G12995


Basic Information

Item Value
gene id G12995
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 17281260 ~ 17285830 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU19186
GTTTGACACTACAGAACTTTACTTGAATTGAATCCAAGTTCATTGTCTATACAAGATATATTTACAATGTCTGAAATAGgggaaataaacaataaaacactagATACAACTGAGGTATTAGCTAAAAGcatgtacatgtatttaacttGTAAATATCAATCATGATAAACAGTTTGAGATGTGTCATCTGCTTTAGAAAACATCTTATCACAACATGAGGTAGGAGAGCAATGTCTCATTTTCATGCAAGAGCAAAAAACCTTTCATCACACTGTAGGATTGGCAACATATGCAatgatacacacaaacactgcatttCATCTCAGAATTGCAACTTAAAATTTCTTTGCCGTTTACAAAAGTCGTAAACaatgatattgtttttattacagtgttGACTGTtctcaaaaagaaaagaaaaaaaaagcatcacatctgttgttttctttcgttttttAATAGTAACGTCATTACACATTAGAAAAGGTGTGATTAAGATCATAGGGACACATGCTGCGCTGGCAGGTAGTTATTTGTATACTACGTGtatttttccatatatatatatattattataaaaaattatagaattgtcttttctcttttgCCATTAATCAGCTCAAGGGAGCCACAGTAATCATTATATCCCCTGTAAAATGGGATATTTCCTCTACAATGCAAAATACATAATAGCTTTGATGAAAAACTCTAGCATTAGATTgtttaaagtacaatttttgCTAATTATAATATACCAGGCCTATACATAACAGATATTTCACACCTCTCGAATATGTACAACGTTATCTGTATTCATTTTCTTAACACTGCAAAAGCCAAAAACAGGTCTGTTGTTTCAAGAGTCTAAAGAGTACTGTATTCCTATGCCCAGAATTCAAATTTAACATGGCATTCTACATAGAAGATATACAGTGCCCCCCTGTGtacaaaatgcaatttacaGGTTTCATAGAATCGTTACAAATGAAAAGGTATACTCTAGAAAGcttcagaaatacattttaatacccAAAACTATCAAAAACAGCATTGAAACTGGCTGCTACAGAGGTAACTGTGGTGAAAACAAGAAAACCTAACACTGATTGTACAGAAATTGTAGTTGACACTGTAGTAATGCATTACAGTGGCAAAACAAATGCTACAATCTCTTAAAAGAACTACACATGAAATCAgagcgctatatatatatatatatatatataatataaacaaaaaaatgcattgctcctttcaatacacacacagtctctcatATCAAATGTTTCTATCATCTATATTAGGCTCTTGAGCACATTTTGTGCCCATTTACATAAAGACTACTCTTCTCAGACAGAATGGAGTAACGTTTTTGGAAAGGTTGTATGtgtgagagtaaaaaaaacgtCTGCATTTTACCAAtaatgaatctgtgttttagcaTAACAATATAATAGCTAAGAATACATGCATTATTTCACTCCCTTCTTTCTAtgaattttaaattctttttttttaatatatatatatgtatggatGTATGCAAGTacgtatgtgtatgtgtgcgtgtattatatatatatgtacatacatatacacacacacacacatatgcacacacatataaaaaaaagtggggAAGAGGAAAAGCTGAGCACCCCCAAAATAACAACAGGCTGTCAATCTCAGTGGGCACCTATGAAATGGACAAAATGATCCACTGAAGGGAAACACCGAGGCACTGGACAGCTAACGTCACCGTTTCCCTTCCCCGTTGGATGGAGTGTAAGGGTTCTGAGCATCATGCATCCCTACACCGCCTTACACACTTAATCATCACCCACTCTtcaagcaaaacaaagaaagaaaaaaaaacaactgaaaaaacaatAGTGCTTGGGCTATGCCAAGCTTTTGCAAATGTGATCAGAAACCTTGAAAGATTGATTATAAGaatttagttaatatattaatgacTACCGTATGTACAAAGTGTATATAAATCTttattagttaatacattaaataatttctgaataatttcaagaaaaagttcaaaaatgGCAAAGCACTCATTtacaatatagtttttttttcttctcgatTCTTCATAGCTGGACGTATTCACATAAGTCAGGGTGTTTCTTTACGTTCTCCTCTTTTGCGTCCAAGAGGTTTTGCACTGTACACGTTATCAGGTTTAGAAAACTGCTGTGGCTTGGCTGACTGTGAATCCGATGAGTTGTGCACAGTGGAATGTACGAGAGATATGTACATCACGGAACGAAAGAGGCCTAGATTTACGTCCAACATTGTTCACgcaacagaacagaagaaaaaaaaagaaaggaaggacGTACTGGTCTAGTGGCAAAACCACTTCACTTTCTGTGTCCATCTTTCTTCATCCATCTAACAGCTAATGTATGAGCGGGCATCGTAGGCAGCTGCCCCATTCTGCAGAGACAAAGCGTGCCTCTTCAACCCTCGGTGACCGGGAGCTAACGTGACAGAATTAATTCCTTCACGCTCCTCCCTTGGCcccctgtctgtttttcttctccCTGTCAGACCTGTTTGCTCACTCATCCAAAATAACGACACAGaggaattaataaaaaattcagGCTAAACACCCAATACGTGACAACCTAATCGTTTACCCGACATTCAAAAACTAGGTACTTTACTAGCAGTACTCGGATGAATAAAGAAATCAGCTTTAGGTTAATGGGAGATTGTGACGCACTTCAATGCTTTACATCAATTGCACTACTAATGTTTCCTTTGcttaaaaaaaggacaaatataAGGTCTACTGTGTGCTTTGTTTGAAGATTGGATCTCGGAAGATCGATCTTGCAATTTCTGAGTAACTACAAGCGGTATGCTTTTATTGGTGCCGCAGGAACCCTTTTATGGTCGGAAAAGAAACTTCAGAGTGAGGTGGACTGCACTATcctgaagctttttttttgtataaccGCCTGTAGTTAAATAGGAGCAGAGTTTAATAGTGTTCTCCAGCAGGGGGCGAATGTGAGTCATTGCTTACAGCATCTAGCAGGAATGAACCGAGCTGTTTGTCATACACCAGCCTGCAAAGGGTCAGCAGTGCAGACAGGAAATATATAATCAACACCAGACTGAAAAGACAAACGGCAGGCagggagagaaaaaggagaggaagaggggGAGGATTATGATGTTAAACTGGGGGCCTCAGTAAGGGGCCCCTCTACGTCTCCGAATCGTTTGTATTTAGTTTGATGACTTAAATATGCTATAGAATAATATTTAGCTGATATCTTTGTGACAAAAAACTCCCATTTTTTCTGTAGGAAACGAtacactaaattaaaataaagaagtaAACATCCACTTGGTTTCTTGCTGCTGCAGGGCATTGGCGTCTTGCCGTTTGGCATCCTTGGGGTTTGTGTCACAGGTAGTATTTTAGTCAGTTTCCTGTATCCAATGAGCTGGGAGCAGAAAAGCACTCGAGTGCTTTCCCAGCACCACAGGAGGCAAGAAGTCCAACAAAGAAATGCCTCCACCGTCCCATCAGCAcgactaaaataaaacaaacatgtacATCTAAAAAAATGCTTAACGACTGGTCGAGGGCAGGGTGATACGAAAAGTctttaaattaaacacaaagtgaagtcttttttttttttttttttttgtggtggtgCGGCACAAACGGAAGCAGTTATGGGAGAGCTGCTCTTTTCTGCAGAGGTTGCCTTGTGTTTGTCTGTGACTCTGCAGGGAGTGGGTGAGCGTGATCCTGGGCTACAGGCTTGGAAGTGTGCGAGGAGGGGGGTGGGGCTGTTTATCTGGAGGTTACCTCAGGGGCCGGTGAAGAGAGGGAATGCTGGGATTGGGGGCTTGCGGAAGGGGTCGGGGGCTGGGCAGGGCTTGTGCTGCGGCTCCCCTTGGTGCCAGACTGGACCATCTGCTGCTGAAGCTGCGAGATCATGAGCTCCAGCTTCTCTCTGGCCTCCCGCTCTCTGCAGAGCTCCTCCTGCAGTTCCTGCCGCTCCGCCTCGGCACGCTCCAGACGGCAGCGAAGCTCGCACAGCTGCGGACAAAACGACAGTGTGGTTACTAACAGGAATGCACaaaaattccattaaaaaaaaaatctgagtaGCAGTGATTCCTGCAGTAAATCTATAGCGCCACTTTAAGATTTCATGTCCGCACGTGTGAGTGATTTGAGAGGTTGGAAAGAACGGTTCACTGGATACTGTGCACACGCTGAACGCGTCTATTCATTCTCACGGGGTAAAAGAGTATACTTTGAAAGGTTTGCATGCTGAACTGTGCATACAGCCAAGCACACGCAGAAAATAAAGTATATCTGAGCCTTTATGAGTCAAAAAGGCTCACAGtcacaaattattttaacaaacccAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19186 True 4428 lncRNA 0.38 3 17281260 17285830

Neighbor

gene id symbol gene type direction distance location
gpr160 LOC107738252,LOC107684395,LOC107591343,LOC107706324 coding upstream 867 17276850 ~ 17280393 (+)
sec62 sec62,LOC107684396,LOC107738178,LOC107706392,LOC107659352 coding upstream 13181 17260811 ~ 17268079 (+)
samd7 samd7,LOC107591340,LOC107557490 coding upstream 21512 17253232 ~ 17259748 (+)
apoda.2 apoda.2,LOC107557457,LOC107706325,LOC107591449,LOC107684429,LOC107738179 coding upstream 32018 17247935 ~ 17249242 (+)
