fcer1gl (LOC107671799)


Basic Information

Item Value
gene id fcer1gl
gene name LOC107671799
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22691199 ~ 22695330 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU21525
GCCATGGTTTACTCTTCCTCTTCACTTCTCTGCTCAACTCATTTCAGAGGAAAGATGCAGTCGCTGGACGTCTGTCTGATTCTCCTGCTCAACGCCGGACGAGTCGCTGCGCAGCAGGGTGGAGACGTGTGTTACGTTCTGGACGGGATTCTGATTGTTTACGGCATTGTGTTGACCGTCCTTTACTGCAGATTAAAGATGCGTTCTTCTGGAGCGAAAGAGAAGCAGGACGGAGAGATTTATCAGGATCTGGGACGGCGGGACGCAGACACCTACGACACCATCGACACCCACCATCTTGGGAAGAAGAAGCCGCTGGCCTAAAAGAGACCCCCGAACCGCAGATCATTGGGCGTTCATGCCCTAAAAACTGTATTCGTGAGCCTGGAGCATGAAAGCAGTCATAAGCAGCTTGGGTATATCTGTAGTCATTCACAAAAACACGCTATATGGctcaaaatgatctttttttgcaccctcagattcaagattttcaaatagtcgTCTCTCAGCTGAATACATCAAtgtaaagattatttattcagattttaaatgatgtatGAATCTCAGTTTTGGTTTAAAATTGGACCCTTATCACTGGTCTTGTGCTCCATGGCCACGTTTTTGCGTTGTTTATAAGAAAGCGAACCGGCTTGGTTGAGTATGAGAGTCTGCTTTATTGTTGTTGTCTGCATGCGTCTTTGAGACGAGCGTCActtttaatgtgtaaaatacatgtataaGGCGATTtatttcaacataataaaataatatttttaacttgGACTTAGATTAATAGTGTGTTTGTATGTTAGCATAGCGCGGCTATTTGTGAATGCGCGCGGCTTCCGGTGTCGACCACTTCCGGTTCTTCTTAGCGGTACAAAAACAGCTCGTTAC
>XM_043259985.1
tttcggaCAGTTTGTCTCAGCCCACAGTTTCCTGTTAAATGACTCTGTCACTGCCATGGTTTACTCTTCCTCTTCACTTCTCTGCTCAACTCATTTCAGAGGAAAGATGCAGTCGCTGGACGTCTGTCTGATTCTCCTGCTCAACGCCGGACGAGTCGCTGCGCAGCAGGGTGGAGACGTGTGTTACGTTCTGGACGGGATTCTGATTGTTTACGGCATTGTGTTGACCGTCCTTTACTGCAGATTAAAGATGCGTTCTTCTGGAGCGAAAGAGAAGCAGGACGGAGAGATTTATCAGGATCTGGGACGGCGGGACGCAGACACCTACGACACCATCGACACCCACCATCTTGGGAAGAAGAAGCCGCTGGCCTAAAAGAGACCCCCGAACCGCAGATCATTGGGCGTTCATGCCCTAAAAACTGTATTCGTGAGCCTGGAGCATGAAAGCAGTCATAAGCAGCTTGGGTATATCTGTAGTCATTCACAAAAACACGCTATATGGctcaaaatgatctttttttgcaccctcagattcaagattttcaaatagtcgTCTCTCAGCTGAATACATCAAtgtaaagattatttattcagattttaaatgatgtatGAATCTCAGTTTTGGTTTAAAATTGGACCCTTATCACTGGTCTTGTGCTCCATGGCCACGTTTTTGCGTTGTTTATAAGAAAGCGAACCGGCTTGGTTGAGTATGAGAGTCTGCTTTATTGTTGTTGTCTGCATGCGTCTTTGAGACGAGCGTCActtttaatgtgtaaaatacatgtataaGGCGATTtatttcaacataataaaataatatttttaacttgGA

Function

NR:

description
PREDICTED: high affinity immunoglobulin epsilon receptor subunit gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21525 True 900 TUCP 0.44 5 22691251 22695330
XM_043259985.1 False 838 mRNA 0.44 5 22691199 22695216

Neighbor

gene id symbol gene type direction distance location
ncstn ncstn,LOC107552665,LOC107671788,LOC107696591,LOC107726318 coding upstream 2883 22672101 ~ 22688316 (+)
pnp5b pnp5b,LOC107730396,LOC107574318,LOC107750205,LOC107549813,LOC107684565 coding upstream 25287 22659064 ~ 22665912 (+)
foxl2b LOC107574316,LOC107730743,LOC107683772,LOC107750224,LOC107549802,LOC107684570 coding upstream 50605 22638886 ~ 22640594 (+)
LOC122323627 NA coding upstream 89745 22592599 ~ 22601454 (+)
LOC122357060 NA coding upstream 119199 22562512 ~ 22572000 (+)
nectin4b LOC107726329,LOC107696495,LOC107671794 coding downstream 751 22696081 ~ 22717815 (+)
si:dkeyp-68b7.12 LOC107696752,LOC107552668 coding downstream 35344 22730674 ~ 22751530 (+)
si:dkeyp-68b7.5 LOC107726324,LOC107671818,LOC107696531,LOC107552690,LOC107549807,LOC107750223 coding downstream 57423 22752753 ~ 22757673 (+)
tpgs1 tpgs1 coding downstream 75219 22770549 ~ 22773756 (+)
sf3a2 sf3a2,LOC107726326,LOC107696543,LOC107671791,LOC107750226 coding downstream 85493 22780823 ~ 22784846 (+)
G14549 NA non-coding upstream 40356 22643795 ~ 22650843 (+)
G14541 NA non-coding upstream 104949 22522411 ~ 22586250 (+)
G14542 NA non-coding upstream 112976 22577023 ~ 22578223 (+)
G14540 NA non-coding upstream 177262 22512171 ~ 22513937 (+)
G14535 NA non-coding upstream 214997 22475781 ~ 22476202 (+)
G14578 NA non-coding downstream 47097 22742427 ~ 22786013 (+)
G14553 NA non-coding downstream 80910 22776240 ~ 22777003 (+)
LOC122357472 NA non-coding downstream 91391 22786721 ~ 22802473 (+)
LOC122328317 NA non-coding downstream 117936 22813266 ~ 22829545 (+)
G14589 NA non-coding downstream 152583 22847913 ~ 22879465 (+)
LOC122327931 NA other upstream 16924 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 205544 22461916 ~ 22485655 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other upstream 823800 21857212 ~ 21867399 (+)
G14471 NA other upstream 829757 21860891 ~ 21861442 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other upstream 838192 21843575 ~ 21853007 (+)
LOC122324535 NA other downstream 307835 23003165 ~ 23005254 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 849776 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 1240591 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 1350355 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 1364082 24059412 ~ 24062202 (+)

Expression


Co-expression Network