LOC122327931


Basic Information

Item Value
gene id LOC122327931
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22633529 ~ 22674275 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU21518
tgtttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgcacctgtctgtctgagtgtttgtttgtgtgtgtgtgtgcatgagtgtgtgtgtgtgtgcgtgcacctgtctgtctgagtgtttgtgtgtggtgtgtttgtgtgtgcacgagtgtgagtgtgtgtgtgtgaatctgtctgtctgtgtgtgtgtttgcgcctgtctgagtgtgtgtgtgtgtgtgtttgtttgtggctgtctgagtgtgtgtgtgtgtgtgtttgtttgtggctgtctgagtgtgtgtgtgtgtgtgtctcttatGTGTCCTGGGAATAGCCAACAACGTCAAGCTTTAAAAACAAGACACAAAAGTATCACATAATGGTCCTGACGTTATGATATATTCATAAGagctttatacacacacacacacacacacacacacacacattctcttcCGTTAGCATACACAGAACATGTTCTCAtcaatttttgcttttataatttCAGACTGAATTTAGGATCAAATCCGTgagttttataaatgaggccccattttattttatttttgttgttgttttttttgtcattgatgcgttaattattatttttattatttatgttttacattttttaatcaggTTTAAGGGGTGTTTTACTGATGTTTCTGTTACGTTacgaaaatatttaataactggTGTTTATGTGAAAGTGAAGGGAAAACTCCAGTGTGTCATTTCCTAACGTTCTAAGAAgcacaaacattaaaaagacGTTCTAATAATGTTCTCTGGCGGGACGACGATAGGCATGATTGGATGAATGTATTCTTTCCTGAAAATGTTTGCCTGATTTTCTGATATATTCTTGTTTCTAACTGTTTGATCcacatctatctatcagtgTAGTCTTCATCATAGTCGTGTGTTCCCTGTAGTCTTCATCTACTTTAAAGAATAAACAGTATGTC
>TU21520
gagagagagtgtgtgtgtgtgtgtgtgtgagagtgtgtgagagtgtgtgtgtgtgtgtgtgtgagagagtgtgagagagagtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtttgtttgtggcggtctgagtgtgtgtgtgtgtgtgtttgtttgtgcctgtctgagtgtgtgtttgtgtgtgtgtgtgtttgtttgtggcggtctgagtgtgtgtgtgtgtgtgtttgtttgtgcctgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcttatGTGTCCTGGGAATAGCCAACAACGTCAAGCTTTAAAAACAAGACACAAAAGTATCACATAATGGTCCTGACGTTATGATATATTCATAAGagctttatacacacacacacacacacacacacacacacattctcttcCGTTAGCATACACAGAACATGTTCTCAtcaatttttgcttttataatttCAGACTGAATTTAGGATCAAATCCGTgagttttataaatgaggccccattttattttatttttgttgttgttttttttgtcattgatgcgttaattattatttttattatttatgttttacattttttaatcaggTTTAAGGGGTGTTTTACTGATGTTTCTGTTACGTTacgaaaatatttaataactggTGTTTATGTGAAAGTGAAGGGAAAACTCCAGTGTGTCATTTCCTAACGTTCTAAGAAgcacaaacattaaaaagacGTTCTAATAATGTTCTCTGGCGGGACGACGATAGGCATGATTGGATGAATGTATTCTTTCCTGAAAATGTTTGCCTGATTTTCTGATATATTCTTGTTTCTAACTGTTTGATCcacatctatctatcagtgTAGTCTTCATCATAGTCGTGTGTTCCCTGTAGTCTTCATCTACTTTAAAGAATAAACAGTATGTC
>XM_043223624.1
