G15039 (LOC108433105)


Basic Information

Item Value
gene id G15039
gene name LOC108433105
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24175285 ~ 24211058 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22305
tttaaaaaaaaaaaaaaaaaaaaaattaaaaataagtagcactttccagcactgataataataataataataataataataataataataacatgtttattgagaagcaaatcagcatataaaaatgtgacaCCGAtcgtaatgatgctgaaaattcagctttgcatcactatattttttaaatatattaaaatagaaaacagttgttttaaattgccaTACTATTTCGtgttattatagattttttgatcaaataattgttgccttgatgagcataagagacctctttaaaacaacacaaatctgAACTTAATCATTTAATCATAGATGTTGGCAAACATTTCTACACTAGCACTAGAAActaaaataaggaaaataaatattttcgtGTGGACCTTGAAATCATTCCTACTCTTCTGAACATTTACTCCTCTGAAGTGAGCATactaaaatttttataataatgcatttaaagtatTCAGTGATGTTAAAGGTCCAGAATGACTGTTactctgcacaaacacacatcagtGTATCGCTCATGACAGTGCTGTTGAAGgtttttagcataattttatCTAGGATCAGTGTAGTTTCTTCAACATATgatgaataatattaaagtgGGATTAATCGTCCGTGCAAACTGAGACCGTAATTTTCACGTGTTTATTTTGAACACattcatccattctttctttgCTACAGAAAACGCAGAAAATCGAACCTGATCCAAACAGTCTTTTATGACAGACGAGAGTTAATTCTCAGACAACTGTCCCAAAAGAAACTGTAACAAGAAATACTTCTGAATTACATCAACAATTCATTAAAGAGaccatcagaaaaaaaaatataaaactcagCCTTGGACATAAAACTCTATGTTCTCTATATTTCAAAatccatttattattaaaagtctTTCGAAAAATGACCGCAACTGTTCCCTTTAactcaaacatttctttgagtgtaaaaaaatataataaaaccctGTTTCGGTTGCTGTTTCGTTCATATCCCTTTTTAGTTTTGATTGTATGTATTTGTTGTATGCATATAGAAAATATggagaatttattttttgtcaagcTTGTATACAGCTCGTTTTCGAATAAAGCACACGGCAAATAAAAAACCAAACATCTTGAATAACTTAACCAGAAAGATCACCCACAAACCAGTCCAGACCAGCATGGGAAAAGACCTTTGCCAGCTGGTTTAAGACACGCACCCCTGGTTGCACGACATTAGAAATATGTCAAAAAGAGCCTGTTGAAGTGTTGGAAGtattcactgattattattaataacttctCTCATTTAGTCCGCAGCAGCAACGGAGCAATTAGTTATTTGTTGCTACGAACGCATTCGAACTCGATAAATAAGAGACGAGAAGGACAGCAGCGTGTTTGCATTGGGTCGAATACGGCTGATCAATCACAGGGTGATGTTAATTTCTACATTGATTTCATTAGGAAGTCGAAAAGTTGCAGTGGCCTAATGGCATTCGATATCTCTCGCGTTTGAATCCATTTAAGCCATTTATCATCTAGATCCACTCACACAATGACATGACTCTCCCGGGCTGTTCGGCAGTCGAGAGCGCGTGCTAAATTTACCACCGGCTGACTCTTAAGAAGCTAACGCTAAACTCCGCTGTGATGTTGCAAATTGGAATGTAACGTCGCCATAGTAACACGTTCACTTTATTTTCAGGTGCACGTGAAACCAGCCAACGTGACTGTGAACGACTTGCACCGGCTTGTTCTAAAAGatcgtttttaaaaatagtaccGCTCTGGCTGAACACTTAAGAAAGAAAGGCAGTGAAACGTTAAAGACGGTTAGGTTGGAACCGATGCGAATCAGACACGTTAGCTTGGTTAGCTTCGCCTATGTTTTGGTCGCGTTTAAAGCGCCCCTGTTAGGGGTTTtggaaaatgagctttcatgcagcGTGTGGTGAAGTTTTCAATCTGAAAGCGACCGTATAAAGTCTCtcgaaagaaagagtcgactccgaatcactgaaacgagtccCGAGCCGTTTCATGGTGATGTCAGAatgaaacatttgaatattGCCCTCTCTCTTTTTGGTCTTTTCGCgtcggtctgaatgaaaatgctaattcgttCGTTGCCACTAGGTAGGTGCCGCTTTGAAGCGTTAAAaggctgctttaaatgaaatcgaccaatcactggaggggtttggagaaatgaatcgtttgggagtcactGGACAAATGAGGTAAAAAATAGATTCAcattatttaattgtgtttgaccttgcatgcatgtgaaCCTGTtctttgggactcccaaaactaaaatgtgaatctttcataacccataacaggggcactttaaagggaaagttcacccaaaaatgtatttacgcACACCTGCATGGGTTTCTTTCTTCTATTCAACACAAAACATGATATTTCGAAGAACGATATATTCATGAATATGAATTCTGTTCAACAGAAGGCTTGGAAGAagatgaaggtgagtaaattatgacagaattttctttttttggtaaactatccctttaaggcaaCACCGCACGAGTCCTTCGCAGGTTTTATTTCGGTAGTTAGGATGATGTCTAAGTCGACGGCAGACAATGAGGCATCTTACTAGGCTTTGAAATAGAGCTACTGTGTGAATTCAAAGGCAGTGTTGTCATGAAACATCAAAAGTTAAGATTGATTCTGACTGAAAATACAGGAAGGAGACACTAGGATTTCCCCCTTGGGGAAAGTATTCTATGCTAGGCATTAGCgactatacatttaaaaatctaactCGAAGAAGAAGGCTTGGATCGCTGAAAAATCCAGACTAAAGTTAAATTTACATCAACTGTGGGCTCCTTCGAATATTTCCGTACCTTTTTACATTCTTGCATCCTTTTAAGCCTCagactctgattggtcagtggTCACACTGCCGTTCTGCTCTCCCACAACCGATTGGTCCTGGGTATTTGTGACTCCACCCACAGTAAATGTTGGCCCGTCTCCCTCCCTGACCGATTCTGAATCAGTGGACTTCCCCGTTTGCTCAGTCAGATTAGGCCCCTCCCATTTCTCTTCATCAAGCCTACTGGAAATCGACCAATAGAGATGAGCGTCCAAACGGGCAGCAGCCAATGCAAGTTCTCTCGC

