G14872


Basic Information

Item Value
gene id G14872
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23744871 ~ 23746553 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22056
ATTtccatatattataatacagatGCAGAATTGAAAGTTTATTCTTTAAACAGCCTAAtattttacaaagaaatggATAACTGTCTGGAACTTTCAAACATGTCCTTAAAACAGGACACTGTTGATTACATTTCATCAAGTCCAACGTTGTTATCGACGTCCGTCAACATAGGGGCAGCAAAGCGGGAGAGAAGGGAAGGAAatggaaaaaactaaaagaatgaGGGGAGGAacgaataaattaaaaaaggtaGTTGTAATGGGgataatacataatttttttcctctgcaCTCCTTTTATTCACACTTAAAGACACACCGGTCGGGAGAGGAGCATGATCCAGCTCGGTGGAGGGACACTGTGAAATTGGTTGACGACTCTCCTGCAGAAGCAAGCCTCTCTCTTGCTTTTCTCAGGGTGCTGTGTTTTTGGTTCTTTTCGTGGCTGTGGGGCAGCGCTTTTATTGCAACTGTGGTTTCCTCCGAAttagggaggaaaaaaaaattgctgccCTGAATCTAATCCAAATCAAAAAACGGATTTAAAaacggatttaaaaaaaaaaaaaagaagagaggaaaGGGATTGAGGAGAATATAAGGGATGCTGTTCAGAACGGAAACTGTCAGTAGGGGAAGCTTGTTGATCAGCAGGCCTCAAAAGTCTTCCACAGTCTCAATCTCGCCCATGTTGAGTCTCTCAGATGAGGCATTGACAGAAAAACTAGAAGGCTCGGGTCGGCTCGTAccatcttctgtttcttcttcttcttgccCGAGGTGACCGTCTCAaaccgctgctgctgctgctgttggtgCAGGACTGAGTGTGACACTTGGCTCATTCCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22056 True 852 lncRNA 0.45 2 23744871 23746553

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_1 NA coding upstream 7749 23737051 ~ 23737122 (+)
pitrm1 pitrm1,LOC107698483,LOC107679400,LOC107724807 coding upstream 29634 23703501 ~ 23715237 (+)
klf6b klf6,LOC107698482,LOC107679408,LOC107572997,LOC107724813,LOC107569266,LOC107728392 coding upstream 42607 23698257 ~ 23702264 (+)
LOC122354999 NA coding upstream 107441 23634222 ~ 23637430 (+)
LOC122354760 NA coding upstream 114498 23625007 ~ 23630373 (+)
LOC122356725 LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909 coding downstream 19405 23765958 ~ 23770492 (+)
lpar5a LOC107737401,LOC107698486,LOC107572991,LOC107679392,LOC107728381,LOC107569267 coding downstream 26327 23772880 ~ 23775183 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding downstream 37171 23783724 ~ 23786255 (+)
LOC122323665 NA coding downstream 173678 23920231 ~ 23925631 (+)
LOC122323657 NA coding downstream 183078 23929631 ~ 23931889 (+)
G14860 NA non-coding upstream 22124 23722266 ~ 23722747 (+)
G14841 NA non-coding upstream 53011 23690422 ~ 23691860 (+)
G14850 LOC107724821,LOC107698475,LOC107573003,LOC107709797,LOC107680183,LOC107577770 non-coding upstream 61473 23668563 ~ 23683398 (+)
LOC122355031 NA non-coding upstream 101321 23642463 ~ 23643550 (+)
G14837 cul3a,LOC107679386,LOC102194569,LOC105907048,LOC107567698,LOC107724810 non-coding upstream 182519 23558249 ~ 23562352 (+)
G14889 NA non-coding downstream 30550 23777103 ~ 23780120 (+)
G14863 LOC107728390,LOC107572994,LOC107737392,LOC107569272 non-coding downstream 44709 23791262 ~ 23795903 (+)
G14896 per2,LOC107572994,LOC107698490 non-coding downstream 57231 23803784 ~ 23804629 (+)
G14978 NA non-coding downstream 132625 23879178 ~ 23879604 (+)
G14979 NA non-coding downstream 137209 23883762 ~ 23884416 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 196897 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 739617 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 1049541 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 1070596 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 1259216 22461916 ~ 22485655 (+)
LOC122323670 NA other downstream 189368 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 299132 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 312859 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 337285 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 495319 24241872 ~ 24249991 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G725985 NA non-coding NC_048572.1 CM023226.2 57876825 ~ 57877752 (+)
mexican tetra (Astyanax mexicanus) G151587 NA non-coding NC_035913.1 CM008316.1 13428566 ~ 13429759 (-)