOC108411198,LOC100709687 coding upstream 142344 17040002 ~ 17044773 (+)
slc1a8b slc1a8b,LOC107591333,LOC107706395,LOC107557414,LOC107738183,LOC107659353,LOC108444332,LOC105889468 coding downstream 21269 17211876 ~ 17219198 (+)
pex19 pex19,LOC107591335,LOC107684402,LOC107659417,LOC107557446,LOC107738253 coding downstream 39273 17229880 ~ 17233863 (+)
copa copa,LOC107591337,LOC107684398,LOC107706393,LOC107659416,LOC107557408 coding downstream 43451 17234058 ~ 17244433 (+)
apoda.2 apoda.2,LOC107557457,LOC107706325,LOC107591449,LOC107684429,LOC107738179 coding downstream 57328 17247935 ~ 17249242 (+)
samd7 samd7,LOC107591340,LOC107557490 coding downstream 62625 17253232 ~ 17259748 (+)
G12972 NA non-coding upstream 24145 17161176 ~ 17162972 (+)
G12823 map1sb,LOC107738188,LOC107659421,LOC107591330,LOC107684407,LOC107706295 non-coding upstream 52229 17133077 ~ 17134888 (+)
G12818 NA non-coding upstream 63750 17123139 ~ 17123367 (+)
G12782 NA non-coding upstream 208361 16950834 ~ 16978756 (+)
G12985 NA non-coding downstream 13807 17204414 ~ 17206481 (+)
G12977 LOC107706390 non-coding downstream 82047 17272654 ~ 17273162 (+)
G12995 NA non-coding downstream 90653 17281260 ~ 17285830 (+)
G13007 insra,LOC107591352,LOC107558844,LOC107706379,LOC107738166,LOC107668948 non-coding downstream 195455 17386062 ~ 17387548 (+)
G13075 NA non-coding downstream 289117 17479724 ~ 17480102 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other upstream 147214 17032139 ~ 17039903 (+)
LOC122361622 NA other upstream 410766 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 730585 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 918320 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 1311353 15860179 ~ 15875764 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 171638 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 376234 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 416645 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 588732 17779339 ~ 17782364 (+)
G13137 NA other downstream 593572 17784179 ~ 17816764 (+)

Expression


Co-expression Network