Function

NR:

description
PREDICTED: G protein-activated inward rectifier potassium channel 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22305 True 3188 lncRNA 0.37 2 24175285 24211058

Neighbor

gene id symbol gene type direction distance location
LOC122327453 NA coding upstream 57651 24116742 ~ 24117634 (+)
LOC122327448 NA coding upstream 60178 24112777 ~ 24115107 (+)
LOC122326195 NA coding upstream 63602 24109663 ~ 24111683 (+)
LOC122324938 NA coding upstream 93781 24079156 ~ 24081504 (+)
LOC122327432 LOC107549368 coding upstream 102081 24071209 ~ 24073204 (+)
LOC122325496 LOC107698467,LOC107713624,LOC107600258 coding downstream 338237 24549295 ~ 24551538 (+)
LOC122327477 LOC107653347,LOC107731078,LOC107585662,LOC107568542,LOC107675751 coding downstream 408929 24619987 ~ 24626282 (+)
viml viml,LOC107656138,LOC107600213,LOC107599242,LOC107757824 coding downstream 631720 24842778 ~ 24849115 (+)
pde1cb pde1cb,pde1c,LOC107713666,LOC108280739,LOC108433077,LOC107712805,LOC107663536,LOC107599240,LOC107757825 coding downstream 639705 24850763 ~ 24919804 (+)
neurod6b neurod6b,LOC107713643,LOC107656134,LOC107599290,LOC107663516,LOC107757826,LOC107600270 coding downstream 720524 24931582 ~ 24934535 (+)
G15029 NA non-coding upstream 27896 24146134 ~ 24147389 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding upstream 33364 24141240 ~ 24141921 (+)
G14996 NA non-coding upstream 151677 24009525 ~ 24023608 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding upstream 180164 23994510 ~ 23995121 (+)
LOC122328496 NA non-coding upstream 180774 23993475 ~ 23994511 (+)
LOC122325249 NA non-coding downstream 9928 24220986 ~ 24231256 (+)
G15058 NA non-coding downstream 40087 24251145 ~ 24251814 (+)
G15059 NA non-coding downstream 44147 24255205 ~ 24422012 (+)
LOC122326923 NA non-coding downstream 216928 24427986 ~ 24435655 (+)
G15067 LOC107698501,LOC107600225,LOC107713654,LOC107757806,LOC107662989,LOC108280913 non-coding downstream 289181 24500239 ~ 24501316 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 78388 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 113083 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 126820 24045685 ~ 24048465 (+)
LOC122323670 NA other upstream 236269 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 627311 23545106 ~ 23547974 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 30814 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 282380 24493438 ~ 24499685 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 476498 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 959678 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 1011086 25222144 ~ 25236609 (+)

Expression


Co-expression Network