G13863


Basic Information

Item Value
gene id G13863
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 20591718 ~ 20595093 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU20455
GTAaacaatgacaacatttttattttttggatgaaccttccctttacatttattcatgttaaagATGCTTTTTTCCTTATAGGGACATATAGTTATAGTTGTCAGTTGACTGTCACTTCTCTGCAAACTGCGCATTTTTCATTAGTTACTGGACAGATCCACTGATACACTTGGTACCAATTTTTCCCACTATTGCAGAGCATAATTTTGAACAATTTCATTCTATAACACAAATATGATACATTAGAATTGATTGGAAGAAACTTTTCAAGCTAGgaaattcaaacacacacatactaatcGTAAATACGAACCTATTTATCATtcaatagttatttaaaattcatcaaCAATGAGTGATAGGCACATGATAGTTAAATGTGTGGGTTATACATGTAAGTGATAAGCTGCTCATAAAtccttttaaatgcatttatatgcatGATATGCAGTTTTTGAGCCATTTTGGTGAATGAAATGACATGTTCTTTGAAGACCAAAGGTAGAAAGGTCTCCTAAGGAATTTCAGTCTTGTGGCACCAGCGTGTCATGGGCAGATTTATAATGTTGGCGTCTTGTTCTGGGTGCAATCGTTCATGTACATTGAGAAGAGCAGTGAGGAGAAGACAACTCTGAGGTGGTGCGGCTGTTGGATGTGAATTTACCAATAATAttccaaaaaattatttaaatctataataaaacatataaatataatagttttttgctttaaaaaatgaatcataattTCCATCAGTTCAGTAATTTAATGTGGATCTGAAGCACGAAGATCTCTGCATCTGCTTGTGAACTTTAGGAGGGAGAAATTATGCACTattcaaaaatttaattttccgTATAAACAGGCTGGCAGGCTGGAAATGTGGAcaaaacccctctaaaaccagCTTAGGCTGATTTTAGCTGCTTTTTTAAgcagtgtatttaaatataaaaagtttctACAATATATAAGCATTGTAGAAATGTAATTTCCTGTAAAGCTGCGAtgatttgtattataaaaagcGCTACATAaacttgaatttaattgaagtgaatagaatagaaatgttTCAGCAGCAGGCTAAACTTCCTGCAGCAAcagttacaaaacaaaaataaatcagaaagtTTTCAACGCATTTCTTTATGAGAGATATTCTttaacattgtttgtttttaacattcacACCGTATAAAATCACTGCAACTGATTGCTGTTGTTGCTCCTGTTAATACATGTAATGGGCCTGCCTTGATTTTGACAAATTTATTCCAGGTATCCTTCAAATTAGCATGTCTGTTAACTCATGTAATGGTAGCAGGAAGAGAAAGTAGGGCTTTTTTAAATCGGTTGTAACATTTCATATATCTTTTTGTTCTGGACTTTTTAAAGTGGACTTTTTACCTCTGGACCTGTAGCTGTGAGATACCTGTATTCATCATCTCAGACACCTTTTATTGCACTTTAGGACATTATAAAGATATTAATTCAAGTAGTAGTTTGTTAGTTTTACcagtcttttgtgttttatttatcttgtttatttcttcagtcacaaaaccaaaaacagcgAATCATAATTTCCATCAGTTCAGTAATTTACTGTTGGCCCTGAAGCACGAAGATCTCTGCATCTGCTCGTGACCTTTAGGAGAAGAAATTACACagtattaaaaaatgtcattttacgTATAAACAGTTCAGAAGCACAGTGTTCGCACTTACCGCTTGTGTTTTAAGCAGCGTCATTAAGTTTACAATAACCTAAAATGAAAGATATAATGAATAAACTACAGAATTGCATACACACATCATATTTGCCGGTCTTTGTTTTGCTTAAGTTATACAAACCACTTTTCAGAGGCGCCTTTAAGAAGTCTTCCATATAAACGCACTCCATTTTTGACTTAAATTCCTGTATCACTTCGTCTGGTGTCTTTTCATCACGAGCTGCAAtagaagacagacagacagacagacagacattcgTTATGAATAAAAAGTCTGTTGTGTAACTGCATCGCATTGCAATGGTGACTTTACATGCAGAACATATACTTTGAGATCATTCTTTAAGGTTTCAGGAGATGGTTCACGCTGTactgaaagtttttttattgctgtccATTGTTGCACTGATCATGTaggtgaaaaaaatataatgagtAAAACATGATACTGACCGAACAGCGAAGCTCTGGCTTCCTCGTTTTCATCCACAAACAATACTATCATGCATGAAGGGCAGTTTATGAACTTGCCAGCACAGACAGAGTAAAGTAGCTCCTAGTATTTTTCTTACACGTATCACCAGGCGAGTTGATTCGGTCACCAACAGAGTATCGTTAGCACCTTTCTGAATGTGAAGAAGAGAGCTGTCGACGGTCTGATAGAACTTAAGATCACTTTCATCCCATGCAGTTGCTGCCACAAAATGCCAAGTGCCCATATACTGCACAGGAAGAATCTTCTCAGTAAGACCAGAGGTGGAGATAGGAGCTGGAGGAAGACATGGCACCATAACCTGCATCCCAGAATAAAACAGGCTCAATAGTGAGCTCGTAACACTCCATAATGTGCCTGAAAGCATGACTGCATCAATGGGATCGCCTGAGATTTACGACGAATGCTGATGTCTTCTAAGTCACAGATGCTGGG
