XLOC_006631 (itprip)


Basic Information

Item Value
gene id XLOC_006631
gene name itprip
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 25403413 ~ 25408387 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012799
GGTCACTTCCTGGATGTGAGAGCAGCTTCAAGTCGTCGTGTGGAGCAGATGAGGAAACCGAGGAGTAACGGAACCGCGCTTTCTCTCGTGTCGGTTCAGTTTCAGGCTGAAACAATGAGCAACGCTGGACTTTAACTCTTGGATTACGGTACACACACTAAAGGATGCAAGGTGCGATTGCACGAGTTTGCATGGTGGTAGTAGCGGCAATCCTCAACCACCCCCTTCTTTTCCCCAACGAAAACACCACCGTCCCCGAGCAAGATGAAGACCTCCTGGCCCGGATGAAAGAGCATCAAGAGAAACTTGAGGCTGAACAGAAGCGCCTGGAGCAGGAGATCTCACAGAATGAAACATCTGTGATCGGTGATCAAGACGGTTATGGCTGGTACTTTTGGAGTGCCCTCTGCCTTGTCATTTTCTTTACGATTGAGGTTTGCAGGCAGGATATAATCCCTGCTGAAATTCCAGACCCTGCAGAAGACGAAGATGGAGATTGCAGTACTGGTTATCTCAGCGCTAAGTCTATCGTATTAGATAGAGGTACCCTAAATAACTTCTGCAGGACCCGCTTCTTTCCTTACACCAATGAAAGTGGTAGAGTGCGGGAATTTATTGAGGGCTTTGCTGATGATTTGCTGGAGGCATTGAGAAGTATTTGTGACCTGGAAGCTGACCTGGAAGTTGAGGACTTTGTTGGGATAGGCAGTATGTTCGAATCCTGGAGGGTCTCTAAACCTCCTACATGTGACCTAATTGTGCCTTTTTCTCCTCCGCAACCACTCAGGTTTCAGTTTGAACTCTGGTGCGACCCTTCCACTGAAATCCCACTAGACCTGCAGGGATGTGGAAGGATTCAACTCATTAAACCCGGTGGAAATGGCACGGATTGTCTTTGTGGCTCTACCGATCTTGGTGATGATATGCTGTGTTTGCTTCATAATAGAAATGAGTGTGAAGTACTTGAGGACAATGCTTTGCCGGAGCTCCTCTGTGCAAGGGACACCACATATTTGTCAAAAGGTCAGATCATGAGATGTTTCCAGATTTCTGTGAGCAAAGCTTGGGGCCAAATCTCTCATAAGTACGACTTTGAGCTGGCATTTCGAAACCTGGACTTTCCTGGAGCTCTGAAAATCAAATTTCCATCCGGAAAGACAGTCGTCCTTAATCTTACCCCTGCTGTTCAGTTTGAGAACACGGATGCTTACCTCATCTCTCATTTCCCATCTGACACTAGCAAGTCCTCAGACACTCATTGGCAACTCTCGCTAAGCGTTTATGAGAAGAATCTGCTTAAACACCTAGCGAAAAGCCTTCCTACTAATTCCTGTCACATTCATTGCCTTCAAATAGTTGCTTTTTTGCACAAAAAGCAGACCACATTGACAGGGAGAAGTGCCTTTTGTAATTATCATATAAAAACAGCGCTGTTGCATTTGTTGTTGAGTAAACGTCCTGCAATGTGGCAGCCGCAGAATCTCGATAGCCGATTACGAGATCTGCTCAGCTTCCTTCAACAAAGCCTGGAAGAAAAGAAACTCTATCATGCTCTTGTTGGGAACTCTCGCATCCCGGTTGAAATTCTTGTTCCCAAAATAATTCGTACCGCAGAGCCGATAAACTTATATAGGCCTCTTGTGTTACAAAGACACGTTTACGCCAAAATGGAGGAGCATTTTGAGGAGATGGTCAGAAATACCTCAGTGCTTGTTCAGGAATATACGCCTCATTTTTCGAATGGTCACGTGAGGCATGAATTCAGCTCAGCGGAGCAAATTTAGACTCTGGTTTCGAGTGCTGGGAACTTCAACAGCCTCATTACATGAAGTAATGCACCTTCAATGTAAACCACATATTAAGCACTGACTGTTACTGTTGCGATTATGATGTATGGGGTTTCTTCAACTATGGACACTTTTAGATCATAGGTGCaacttaaaactatttttatatataaaggcCACATTAAAATAAGTTGGAAAGTT

Function

symbol description
itprip Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein).

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0005640 nuclear outer membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-422 Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein).

Ensembl:

ensembl_id ENSDARG00000015576

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012799 True 1988 mRNA 0.45 2 25403413 25408387

Neighbor

gene id symbol gene type direction distance location
XLOC_006630 plaua coding downstream 98234 25297257 ~ 25305179 (-)
XLOC_006629 NA coding downstream 118697 25210158 ~ 25284716 (-)
XLOC_006628 adka coding downstream 204153 24918096 ~ 25199260 (-)
XLOC_006627 kat6b coding downstream 497106 24881272 ~ 24906307 (-)
XLOC_006626 kat6b coding downstream 522888 24871050 ~ 24880525 (-)
XLOC_006632 tial1 coding upstream 63618 25472005 ~ 25484752 (-)
XLOC_006633 BX005252.1 coding upstream 122147 25530534 ~ 25530648 (-)
XLOC_006634 mcmbp coding upstream 122617 25531004 ~ 25548882 (-)
XLOC_006635 csgalnact2 coding upstream 161444 25569831 ~ 25581303 (-)
XLOC_006636 ret coding upstream 176169 25584556 ~ 25632756 (-)
XLOC_006471 BX537274.2 misc downstream 15138508 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 24577188 825904 ~ 826225 (-)
XLOC_006619 NA non-coding downstream 780188 24590420 ~ 24623225 (-)
XLOC_006620 AL831745.2 non-coding downstream 796786 24602410 ~ 24606627 (-)
XLOC_006618 AL831745.1 non-coding downstream 815193 24585224 ~ 24588220 (-)
XLOC_006617 NA non-coding downstream 825391 24577265 ~ 24578022 (-)
XLOC_006640 NA non-coding upstream 368002 25776389 ~ 25778815 (-)
XLOC_006643 NA non-coding upstream 438145 25846532 ~ 25853311 (-)
XLOC_006644 NA non-coding upstream 601110 26009497 ~ 26703804 (-)
XLOC_006645 NA non-coding upstream 1124967 26533354 ~ 26544816 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_12128962_12130578 ITPRIP coding CI01000012 null 12128446 ~ 12132127 (+)