TTAATCTGTTGCATCGTCACTGAGGTCGTGTCCAGTTTCGTTTCTGCTGAAGTCCTGCCTCTTACAGTAAAAGGGTCCCACATCATTACAAACTCACAGAGAGACCAGAGAAACGAAACGAAACTGCACGACATGTCCGAGCAAGGAGCGAGTCGTTACGGGCAGCGGCCCGGCTCAAACGAGGGAAACGGAGATGTTTGCTCTCCCTCTCAAACTCAAGGTTCAGCTGGCGGCGATCCGCTCGGAGAAAACCAGCTGAGGCTGGTCCTGCTGGGAAAAACCGGTGCGGGGAAAAGTGCGACGGGAAACAGCATCCTGGGAAACAGATGCTTTGATGAAGATCTGAGCATGGGTTCGGTCACTAAAGAGAGTAAGAAAGCGTGTGCTGCGGTGGAAGGACGAGAGCTTCTTCTCATTGACACGCCTGGGTTTTTTGACACCgatttaaaagaagaagaattacAAAAAGAAGCAGTTCATTGCCTGACCTTGTGTGCTCCCGGTCCTCATGTGTTTCTGATCGTTATACCGATAGAACGATATACAGAGGAGCAGCAACGCACCGTACACATGATTCTGGAGATGTTCAGTGGAGACATCAGCGATCACAGCATCCTGGTCTTCTCCCACGCCGACAGACTTAACGGAGAACCCATCGAAAGGTTCGTGTCCAGACAAAATGCTAAAGTTCAAGAGCTCGTGGAGAGATTCGGGAGGCGTTTCGTGGCCTTTGACAACACAAACCCTGCAAACCGAGTACAAGTGAGACGGCTCCTGCAGAAAGCGACGCAGCTGCTGGTCAGGAATAATTACGGTCACTTCGTTAATGAAGTTACTGAGGCGGTGCAGGCCGCAAAGAGCATCATGGAAGAAAAAGCGGCCGAGAGAGCGAGGAAAATAAAGGAGGAGGTCAAGAATGCGGCCGATGTCCGTCGGCGTGCGCTTATCTCTTACATGAACGAAGAGAGGCGAGAAGCTGATCAGAGAAGGAAGCGCGTTCAGCGCAGGATCGATCAGATTCAGACGGATGTGATGAAGGAGGAGCAGAACGTGCGGCCGATTCCGGAAAGACTGAGACGCTTCGCTGCGTCTCTGAGGGCCGAGCTGGAGAACATGCGTCGACTGGAGCAGAGATGcatggaggaggagagagagagaaaggaaagagaagagagagaataCACCGACCTGGACGTCTGGATGCAAGAAGAGGAGCAGAGGAAACTGAGCGAAGCAGGACAGGCCAGTCCTCTTTCTCCTGATGATCATAAAAGGCTGATTATGCTGACCATGTTTCTGCTGGGGATCGGGGCTTCGTTCGCGCCCGCTCTCTTACCGCTGCTGTTCCCCGCAGCTCCAGCGGTGGAAACCGGGCTGGCGGCGGGGCTTTTGTCCAAACTGTTGGCTGCGGAAGGGTGGGGTTTGGTTTGGGTGCTGGCTGGAGTGGCCAAAGCTGCGGTCCTGACCCGCTGCTCCATCCAGTGACGTGGACGACCCAGCGGAGACGTTTGAGCGGTCGTCACGAGATACAGAAGAGGTTTATGAATCAGACAGAAGTAGTTCTGATGAAGTTTCAGTGACGAGGAGGTTTAGGGTCAGAGAGaaaatacgtgtgtgtgtgtgtgtgtgtgtgtgcacctgtctgtctgagtgtttgtttgtgtgtgtgtgtgcatgagtgtgtgtgtgtgtgcgtgcacctgtc
>XM_043223631.1
TTAATCTGTTGCATCGTCACTGAGGTCGTGTCCAGTTTCGTTTCTGCTGAAGTCCTGCCTCTTACAGTAAAAGGGTCCCACATCATTACAAACTCACAGAGAGACCAGAGAAACGAAACGAAACTGCACGACATGTCCGAGCAAGGAGCGAGTCGTTACGGGCAGCGGCCCGGCTCAAACGAGGGAAACGGAGATGTTTGCTCTCCCTCTCAAACTCAAGGTTCAGCTGGCGGCGATCCGCTCGGAGAAAACCAGCTGAGGCTGGTCCTGCTGGGAAAAACCGGTGCGGGGAAAAGTGCGACGGGAAACAGCATCCTGGGAAACAGATGCTTTGATGAAGATCTGAGCATGGGTTCGGTCACTAAAGAGAGTAAGAAAGCGTGTGCTGCGGTGGAAGGACGAGAGCTTCTTCTCATTGACACGCCTGGGTTTTTTGACACCgatttaaaagaagaagaattacAAAAAGAAGCAGTTCATTGCCTGACCTTGTGTGCTCCCGGTCCTCATGTGTTTCTGATCGTTATACCGATAGAACGATATACAGAGGAGCAGCAACGCACCGTACACATGATTCTGGAGATGTTCAGTGGAGACATCAGCGATCACAGCATCCTGGTCTTCTCCCACGCCGACAGACTTAACGGAGAACCCATCGAAAGGTTCGTGTCCAGACAAAATGCTAAAGTTCAAGAGCTCGTGGAGAGATTCGGGAGGCGTTTCGTGGCCTTTGACAACACAAACCCTGCAAACCGAGTACAAGTGAGACGGCTCCTGCAGAAAGCGACGCAGCTGCTGGTCAGGAATAATTACGGTCACTTCGTTAATGAAGTTACTGAGGCGGTGCAGGCCGCAAAGAGCATCATGGAAGAAAAAGCGGCCGAGAGAGCGAGGAAAATAAAGGAGGAGGTCAAGAATGCGGCCGATGTCCGTCGGCGTGCGCTTATCTCTTACATGAACGAAGAGAGGCGAGAAGCTGATCAGAGAAGGAAGCGCGTTCAGCGCAGGATCGATCAGATTCAGACGGATGTGATGAAGGAGGAGCAGAACGTGCGGCCGATTCCGGAAAGACTGAGACGCTTCGCTGCGTCTCTGAGGGCCGAGCTGGAGAACATGCGTCGACTGGAGCAGAGATGcatggaggaggagagagagagaaaggaaagagaagagagagaataCACCGACCTGGACGTCTGGATGCAAGAAGAGGAGCAGAGGAAACTGAGCGAAGCAGGACAGGCCAGTCCTCTTTCTCCTGATGATCATAAAAGGCTGATTATGCTGACCATGTTTCTGCTGGGGATCGGGGCTTCGTTCGCGCCCGCTCTCTTACCGCTGCTGTTCCCCGCAGCTCCAGCGGTGGAAACCGGGCTGGCGGCGGGGCTTTTGTCCAAACTGTTGGCTGCGGAAGGGTGGGGTTTGGTTTGGGTGCTGGCTGGAGTGGCCAAAGCTGCGGTCCTGACCCGCTGCTCCATCCAGTGACGTGGACGACCCAGCGGAGACGTTTGAGCGGTCGTCACGAGATACAGAAGAGGTTTATGAATCAGACAGAAGTAGTTCTGATGAAGTTTCAGTGACGAGGAGGTTTAGGGTCAGAGAGaaaatacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgcctgtctgagtgtgtgt
>XM_043223641.1
TTAATCTGTTGCATCGTCACTGAGGTCGTGTCCAGTTTCGTTTCTGCTGAAGTCCTGCCTCTTACAGTAAAAGGGTCCCACATCATTACAAACTCACAGAGAGACCAGAGAAACGAAACGAAACTGCACGACATGTCCGAGCAAGGAGCGAGTCGTTACGGGCAGCGGCCCGGCTCAAACGAGGGAAACGGAGATGTTTGCTCTCCCTCTCAAACTCAAGGTTCAGCTGGCGGCGATCCGCTCGGAGAAAACCAGCTGAGGCTGGTCCTGCTGGGAAAAACCGGTGCGGGGAAAAGTGCGACGGGAAACAGCATCCTGGGAAACAGATGCTTTGATGAAGATCTGAGCATGGGTTCGGTCACTAAAGAGAGTAAGAAAGCGTGTGCTGCGGTGGAAGGACGAGAGCTTCTTCTCATTGACACGCCTGGGTTTTTTGACACCgatttaaaagaagaagaattacAAAAAGAAGCAGTTCATTGCCTGACCTTGTGTGCTCCCGGTCCTCATGTGTTTCTGATCGTTATACCGATAGAACGATATACAGAGGAGCAGCAACGCACCGTACACATGATTCTGGAGATGTTCAGTGGAGACATCAGCGATCACAGCATCCTGGTCTTCTCCCACGCCGACAGACTTAACGGAGAACCCATCGAAAGGTTCGTGTCCAGACAAAATGCTAAAGTTCAAGAGCTCGTGGAGAGATTCGGGAGGCGTTTCGTGGCCTTTGACAACACAAACCCTGCAAACCGAGTACAAGTGAGACGGCTCCTGCAGAAAGCGACGCAGCTGCTGGTCAGGAATAATTACGGTCACTTCGTTAATGAAGTTACTGAGGCGGTGCAGGCCGCAAAGAGCATCATGGAAGAAAAAGCGGCCGAGAGAGCGAGGAAAATAAAGGAGGAGGTCAAGAATGCGGCCGATGTCCGTCGGCGTGCGCTTATCTCTTACATGAACGAAGAGAGGCGAGAAGCTGATCAGAGAAGGAAGCGCGTTCAGCGCAGGATCGATCAGATTCAGACGGATGTGATGAAGGAGGAGCAGAACGTGCGGCCGATTCCGGAAAGACTGAGACGCTTCGCTGCGTCTCTGAGGGCCGAGCTGGAGAACATGCGTCGACTGGAGCAGAGATGcatggaggaggagagagagagaaaggaaagagaagagagagaataCACCGACCTGGACGTCTGGATGCAAGAAGAGGAGCAGAGGAAACTGAGCGAAGCAGGACAGGCCAGTCCTCTTTCTCCTGATGATCATAAAAGGCTGATTATGCTGACCATGTTTCTGCTGGGGATCGGGGCTTCGTTCGCGCCCGCTCTCTTACCGCTGCTGTTCCCCGCAGCTCCAGCGGTGGAAACCGGGCTGGCGGCGGGGCTTTTGTCCAAACTGTTGGCTGCGGAAGGGTGGGGTTTGGTTTGGGTGCTGGCTGGAGTGGCCAAAGCTGCGGTCCTGACCCGCTGCTCCATCCAGTGACGTGGACGACCCAGCGGAGACGTTTGAGCGGTCGTCACGAGATACAGAAGAGGTTTATGAATCAGACAGAAGTAGTTCTGATGAAGTTTCAGTGACGAGGAGGTTTAGGGTCAGAGAGaaaatacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgcctgtctgagtgtg

Function

GO:

id name namespace
GO:0002253 activation of immune response biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05144 Malaria

RNA

RNA id representative length rna type GC content exon number start site end site
TU21518 False 974 lncRNA 0.38 3 22643403 22670794
TU21520 False 940 lncRNA 0.31 4 22633529 22670794
XM_043223624.1 True 1705 mRNA 0.53 2 22667312 22669516
XM_043223631.1 False 1668 mRNA 0.53 3 22667312 22674275
XM_043223641.1 False 1665 mRNA 0.53 3 22667312 22674272

Neighbor

gene id symbol gene type direction distance location
LOC122323627 NA coding upstream 32075 22592599 ~ 22601454 (+)
LOC122357060 NA coding upstream 61529 22562512 ~ 22572000 (+)
epb41l3b epb41l3b,epb41l3,LOC107689342,LOC107729731,LOC107750217,LOC108427206 coding upstream 83662 22515405 ~ 22549867 (+)
LOC122324242 ephb1,LOC107549839,LOC107671589,LOC108430182,LOC106599529,LOC103359190 coding upstream 307357 22134354 ~ 22326172 (+)
gpc1b gpc1b,LOC107660106,LOC107749182,LOC107730456,LOC107549820,LOC107600088,LOC107671591 coding upstream 528428 22044868 ~ 22105101 (+)
nectin4b LOC107726329,LOC107696495,LOC107671794 coding downstream 21806 22696081 ~ 22717815 (+)
si:dkeyp-68b7.12 LOC107696752,LOC107552668 coding downstream 56399 22730674 ~ 22751530 (+)
si:dkeyp-68b7.5 LOC107726324,LOC107671818,LOC107696531,LOC107552690,LOC107549807,LOC107750223 coding downstream 78478 22752753 ~ 22757673 (+)
tpgs1 tpgs1 coding downstream 96274 22770549 ~ 22773756 (+)
sf3a2 sf3a2,LOC107726326,LOC107696543,LOC107671791,LOC107750226 coding downstream 106548 22780823 ~ 22784846 (+)
G14541 NA non-coding upstream 47279 22522411 ~ 22586250 (+)
G14542 NA non-coding upstream 55306 22577023 ~ 22578223 (+)
G14540 NA non-coding upstream 119592 22512171 ~ 22513937 (+)
G14535 NA non-coding upstream 157327 22475781 ~ 22476202 (+)
G14532 NA non-coding upstream 160926 22467860 ~ 22472603 (+)
G14578 NA non-coding downstream 68152 22742427 ~ 22786013 (+)
G14553 NA non-coding downstream 101965 22776240 ~ 22777003 (+)
LOC122357472 NA non-coding downstream 112446 22786721 ~ 22802473 (+)
LOC122328317 NA non-coding downstream 138991 22813266 ~ 22829545 (+)
G14589 NA non-coding downstream 173638 22847913 ~ 22879465 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 147874 22461916 ~ 22485655 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other upstream 766130 21857212 ~ 21867399 (+)
G14471 NA other upstream 772087 21860891 ~ 21861442 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other upstream 780522 21843575 ~ 21853007 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other upstream 917239 21714683 ~ 21716290 (+)
fcer1gl LOC107671799 other downstream 16924 22691199 ~ 22695330 (+)
LOC122324535 NA other downstream 328890 23003165 ~ 23005254 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 870831 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 1261646 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 1371410 24045685 ~ 24048465 (+)

Expression


Co-expression Network