LOC122327442 (LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444)


Basic Information

Item Value
gene id LOC122327442
gene name LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24083838 ~ 24096897 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22269
ggtgagtccgtgtgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccgCAGTGAGGATCTGTGTGAGCAGTCATGGACGGGGGTCTGTTTGTGCTGCTTCTGCTGTCAGGGCTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCCGTActtctatataaatacaccaATGTCGTGGCCAGATGCTCAGAGATACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAACATGGATGACGTGAACAGGCTGGTAAATATAATAGATGCTGGATACAGTGGATCAGTGTGGATTGGACTGATGAAGGGGACACAGAAACAGTGGAGTTGGTCTAATGGAGAAAACACAACTTCTCAGTACTATAAC
>XM_043222812.1
caCATATTTGCAGTTTAAGCTTTTATGTCATTCAACAAACTAATACAGTAAATGTATGATGTTTTTGATCATTACAGCAGTGAGGATCTGTGTGAGCAGTCATGGACGGGGGTCTGTTTGTGCTGCTTCTGCTGTCAGGGCTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCCGTActtctatataaatacaccaATGTCGTGGCCAGATGCTCAGAGATACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAACATGGATGACGTGAACAGGCTGGTAAATATAATAGATGCTGGATACAGTGGATCAGTGTGGATTGGACTGATGAAGGGGACACAGAAACAGTGGAGTTGGTCTAATGGAGAAAACACAACTTCTCAGTACTATAACTGGGCTTCAGGACAGCCAGATGCAGATGGAGATTGTGTTGTTATTAATTCTGGATTTTGGCATGATATGTCATGTAGTAATAACCGATATTTTGTGTGCTACAAAAGTGATGGATACGTCTTTGTAAAAAGTGATAGAAACTGGACAGATGCTCGGAGCCACTGCAGACAGTATTATACCGATCTGGCCACCATCCACAGCTCTGTGGAGAATAAGCAGATAACTACGCAAATTTTAACCGGAACGTCCTTCTGGCTTGGTCTGTTTCTGGACTCTTGGGGATGGTCTGATCAGTGGGATCTGAGTTTCAGACACTGGGCAGCAGGTCAACCTTCCCAGACTTCAGGATCTAACTGTGTTGGCATGACAAGAACCGAGTCTGGCAGATGGTCTCAGTACAGCTGTGATGTACAGCAGCCATTTATCTGCTATGGAGGTGATTCTGCTCTTTCTCGTCCGTACttctatataaatacagcaaTGTCGTGGCCAGATGCTCAGAGTTACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAACATGGATGACGTGAACAGGCTGGTAAATATAACAGATGCTGGATACAGCGGATCAGTGTGGATTGGATTGAAGAAGCGGACACAGACACGCTGGAGTTGGTCTaatggagaaaacaaaaactactatAAATGGGGTTCATTACAGCCGAATGGAGATGGAGTTTGTGCTGCTATATATTATGAGCTTTGGCATGATGCATCATGTGACTTGAATCTATACTTTGTGTGCTACGAAAAGTCTGGATACATCTTGGTACAGAGCTCCAAAACATGGAGTGACGCTCAGAGCTACTGCAGACAGTATCACACAGACCTGGCCACCATCCACAGCTCTGAGGAAAATGATCAGATAAATCAAATTCTTTTACTTAGCAATTACATCTGGATTGGTCTGTTTCTGGACTCTTGGGGATGGTCTGATCAGTGGGATCTGAGTTTCAGACACTGGGCAGCAGGTCAACCTTCCCAGGCTTCAGGATCTAACTGTGTTGGCATGACAAGAACCAACTCTGGCAGATGGTCTCAGTACAGCTGTGGTCTACAGCAGCCGTTTATCTGCTATGGAGatGACATAAGAAAACAAATTGTGAGATTGAAAGTCACATGTAAGGGAAAATGTGCATTGAATGATCCTTCACTACAGGCAGCTATTCTGAATAAGATAAGTGAAAAGCTGAAGAACATGATGTTGGAGAGTGAAAGCAACATAAGATGGAGAAAGGGAGGGGATGGAGAGGTGTTTCATCAGGAGAACAACCATATAGTGAATTTAGATAGATTCTTGGGTCTGATGAATAGAGCTGCTTCTTCAGAGACTGAGCAGCAGGTCAACCATCTCAGAGTTCAGGATCCGGTGACTCCGTTGAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22269 False 376 TUCP 0.50 3 24083838 24088441
XM_043222812.1 True 1811 mRNA 0.44 8 24087971 24096897

Neighbor

gene id symbol gene type direction distance location
LOC122324938 NA coding upstream 2334 24079156 ~ 24081504 (+)
LOC122327432 LOC107549368 coding upstream 10634 24071209 ~ 24073204 (+)
LOC122324443 NA coding upstream 51635 24029004 ~ 24032203 (+)
LOC122328481 LOC107599284 coding upstream 86688 23995183 ~ 23997150 (+)
LOC122323657 NA coding upstream 151949 23929631 ~ 23931889 (+)
LOC122326195 NA coding downstream 12766 24109663 ~ 24111683 (+)
LOC122327448 NA coding downstream 15880 24112777 ~ 24115107 (+)
LOC122327453 NA coding downstream 19845 24116742 ~ 24117634 (+)
LOC122325496 LOC107698467,LOC107713624,LOC107600258 coding downstream 452398 24549295 ~ 24551538 (+)
LOC122327477 LOC107653347,LOC107731078,LOC107585662,LOC107568542,LOC107675751 coding downstream 523090 24619987 ~ 24626282 (+)
G14996 NA non-coding upstream 60230 24009525 ~ 24023608 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding upstream 88717 23994510 ~ 23995121 (+)
LOC122328496 NA non-coding upstream 89327 23993475 ~ 23994511 (+)
LOC122328475 NA non-coding upstream 97635 23985758 ~ 23986203 (+)
G14989 NA non-coding upstream 156225 23927294 ~ 23927613 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 44343 24141240 ~ 24141921 (+)
G15029 NA non-coding downstream 49237 24146134 ~ 24147389 (+)
G15039 LOC108433105 non-coding downstream 78388 24175285 ~ 24211058 (+)
G15041 NA non-coding downstream 89727 24186624 ~ 24250684 (+)
LOC122325249 NA non-coding downstream 124089 24220986 ~ 24231256 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 21636 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 35373 24045685 ~ 24048465 (+)
LOC122323670 NA other upstream 144822 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 535864 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 1078584 23003165 ~ 23005254 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 144975 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 396541 24493438 ~ 24499685 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 590659 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 1073839 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 1125247 25222144 ~ 25236609 (+)

Expression


Co-expression Network