G15236 (LOC107558270,LOC107558271,LOC107713634,LOC107655863,LOC107757833)


Basic Information

Item Value
gene id G15236
gene name LOC107558270,LOC107558271,LOC107713634,LOC107655863,LOC107757833
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25111261 ~ 25115138 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU22600
aatcaattaaaatatccCTTTATGTACAGATTGAAGTTAGAACTAAACCTTacacaaacaatgaaaatgctaaaatatatagtaGCTCCATAAATAAAGAACAGTTCTTAATGCAAATATTCAGTAATCAGATTTCAATTTTTGGGGGTGGTTTTCTGAAGTGGTGTAACTAATCTGACCAATCTCTGGTGTGGTAAAGAGTGTGTGATGCGTCTGATGTGTGTTTCGGTTTTGCTTCTCTCATCATctagaataaaaatagaaaagcagAAGAAAGTGTACCTCTGCAAACGTTTGCACCAATGCATAGGACATTTTACAGATGTGGCAAGACATTAAAGTAATAACCTGACAAGCCATGACCCTGCGTGTGGAAAACACTTAAGTTCCCGTTTTTCTTCTTCAAGTGAACTCTTTACGAGAAACAGTGCATGATGCAAAACAGATGACGATGCCGTTATTTaacaatgcaatattaataatgtgaaTGGCCAGATATCCTACGCTAATAATGAAGTTGGGGAGTGCTGTAGATCACTTCAACTTGTTCGGAACGACGGCCCtgagaataatttaataaaacacaagacagagTGAGTTGAATTTCAATAAGTCAGTGATTAAAATCGAGGCCGTTATGCATTTCCACAGATAGTATCACGAGATCAAATAGATTACATCGTAGTCTTTCGTAAGGAAAGGGCTGTCGTCATGTGCATTAGTAGCATATCAGCAATGTAATGCTTGCAGTGACCACCTGGTTTTGTTCACGGTCTTCTGCTTTCTTGAACACCACAGTGTCGTACGCGACAGTCACTGGATCTTCTGCCTGtcaaaggaaagagaaaaactcatttaaaagaCTATTTAGATATAATGAGGGTTATGCCGCGCACGGGCCCATTAACATCAAGAACGATGAGATCCACACCAACGCACAATAAACAAGCTCAAATGATAATCGAATGTGCTCCAAAACTAAAACTTCATGAAAATTCGTATAAATAGCAGGctatgataaataaaaactaaaactcgTGCTGTTGATGCCAAAAATGGACTTTGAGGTAGCGATGCGCATATGATGCACAGCTTTCTCCTGCATATGATTTGAAATTTGTCAGCGTGCATATATAAACGAAAACTTATCACTGTAGCAGTCGAGACCAAGTCTAGACCGAGACCAGAGACCAAGACAAGACCGAGACTTTAAGGGTTTGAGACCAAGACCAAGGCAGGGCGAGACCCACCATCATTTGAAAGAATTAAAATGACTGTGAAATGTcttgaaaaacataataaaagtcaTCTCAGGGGtaaattttactattttataaaaatgttttggcaaacaaatacatttaccaGCTAAAAACAGCTTAACCTATTTTATTCAACACTTATCATATGTTTTATCATAAGACTAACATATTactatgtttttgtatttattgtaaacaaaaaagcaaaacattgaacatttaaaatgctgaaaattgtaaattgtaaagaTATGCACTGggtttcaaatgttttttttataccaaaacaacattttttggatcagaaatattaatacagtacaattttattacaatttcagtaataataattgaataattaataaaaattgagctgtaaatatatattagaatgatttctgaaggattgtgtaaACGTCAGCTTTGATAACAGcagtaaattacattaaaaaaaatatatattaaaagagaaaccactgatttaaattgtaataatgtgtccaataatacaattttaactaTTTCtactcaaataaatgcagccttgttgagcaagAGACTCCGTTCAGAAACGTGAAAAATACCCTGAGAACTCCTTCAACTAAAacgataataaataaaaataataataattacactttACGTTAAATATTTCTCTGATAGTCTAAACTGCACACAAGTGCTTTAACTTCATTTAGTGACCTAACCGCACGTGgctcagaaataaaagttgtatttaaaattcTGTATAAAATATTGGTCATTTAATACTACTTCTTCTTTATCGAACGCTTGTATAAATATAACGTTTGCCAATGGTGCACACGTTTATGCAAActgctctctttcttttgtaTCGCTTAATTATATCAAGTCGTATAAATACGAGAGCAACAGTAGCCTAACAAGACAAATCAGTATAGAAATATGTTAGTATGGACTTATATTCAATCTCGTGATGTTCAAACGAAGACTATGCAGTTGCAATTTAGCGATATGCACACAGTTGTGGTCTTGACCCATCTTGAAGTTGAATCCCGAGTCCTCTTAGTGTGAGACCAAGACAAGGCCGAGTCCGAGATAAAAAATGGTCTTAGGAGCGGTCTCAAGTATTACAACACTACTGCTTATCATCCTATTAATTGCATAGCCCATatgacatttttgcatatctCTACcacacgtttttgtttttatgtgccgtactatttacatgcacattcacaggtagatttttttttttcattcagttttactCTATTGATTGCCTCTCGTCGAATTCTGGTCCCCGagagatgcaaaaaaaaccacTAACGGTCTAAAATTAGCCCAGCTCTGCATTAAAACCGTGGACCTGGCAACACCGCACACAGATTCAGATCggttgttaatgtttttatatcctTATGAAAATCGTTTCTCCGCGTCCTTATCTTCGTAATTGTGGCGTGAACTTCTGTATTCTCAGAATCAGAACGGGTGTGAAAATGACATTAAGGACTAAAACACTTACCACAGAACAGATGTCTGGTCCTGGTTTGGACCAAGCCCCTTTATAAAACAGGAAGAAtgtcataaatataaaaaaagggaacgagaaaaaaaaaaaaaagctagatatacaaatgagaaaaataagtgATATTCATGGGGAGTTTTCAGCAAGGTAATGTAATGCGACAGTGCAATAACTCCTGTGAAATTGGATTTGAGGCATTAGCGGTGAAATAGCGCTTTGAATTGAATATATAAGTGTTAGAACTGACTGTGTTTTTGTATAAGCCTCCAGATGAATATAACCAGCATCAGTAAGAGAAGCAGCGACACAGATATGTAGAGGAGGAGAAACCAGTCCATCCGGTCAGAAGAGTCTTCGAGAGGGAAGCTGCTGTCCATCGTGTCGTTGCTTCCTGTTTGGTTTCTgcatatgttattaaaattgaaataatggGTTGAATATAAGCATAattaagaaaagtgttttacCTTTCAAATATTTTGACCTCTAACTAAATATGCGAGTAtgtctataataataataacccttAATTGTTTGACTTGATAAATTCAAGACTTACGGAAATAGACCAGAAATAGACTCATCACATTCAGCTGAGATCAGAAGACAAagagcaaaatatatatatactgaataaaTAGCTTAGAATATATAAAgagcactttaaatatatacgAATGCAagtgttttgtaaatgaatgggtttttttcaaaacataactcacatgtatttttatattgagcGTTATTATGAACATGAAGTTCAACAGGAGCCTGCAGATCTCCTACAGAGCAGAAGTACCAGCCAGAATCAGTCAGTCTCAGTCCAGTCATCAGCACAGTGAAGGATCTTCTCCCATCATCATCACTGATCTGGACTGATGAACTCTGGGATGTGTCAGTCCTCCCCACTGTGTAACATCTCTCATCTTTATATCTGCACCACTGTTTAGTTTTATACTGATATCCAGAACTGTAGAGACACTGAACACTGATATCTCCAGCTTCACGTCCAGATACACTGCTGCTCACCACAGACACATCAGGAACTGAACACA

