G13857


Basic Information

Item Value
gene id G13857
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 20463738 ~ 20463959 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU20449
tgcagaaagaaattaactttatttgaacaaaaaggtCTTTGTGTAATAATCCCACAAAGGGGTGAAACAGATGGCAGTCTGCTCCAGCCACGatcccagctgcagaggaggTGAAGGATGGATCATCTAACTGACACAGTTCGATGGGACAAAAGGTGAACCAGGCCCAACCGGTGGAGCAGGAAAAGGGTGGCCGGCCAAAGCGGTCGCCGCGAAGCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20449 True 222 lncRNA 0.37 1 20463738 20463959

Neighbor

gene id symbol gene type direction distance location
odf3l2a zgc:110183,LOC107749223,LOC107602632,LOC107721708,LOC107588920,LOC107690329,LOC107678684 coding upstream 28316 20433469 ~ 20435422 (+)
acvr1l acvr1l,LOC107678695,LOC107749086,LOC107602619,LOC107721710,LOC107690001 coding upstream 159964 20294585 ~ 20303774 (+)
epha4b epha4b,LOC107694655,LOC107668971,LOC108428906,LOC108268054,LOC103372263 coding upstream 717843 19644610 ~ 19745895 (+)
LOC122324221 NA coding upstream 832608 19629741 ~ 19631130 (+)
LOC122357116 NA coding upstream 838400 19622041 ~ 19625338 (+)
vcpip1 vcpip1,LOC107567007,LOC107721719,LOC107659314,LOC107690121,LOC107749097,LOC107602633 coding downstream 55950 20519909 ~ 20529006 (+)
LOC122358486 LOC107602635,LOC107566996,LOC107721759 coding downstream 73578 20537537 ~ 20539554 (+)
LOC122355453 NA coding downstream 79867 20543826 ~ 20547503 (+)
LOC122355454 cyp7b1,LOC107749124,LOC107659553,LOC107602637,LOC107566988,LOC107690180,LOC107721742 coding downstream 85984 20549943 ~ 20555995 (+)
tmeff1a LOC107749138,LOC107602613,LOC107659611 coding downstream 98955 20562914 ~ 20567961 (+)
G13821 NA non-coding upstream 142350 20317181 ~ 20321388 (+)
G13829 znf622,LOC107678698,LOC107602620,LOC107588872 non-coding upstream 148757 20312046 ~ 20314981 (+)
G13768 NA non-coding upstream 847683 19613459 ~ 19616055 (+)
G13769 NA non-coding upstream 850833 19612269 ~ 19612905 (+)
G13748 NA non-coding upstream 922760 19538570 ~ 19540978 (+)
G13874 NA non-coding downstream 1568 20465527 ~ 20465846 (+)
G13851 LOC107721736 non-coding downstream 14004 20477963 ~ 20499950 (+)
G13880 NA non-coding downstream 17058 20481017 ~ 20503339 (+)
G13883 NA non-coding downstream 22530 20486489 ~ 20486870 (+)
G13884 NA non-coding downstream 26152 20490111 ~ 20490913 (+)
crlf1a crlf1a,LOC107602622,LOC107678692,LOC107588877,LOC107690059 other upstream 34390 20416203 ~ 20429348 (+)
rem2 LOC107583115,LOC107567555,LOC107668956,LOC107738122,LOC107706340 other upstream 2301596 18138644 ~ 18162142 (+)
nedd8l nedd8l,LOC107591390,LOC104949953,LOC104931181,LOC107559219 other upstream 2592322 17870258 ~ 17871416 (+)
G13137 NA other upstream 2646974 17784179 ~ 17816764 (+)
LOC122325453 LOC107668965 other upstream 2681374 17779339 ~ 17782364 (+)
gbp2 LOC107678697,LOC107602627,LOC107690079,LOC107721763 other downstream 3309 20467268 ~ 20473524 (+)
G13882 LOC107749119,LOC107602627,LOC107721764,LOC107659530,LOC107721763 other downstream 17705 20481664 ~ 20485218 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other downstream 29215 20493174 ~ 20508391 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other downstream 699983 21163942 ~ 21164822 (+)
G14211 NA other downstream 843448 21307407 ~ 21361708 (+)

Expression


Co-expression Network