LOC122327425 (LOC107728372,LOC107569261,LOC107681443)


Basic Information

Item Value
gene id LOC122327425
gene name LOC107728372,LOC107569261,LOC107681443
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24059412 ~ 24062202 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22264
gaTTGTACGTTTAAAGTTGTCCTGTAATGGGAAATGTACATTAAATGATCCCTCTCTACAGACTGCCTTTCTAAACATGATAAGTGAAAAACTGAAGAGCATGGGGCTAGAAAGTGACAACATTAAATGGATCCAGAGGGAAGACGAAGAGGTGTTTCATCTAGAGAGCAAACATACAGAAAAATCAAATAATCAGTGTAAC
>XM_043222786.1
ATGGATGGGAGTCTGTTTGTGCTGCTTGTGCTGTCAGGGCTTCTGAAGACCACTTCTGGTCTCTCTCGTCAGTACTACTATATAAATGCGAGAATGTCATGGCCAGAGGCTCAGAGTTACTGTAGAGCAAAACACACTGATCTGGCTACTGTAGACAGCATGGATGATGCAAGCGGGCTGATAAATTTCGTGGATGCTGGATACAGTGGATCAGTGTGGATTGGACTGAAGAGGGGGACACAGAAACGCTGGGTTTGGTCTAATGGAGAAGATACACTTGCAGAGTACAAGGCCTGGGGTGCAGGAGAACCGGACATTCGAAACAATTGTAGCTTTCTTGCCTATGGAGTTTGGAATACTTTACAATGCTCAACTTTGATTTACTTTGTGTGCTACAATGGTAACACTGGATACATTTGGGTAAAGAAGCAGAAGAACTGGACAGATGCTCAGAGCTACTGCAGACAGCAATACACAGATCTGCCTACCATCCACAACGCTGTGGAACACAATCAGCTCAagagtattattttatatacatcaTGGGTCTGGATTGGTCTGTTCCAGGACTATTGGGAATGGTCTGACAAATGGAGCAACTTCTTCAGATACTGGGCAGCAGGTCAACCACGTCAgacatcaggatctggtgactGTGTTGGCATGACAACAGCCGATTCTGGGAAATGGATTCATGAAAGCTGTGATCTACACCATCCTTTTATCTGCCATGGATGGCCCAAGTCTCCTTACCGCACATACCAGTATATGAATGAAAGCATGATCTGGCAAGATGCACAGAGTTATTGCAGAGCGAGATTCACTGATCTGGCCACTGCTGACACCATGAATGATGTGAGAAGGCTAGTAAACATAGTGGATCCTGGATACAATGGATCAGTATGGATAGGTCTCCACACCGGGACTCAGTCTCGCTGGGTCTGGTCTATGGGGGAAGGCACAATCTCTAACTACACTATCTGGAACCCAGGAGAACCTAGTGGTGATGGGAAGTGTGTGAGGACTTTTAATGGAAGCTGGTATGATGAAAGCTGCAGCACTCTTCTCCCATTTGTGTGTTTCAATGACAGCACTGGTTTTATTACAACTGAATCTGCTATGACATGGAGAGATGCTCAGAGTTACTGCAGACAACAACATACTGATTTAGCGAGCATCAGCAGCCCAGAGCAGCAGAATCTGCTCAGTAATGAATTGTCGCTCTGGATTGGTCTGTTTCTGGACTCTTGGGAATGGTCTGATCAATCCAATCTCAGTTTTAGACACTGGGACGCAGATCAACCATCACAGACTTCAGGATCTGGTGACTGTGTTGGCATGACAACAAACAATTCTGGGAAATGGACTCAAAAGAGCTGTGATCTACAGCAGCCTTTTATCTGCTATGGAGctgacaaattaataagaaaacagaTTGTACGTTTAAAGTTGTCCTGTAATGGGAAATGTACATTAAATGATCCCTCTCTACAGACTGCCTTTCTAAACATGATAAGTGAAAAACTGAAGAGCATGGGGCTAGAAAGTGACAACATTAAATGGATCCAGAGGGAAGACGAAGAGGTGTTTCATCTAGAGAGCAAACATACAGAAAAATCAAATAATCAGTGTAACAGGAAGTAA

Function

NR:

description
PREDICTED: macrophage mannose receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22264 False 202 lncRNA 0.37 2 24061884 24062193
XM_043222786.1 True 1644 mRNA 0.45 7 24059412 24062202

Neighbor

gene id symbol gene type direction distance location
LOC122324443 NA coding upstream 27209 24029004 ~ 24032203 (+)
LOC122328481 LOC107599284 coding upstream 62262 23995183 ~ 23997150 (+)
LOC122323657 NA coding upstream 127523 23929631 ~ 23931889 (+)
LOC122323665 NA coding upstream 133781 23920231 ~ 23925631 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding upstream 273157 23783724 ~ 23786255 (+)
LOC122327432 LOC107549368 coding downstream 9007 24071209 ~ 24073204 (+)
LOC122324938 NA coding downstream 16954 24079156 ~ 24081504 (+)
LOC122326195 NA coding downstream 47461 24109663 ~ 24111683 (+)
LOC122327448 NA coding downstream 50575 24112777 ~ 24115107 (+)
LOC122327453 NA coding downstream 54540 24116742 ~ 24117634 (+)
G14996 NA non-coding upstream 35804 24009525 ~ 24023608 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding upstream 64291 23994510 ~ 23995121 (+)
LOC122328496 NA non-coding upstream 64901 23993475 ~ 23994511 (+)
LOC122328475 NA non-coding upstream 73209 23985758 ~ 23986203 (+)
G14989 NA non-coding upstream 131799 23927294 ~ 23927613 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 79038 24141240 ~ 24141921 (+)
G15029 NA non-coding downstream 83932 24146134 ~ 24147389 (+)
G15039 LOC108433105 non-coding downstream 113083 24175285 ~ 24211058 (+)
G15041 NA non-coding downstream 124422 24186624 ~ 24250684 (+)
LOC122325249 NA non-coding downstream 158784 24220986 ~ 24231256 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 10947 24045685 ~ 24048465 (+)
LOC122323670 NA other upstream 120396 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 511438 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 1054158 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 1364082 22691199 ~ 22695330 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 21636 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 179670 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 431236 24493438 ~ 24499685 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 625354 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 1108534 25170736 ~ 25175288 (+)

Expression


Co-expression Network