G14542


Basic Information

Item Value
gene id G14542
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22577023 ~ 22578223 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU21475
GTGTATTAGATGCTGATGATGAATATTAGATAAAAAccgagaataaaaaaatgattataataataaatgactaaaattttaaaatgatgcaaaatCAAAGCAAACCCTAACAGGTCACAGAAGAAGAGTGAAAGTCTAGAGTTGTTTTCTTCAGACGTTGGGACGCACCTTGAGCTGGCGGTTCTCGTCGCTGAGCTTGCTGACCTCGGTCTGCAAACGTCTGCACTCCTCCAGGATCTTCATCTTCTCCGAGTCGTCCACGGCCTTCGCCGGCCCCGGCCCGTCCGCTTTAGACGAGTTCAGAACCAGCGCCGCCTTAGAGTCCAGCTCGCTCCTTTATCGTTTTCAGACGGCAGCTCGAAGACGCATCTGAGTTTGGAATCCATGAGCTCATCGGGCTTCACGTCTTTCCACTGAAACACATGAAAAACAGGCAGTTCATCAGCCACAAGCACTACCAGCtgcccccacacacacacacactccctaacatgcatgctctctctctttcacacacacactctttctctgacacacacacacacacacacacacacagactctcccTAACATGCATActcgctcactctctctcacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21475 True 604 lncRNA 0.40 2 22577023 22578223

Neighbor

gene id symbol gene type direction distance location
LOC122357060 NA coding upstream 5023 22562512 ~ 22572000 (+)
epb41l3b epb41l3b,epb41l3,LOC107689342,LOC107729731,LOC107750217,LOC108427206 coding upstream 27156 22515405 ~ 22549867 (+)
LOC122324242 ephb1,LOC107549839,LOC107671589,LOC108430182,LOC106599529,LOC103359190 coding upstream 250851 22134354 ~ 22326172 (+)
gpc1b gpc1b,LOC107660106,LOC107749182,LOC107730456,LOC107549820,LOC107600088,LOC107671591 coding upstream 471922 22044868 ~ 22105101 (+)
gpc5c gpc5c,LOC107749179,LOC107660087,LOC107671592,LOC107730460 coding upstream 550936 21929297 ~ 22026087 (+)
LOC122323627 NA coding downstream 14376 22592599 ~ 22601454 (+)
foxl2b LOC107574316,LOC107730743,LOC107683772,LOC107750224,LOC107549802,LOC107684570 coding downstream 60663 22638886 ~ 22640594 (+)
pnp5b pnp5b,LOC107730396,LOC107574318,LOC107750205,LOC107549813,LOC107684565 coding downstream 80841 22659064 ~ 22665912 (+)
ncstn ncstn,LOC107552665,LOC107671788,LOC107696591,LOC107726318 coding downstream 93878 22672101 ~ 22688316 (+)
nectin4b LOC107726329,LOC107696495,LOC107671794 coding downstream 117858 22696081 ~ 22717815 (+)
G14540 NA non-coding upstream 63086 22512171 ~ 22513937 (+)
G14535 NA non-coding upstream 100821 22475781 ~ 22476202 (+)
G14532 NA non-coding upstream 104420 22467860 ~ 22472603 (+)
G14484 LOC107568745 non-coding upstream 661995 21913520 ~ 21915028 (+)
G14477 NA non-coding upstream 681545 21895171 ~ 21895478 (+)
G14549 NA non-coding downstream 65572 22643795 ~ 22650843 (+)
G14578 NA non-coding downstream 164204 22742427 ~ 22786013 (+)
G14553 NA non-coding downstream 198017 22776240 ~ 22777003 (+)
LOC122357472 NA non-coding downstream 208498 22786721 ~ 22802473 (+)
LOC122328317 NA non-coding downstream 235043 22813266 ~ 22829545 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 91368 22461916 ~ 22485655 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other upstream 709624 21857212 ~ 21867399 (+)
G14471 NA other upstream 715581 21860891 ~ 21861442 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other upstream 724016 21843575 ~ 21853007 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other upstream 860733 21714683 ~ 21716290 (+)
LOC122327931 NA other downstream 55306 22633529 ~ 22674275 (+)
fcer1gl LOC107671799 other downstream 112976 22691199 ~ 22695330 (+)
LOC122324535 NA other downstream 424942 23003165 ~ 23005254 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 966883 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 1357698 23935921 ~ 23939016 (+)

Expression


Co-expression Network