>TU20456
GTAaacaatgacaacatttttattttttggatgaaccttccctttacatttattcatgttaaagATGCTTTTTTCCTTATAGGGACATATAGTTATAGTTGTCAGTTGACTGTCACTTCTCTGCAAACTGCGCATTTTTCATTAGTTACTGGACAGATCCACTGATACACTTGGTACCAATTTTTCCCACTATTGCAGAGCATAATTTTGAACAATTTCATTCTATAACACAAATATGATACATTAGAATTGATTGGAAGAAACTTTTCAAGCTAGgaaattcaaacacacacatactaatcGTAAATACGAACCTATTTATCATtcaatagttatttaaaattcatcaaCAATGAGTGATAGGCACATGATAGTTAAATGTGTGGGTTATACATGTAAGTGATAAGCTGCTCATAAAtccttttaaatgcatttatatgcatGATATGCAGTTTTTGAGCCATTTTGGTGAATGAAATGACATGTTCTTTGAAGACCAAAGGTAGAAAGGTCTCCTAAGGAATTTCAGTCTTGTGGCACCAGCGTGTCATGGGCAGATTTATAATGTTGGCGTCTTGTTCTGGGTGCAATCGTTCATGTACATTGAGAAGAGCAGTGAGGAGAAGACAACTCTGAGGTGGTGCGGCTGTTGGATGTGAATTTACCAATAATAttccaaaaaattatttaaatctataataaaacatataaatataatagttttttgctttaaaaaatgaatcataattTCCATCAGTTCAGTAATTTAATGTGGATCTGAAGCACGAAGATCTCTGCATCTGCTTGTGAACTTTAGGAGGGAGAAATTATGCACTattcaaaaatttaattttccgTATAAACAGGCTGGCAGGCTGGAAATGTGGAcaaaacccctctaaaaccagCTTAGGCTGATTTTAGCTGCTTTTTTAAgcagtgtatttaaatataaaaagtttctACAATATATAAGCATTGTAGAAATGTAATTTCCTGTAAAGCTGCGAtgatttgtattataaaaagcGCTACATAaacttgaatttaattgaagtgaatagaatagaaatgttTCAGCAGCAGGCTAAACTTCCTGCAGCAAcagttacaaaacaaaaataaatcagaaagtTTTCAACGCATTTCTTTATGAGAGATATTCTttaacattgtttgtttttaacattcacACCGTATAAAATCACTGCAACTGATTGCTGTTGTTGCTCCTGTTAATACATGTAATGGGCCTGCCTTGATTTTGACAAATTTATTCCAGGTATCCTTCAAATTAGCATGTCTGTTAACTCATGTAATGGTAGCAGGAAGAGAAAGTAGGGCTTTTTTAAATCGGTTGTAACATTTCATATATCTTTTTGTTCTGGACTTTTTAAAGTGGACTTTTTACCTCTGGACCTGTAGCTGTGAGATACCTGTATTCATCATCTCAGACACCTTTTATTGCACTTTAGGACATTATAAAGATATTAATTCAAGTAGTAGTTTGTTAGTTTTACcagtcttttgtgttttatttatcttgtttatttcttcagtcacaaaaccaaaaacagcgAATCATAATTTCCATCAGTTCAGTAATTTACTGTTGGCCCTGAAGCACGAAGATCTCTGCATCTGCTCGTGACCTTTTGTTTTAAGCAGCGTCATTAAGTTTACAATAACCTAAAATGAAAGATATAATGAATAAACTACAGAATTGCATACACACATCATATTTGCCGGTCTTTGTTTTGCTTAAGTTATACAAACCACTTTTCAGAGGCGCCTTTAAGAAGTCTTCCATATAAACGCACTCCATTTTTGACTTAAATTCCTGTATCACTTCGTCTGGTGTCTTTTCATCACGAGCTGCAAtagaagacagacagacagacagacagacattcgTTATGAATAAAAAGTCTGTTGTGTAACTGCATCGCATTGCAATGGTGACTTTACATGCAGAACATATACTTTGAGATCATTCTTTAAGGTTTCAGGAGATGGTTCACGCTGTactgaaagtttttttattgctgtccATTGTTGCACTGATCATGTaggtgaaaaaaatataatgagtAAAACATGATACTGACCGAACAGCGAAGCTCTGGCTTCCTCGTTTTCATCCACAAACAATACTATCATGCATGAAGGGCAGTTTATGAACTTGCCATCCCAGATCAGTGCCATAGCGTCGTAATCTGTTCACACagtcatataaaaaaatgaaattaaatcacaACAAATCTTATGTCTTTTgacataataacaaaaaagatgGGTTTTAGTGTAAAACATGGATAGACAGTCTCGAATTACCATGCTTCAGACTGTATATAAATTCCTACCAGTTCTGAACAGGAATGGGTCCAGCACAGACAGAGTAAAGTAGCTCCTAGTATTTTTCTTACACGTATCACCAGGCGAGTTGATTCGGTCACCAACAGAGTATCGTTAGCACCTTTCTGAATGTGAAGAAGAGAGCTGTCGACGGTCTGATAGAACTTAAGATCACTTTCATCCCATGCAGTTGCTGCCACAAAATGCCAAAGGTGGAGATAGGAGCTGGAGGAAGACATGGCACCATAACCTGCATCCCAGAATAAAACAGGCTCAATAGTGAGCTCGTAACACTCCATAATGTGCCTGAAAGCATGACTGCATCAATGGGATCGCCTGAGATTTACGACGAATGCTGATGTCTTCTAAGTCACAGATGCTGGG