copa copa,LOC107591337,LOC107684398,LOC107706393,LOC107659416,LOC107557408 coding upstream 36827 17234058 ~ 17244433 (+)
phc3 LOC107738171,LOC107591347,LOC107557539,LOC107706383 coding downstream 47866 17333696 ~ 17343059 (+)
myadmb si:dkeyp-66d1.7,LOC107706376,LOC107668989,LOC107591450,LOC107738251,LOC107659403,LOC107557715,LOC103040076 coding downstream 187708 17473538 ~ 17478940 (+)
ftr66 ftr66,LOC107668987,LOC107591451,LOC107706375,LOC107659402,LOC107557692 coding downstream 194874 17480704 ~ 17485854 (+)
ltb4r2b LOC107668991,LOC107738160,LOC107706371,LOC107659397 coding downstream 215513 17501343 ~ 17506122 (+)
sdr39u1 sdr39u1,LOC107668982,LOC107738159,LOC107557702,LOC107659398,LOC107591428,LOC107706372,LOC107579374 coding downstream 222956 17508786 ~ 17511815 (+)
G12977 LOC107706390 non-coding upstream 8098 17272654 ~ 17273162 (+)
G12975 NA non-coding upstream 10816 17182184 ~ 17270444 (+)
G12985 NA non-coding upstream 74779 17204414 ~ 17206481 (+)
G12982 diras1b,LOC107659419,LOC107591332,LOC107557388,LOC107684404,LOC107738254,LOC108236225,LOC103373792 non-coding upstream 90653 17187117 ~ 17190607 (+)
G12972 NA non-coding upstream 118288 17161176 ~ 17162972 (+)
G13007 insra,LOC107591352,LOC107558844,LOC107706379,LOC107738166,LOC107668948 non-coding downstream 100232 17386062 ~ 17387548 (+)
G13075 NA non-coding downstream 193894 17479724 ~ 17480102 (+)
G13076 NA non-coding downstream 194393 17480223 ~ 17480494 (+)
G13049 LOC107738153,LOC107668935,LOC107591359 non-coding downstream 241347 17527177 ~ 17529390 (+)
LOC122357958 NA non-coding downstream 324320 17610150 ~ 17612100 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other upstream 241357 17032139 ~ 17039903 (+)
LOC122361622 NA other upstream 504909 16724614 ~ 16776351 (+)
LOC122323293 NA other upstream 824728 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 1012463 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 1405496 15860179 ~ 15875764 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 76415 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 281011 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 321422 17607252 ~ 17608092 (+)
LOC122325453 LOC107668965 other downstream 493509 17779339 ~ 17782364 (+)
G13137 NA other downstream 498349 17784179 ~ 17816764 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015725 NA non-coding NC_007113.7 CM002886.2 37301408 ~ 37307571 (+)
rainbow trout (Oncorhynchus mykiss) G753714 LOC106569597 non-coding NC_048572.1 CM023226.2 82571240 ~ 82575943 (+)