Function

NR:

description
PREDICTED: CMRF35-like molecule 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22600 True 3839 lncRNA 0.37 2 25111261 25115138

Neighbor

gene id symbol gene type direction distance location
lrrc24 lrrc24,LOC107713676,LOC107655866,LOC107600207,LOC107757831,LOC107599237,LOC107663504 coding upstream 485 25089791 ~ 25110776 (+)
eef1da eef1da,LOC107713671,LOC107757829,LOC107663523,LOC107599238,LOC107600209,LOC107655868 coding upstream 48751 25051270 ~ 25062510 (+)
trnal-uaa_14 NA coding upstream 60622 25050557 ~ 25050639 (+)
trnal-uaa_13 NA coding upstream 61575 25049604 ~ 25049686 (+)
trnal-uaa_12 NA coding upstream 62129 25049050 ~ 25049132 (+)
crygn1 crygn1,LOC107600194,LOC107713687,LOC107655847,LOC107558278,LOC107696799,LOC107729968 coding downstream 101350 25216488 ~ 25219623 (+)
LOC122363040 abhd4,LOC107713680,LOC107663512,LOC107655861,LOC107729967 coding downstream 185062 25300200 ~ 25304723 (+)
LOC122322894 zcchc2,LOC107757820,LOC107662991,LOC107599249,LOC107713659 coding downstream 300381 25415519 ~ 25419928 (+)
LOC122358952 LOC107586591,LOC107722548 coding downstream 456003 25571141 ~ 25574135 (+)
LOC122358930 crtc1a,LOC107709901,LOC107680255,LOC107722627,LOC107585074 coding downstream 465662 25580800 ~ 25591012 (+)
G15165 NA non-coding upstream 270268 24788885 ~ 24840993 (+)
G15189 LOC107757823 non-coding upstream 294831 24813299 ~ 24816430 (+)
G15169 NA non-coding upstream 313697 24796813 ~ 24797564 (+)
G15071 NA non-coding upstream 508469 24523424 ~ 24602792 (+)
G15069 NA non-coding upstream 598200 24507886 ~ 24513061 (+)
G15240 NA non-coding downstream 8162 25123300 ~ 25145006 (+)
G15233 LOC107600201 non-coding downstream 34117 25149255 ~ 25157235 (+)
G15250 LOC107713636,LOC107655860 non-coding downstream 74882 25190020 ~ 25330287 (+)
G15226 NA non-coding downstream 84553 25199691 ~ 25206930 (+)
G15392 NA non-coding downstream 350312 25465450 ~ 25595289 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other upstream 356670 24687556 ~ 24754591 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other upstream 611576 24493438 ~ 24499685 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other upstream 861270 24241872 ~ 24249991 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 1014364 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 1049059 24059412 ~ 24062202 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 55598 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 107006 25222144 ~ 25236609 (+)
LOC122327519 hecw1b,hecw1,LOC107600217,LOC107662981,LOC108280656,LOC107576258,LOC107656133 other downstream 279018 25394156 ~ 25406903 (+)
LOC122362387 LOC107722547,LOC107680242,LOC107550619,LOC107688474,LOC107709878 other downstream 377122 25492260 ~ 25516180 (+)
G15410 crsp7,LOC107722610,LOC107688472,LOC107585090,LOC107550620 other downstream 484323 25599461 ~ 25599926 (+)

Expression


Co-expression Network