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0061008 hepaticobiliary system development biological_process
GO:0006508 proteolysis biological_process
GO:0001889 liver development biological_process
GO:0005579 membrane attack complex cellular_component
GO:0046930 pore complex cellular_component
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU20455 False 2665 lncRNA 0.36 4 20591718 20595093
TU20456 True 2739 lncRNA 0.32 4 20591718 20595093

Neighbor

gene id symbol gene type direction distance location
tmem71 tmem71,si:ch211-235o23.1,LOC107690185,LOC107749144,LOC107659711,LOC107566994 coding upstream 3143 20578426 ~ 20588575 (+)
ift57 ift57,LOC107659588,LOC107602615,LOC107566989,LOC107690362 coding upstream 14069 20572747 ~ 20577649 (+)
cavin4a murca,LOC107749140,LOC107602614,LOC107659646,LOC107690354,LOC107721748,LOC108428327 coding upstream 19797 20568457 ~ 20571921 (+)
tmeff1a LOC107749138,LOC107602613,LOC107659611 coding upstream 23757 20562914 ~ 20567961 (+)
LOC122355454 cyp7b1,LOC107749124,LOC107659553,LOC107602637,LOC107566988,LOC107690180,LOC107721742 coding upstream 35723 20549943 ~ 20555995 (+)
LOC122360253 NA coding downstream 1239 20596332 ~ 20605933 (+)
march11 march11,LOC107659635,LOC107602618,LOC107749139,LOC107663337,LOC107721766 coding downstream 111871 20706964 ~ 20712152 (+)
LOC122357870 NA coding downstream 155743 20750836 ~ 20753976 (+)
LOC122357878 NA coding downstream 168438 20763531 ~ 20768201 (+)
LOC122357891 LOC107749191,LOC107749120 coding downstream 173951 20769044 ~ 20771030 (+)
G13896 NA non-coding upstream 58980 20532212 ~ 20532738 (+)
G13880 NA non-coding upstream 88379 20481017 ~ 20503339 (+)
G13851 LOC107721736 non-coding upstream 91768 20477963 ~ 20499950 (+)
G13884 NA non-coding upstream 100805 20490111 ~ 20490913 (+)
G13883 NA non-coding upstream 104848 20486489 ~ 20486870 (+)
G13909 gtpbp4,LOC107690210,LOC107721733,LOC107567003 non-coding downstream 21065 20616158 ~ 20617660 (+)
G13964 NA non-coding downstream 304471 20899564 ~ 20946266 (+)
G13980 NA non-coding downstream 360842 20955935 ~ 20957136 (+)
G13976 NA non-coding downstream 366600 20961693 ~ 20966228 (+)
G13992 NA non-coding downstream 553087 21148180 ~ 21148512 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other upstream 83327 20493174 ~ 20508391 (+)
G13882 LOC107749119,LOC107602627,LOC107721764,LOC107659530,LOC107721763 other upstream 106500 20481664 ~ 20485218 (+)
gbp2 LOC107678697,LOC107602627,LOC107690079,LOC107721763 other upstream 118194 20467268 ~ 20473524 (+)
crlf1a crlf1a,LOC107602622,LOC107678692,LOC107588877,LOC107690059 other upstream 162370 20416203 ~ 20429348 (+)
rem2 LOC107583115,LOC107567555,LOC107668956,LOC107738122,LOC107706340 other upstream 2429576 18138644 ~ 18162142 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other downstream 568849 21163942 ~ 21164822 (+)
G14211 NA other downstream 712314 21307407 ~ 21361708 (+)
LOC122354659 LOC107749134,LOC107659944,LOC107600069,LOC107692888,LOC107557869,LOC107721709,LOC101885494 other downstream 886041 21481134 ~ 21482642 (+)
ece2a ece2a,LOC107660439,LOC107600061,LOC107557862 other downstream 938152 21533245 ~ 21621097 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other downstream 1119590 21714683 ~ 21716290 (+)

Expression


Co-expression Network