G15067 (LOC107698501,LOC107600225,LOC107713654,LOC107757806,LOC107662989,LOC108280913)


Basic Information

Item Value
gene id G15067
gene name LOC107698501,LOC107600225,LOC107713654,LOC107757806,LOC107662989,LOC108280913
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24500239 ~ 24501316 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22341
GAGCGAATCACTCAAAATGTGGTGAAGTCTCACCTGGAGACGTGTCAGTACAGCGCAGAAGAGCTGAAGAAACTCACCTGGAACCTCTACACGTCTGAAGAAACCCGCAGCTTTCAGCTCAAGTCTGCAGAGTGGATGTGGCAGCAGTGTGCCCTGCACATCACAAACGCCATCCAGTACGTCGTGGAGTTCGCCAAGCGCATCTCTGGATTCATGGACCTCTGCCAGAACGACCAGATCATCCTGCTCAAAGCAGGTCAGTGCTGCCTTTGTCACACGGATTACAAATGACTAATCCCAGATTATACAACCGATTTCTCACTCGCATCACCTTATCCACTCACTGCCATGGTGTGGCATTTCTGATGTGGCCCTGGGCGGCCGTTCAATCTCTTTATTAGTTTAATCACATTTAGTAATGTTCTAACACCGTTCCAGAACACACTTGGGTTCTTTAGCGTTCTCTTTTTTGCTACATCTTGAATACTCTGGGAGCCGATATTGACATGCAGTTCAGATAATGGCAAAAGCACAAACACCCAGAAAATTAGTGTTGAAAGCTGAAAGTACATCTTGTGAATCCTTTTTGGATATATGCCTGGTTAGATTGCACTTACATAATATTATGCAGCTTTTTAAGCGTAAAAGAGGCACAACTGTTTCGTGAATCCGCCCACAAGACTTAATTCTGTCCATGTTAAACCTGAATCTCGCACTAATGTTTGTCTCCTCTTCTGTTTGTTTCTCCAACATTCTGTCTACTTCTTTGTCTTTGTGCTTAccgtaattaaaaaaaaaaaaaaaaaaaaaaaaaactttttcttaatgtcatttaaaatgatacactGACTTCATTTTGATGGTCACATATTTGgagaaaaattataattaaatttttttctctgtatttttgcaCGTGGAGCAAATTCCCATTTTTCATTCCCTC

Function

NR:

description
PREDICTED: nuclear receptor ROR-beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22341 True 946 lncRNA 0.46 2 24500239 24501316

Neighbor

gene id symbol gene type direction distance location
LOC122327453 NA coding upstream 382605 24116742 ~ 24117634 (+)
LOC122327448 NA coding upstream 385132 24112777 ~ 24115107 (+)
LOC122326195 NA coding upstream 388556 24109663 ~ 24111683 (+)
LOC122324938 NA coding upstream 418735 24079156 ~ 24081504 (+)
LOC122327432 LOC107549368 coding upstream 427035 24071209 ~ 24073204 (+)
LOC122325496 LOC107698467,LOC107713624,LOC107600258 coding downstream 47979 24549295 ~ 24551538 (+)
LOC122327477 LOC107653347,LOC107731078,LOC107585662,LOC107568542,LOC107675751 coding downstream 118671 24619987 ~ 24626282 (+)
viml viml,LOC107656138,LOC107600213,LOC107599242,LOC107757824 coding downstream 341462 24842778 ~ 24849115 (+)
pde1cb pde1cb,pde1c,LOC107713666,LOC108280739,LOC108433077,LOC107712805,LOC107663536,LOC107599240,LOC107757825 coding downstream 349447 24850763 ~ 24919804 (+)
neurod6b neurod6b,LOC107713643,LOC107656134,LOC107599290,LOC107663516,LOC107757826,LOC107600270 coding downstream 430266 24931582 ~ 24934535 (+)
LOC122326923 NA non-coding upstream 64584 24427986 ~ 24435655 (+)
G15059 NA non-coding upstream 78227 24255205 ~ 24422012 (+)
G15058 NA non-coding upstream 248425 24251145 ~ 24251814 (+)
G15041 NA non-coding upstream 249555 24186624 ~ 24250684 (+)
LOC122325249 NA non-coding upstream 268983 24220986 ~ 24231256 (+)
G15066 rorcb,LOC107757806,LOC107662989 non-coding downstream 1436 24502752 ~ 24506398 (+)
G15069 NA non-coding downstream 6570 24507886 ~ 24513061 (+)
G15071 NA non-coding downstream 22108 24523424 ~ 24602792 (+)
G15165 NA non-coding downstream 287569 24788885 ~ 24840993 (+)
G15169 NA non-coding downstream 295497 24796813 ~ 24797564 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other upstream 554 24493438 ~ 24499685 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other upstream 250248 24241872 ~ 24249991 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 403342 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 438037 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 451774 24045685 ~ 24048465 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 186240 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 669420 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 720828 25222144 ~ 25236609 (+)
LOC122327519 hecw1b,hecw1,LOC107600217,LOC107662981,LOC108280656,LOC107576258,LOC107656133 other downstream 892840 25394156 ~ 25406903 (+)
LOC122362387 LOC107722547,LOC107680242,LOC107550619,LOC107688474,LOC107709878 other downstream 990944 25492260 ~ 25516180 (+)

Expression


Co-expression Network