eif5a2 (eif5a2,LOC107584931,LOC107722594,LOC107688499,LOC107680233,LOC108442333,LOC103022137,LOC105908511)


Basic Information

Item Value
gene id eif5a2
gene name eif5a2,LOC107584931,LOC107722594,LOC107688499,LOC107680233,LOC108442333,LOC103022137,LOC105908511
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12034994 ~ 12039475 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217077.1
GTTTCTCCTCGTGCATGAGAATCTCGTTGCAGTAAAGGTGCACGCGCATGCGCAGATCTCTCCGTCTTTTGTTGGAAGGGAATGACTGGCGTTTTCAATGTTCTCTGCTCCAGCATCGCAACATTTCTAGACGAATCCTCTGTATACAGTACAGTGGGTGGACGCAGCTCGGGAAAGAGGATTTGTCGTTTGAAGACGGTGTCCTGAAGCGGTCGATTGTGTGATCACGTCGTCTGGAATCCTTTCCACTTCACCCATCATGGCTGATCTTGATACTGACTTCACCAGTGGAGATGCTGGGGCTTCCCTGACCTTCCCCATGCAGTGCAGTGCTCTGCGTAAGAACGGCTTTGTGGTGCTTAAGGGCCGTCCCTGCAAGATTGTGGAGATGTCTACCTCCAAGACTGGCAAGCATGGACATGCCAAGGTGCACTTGGTTGGTATTGACATATTTACtggaaagaaaaatgaagataTCTGTCCTTCCACCCATAACATGGACGTTCCTAACATCAAGAGACTGGACTATCAATTGGTTGGCATTACCGATGGCTACCTTTCCCTGTTGAAGGATAATGGAGACTTGCGTGAGGACCTCAAGCTGCCTGAAGGGGATCTGGGCAAAGAAATAGAGAACAAATTTGAATCTGGGGATGAATTTCTGGTCTCTGTATTGGCTGCCATGGGGGACGAGTGTCCCATTGCCATCAAGCCCATGAGCTCTTAATGAACAGAAGCTGACGGGCAGGTTGAGTGAGGGCCTCTATACCACAAATATTCCATTTTAGTTCTAAAAGTCACCAAAGCCACAGCCTTCACAAACCACCCAGAATTGGTTCTGTTAAAGAGTAAAGATGCTGGACCTTTTGACCCGTCTCATGAGGTGTTGTCTTATCAGGATATTTCCATGATCACAGTGGGTTTCCTGCACGCACGTTCCTTTAGTTCTCTTTATCCATTCCTCCTCCATTATACAGAAGCACTTttatcattcattaaaaatgggAATAGTTTTTTAACGCTCTACTTACCGCggaaacctttttattcatGCCGACTGGCCTTAAACTGTTGCAACTCAGGCAGCAGCCATAGAAGATTACCTCTATGAATGACACTGACTAGTTTGCCGGCGTTTTGGTACATCTACAGCTGTGCCAAAACCTGTGTGTCTCAGGTAGGCTAGGATATGTCTGCGTGTCGCTCTGACGGTTTTCCACTTGTTGGGGTGACCGGAAACTAGCGATCCTAAGACAGACTCAACATTTACTGACATTAAATTCAGACCAAATATAATGTAACTTATCCTGAGTAACAgaaccagtttttttttggtttttttgtctACAAAGTTTAACTCCAcctgacattttaattttaagtttacagCATTTGTCTTTGCGTTAACAGATCTTTTGGTAGCAACAGAGCAATAACCCAACTTTGTTTGTTCGTAAGGGAAGATGATTATAAGAAGGGCCTTTGAGCTTCGCGTTGGCTACGGATGCCCTCGGCAACAAACTCGGTTTACAGTAGCTTTGTTATACAACAAATTTTTATGCTGCAAAaattagcttattttttttgtacttgtgGACAGGCACAGTATGTGCTCAAGGGCTTCAATATCAACCCTTTTTTTTAgtattcacattttattgcatCTTACATGCATCTGATTTGTTTACTGGTATAAAggctttattttagttattttttttttttatttttttccccctccaccTTCAGGGCACAGTTTGCATTTGGCTCATAACAAATATAGTATTTTCGTATTAGTAGGCATTCATTTACTATGAAATTCCTTTCTCGAAGTAGAAATGAGGACTTGCTATTATCTTTGCGTTTGATTTTTCCACTAGGTGTTAGTTTTGATTCTTAATTTTCCAGTcagtagtttttgtttactgtaagATGAATGCTCTTGGTTATGCAGAACGTTTTTCCAAGTCAGACTTTCAGCAGCGTTGGCTGGCATCTTACCGTGTTCCCTGTTTCAACTAGTTTTTGTTCTTGTAAATCTAGCTCTCATTTAAACGTAGCCGTAGAACTGAGAGCTCAAGTGGAAAGTATTGTATGACTGTACAGTATTGAGAAACTTTCACATTGGCATATCAAACTCAGTGAGTCTCTCAGGATTCAAGTGTTTCAGTTATTTTGCTGATTGTAGTATTAGTCCTAAATATCACTGTTAaatacctctctctctctatctgcaACACATAGTATTCATGCCAACAAGTGAATAGCTCACTTTATTTACTGGATGcatatttggttaatttcttgaATTTATCAGCTTGACTATCAGCGACGGGCAGAAAGAAACTTCTTGTAACAAAACTTGTAAGAAGGTGCTTAATCAGGCAAGCGGAAGACGTGATgatgttcagtgtttttcataTAGCTAGTTGAATGAAAATTGTAAGAAGCCACAGATTGGGATAAGAGGGGGAGCAATTATAATAAACTCAACTGAAAAAATGA
>XM_043217084.1
CATGTGTGTCAAGCTGATGCGAAGCTAGACAGAGCAGCATAACGGCCTGACAAAAGTTCTTGATTCGGATGCGAGCCTTGGTGTTTACTACGTTACGAGCGACGTGTCGTAGTTTGTGTTTGTTCGCGAGCAAAATCGCGGTTTGTGCAGTTTAAGAGATCGTAAACGGTTTTTAAGTGTTTCGGTCAATTCAGTAGTTCCGGTTAACTTCGCGTGCGGCTGTAAAGTGAGTCATTCATCCAGCCCAGCGCCCATACTGCCCCGGTTGCGTTAGATTTCGCAAAATTATTACGTTTTGCCTCAAACGCTTGTTTTTTGGGGTCGCCAGGCCGTGGTAGTTAGTTAATGAGTCCTAGATTTCGCAGTTACGACGTTGGCATTGAGATCGTGTGGTTAAAGTTAACGTTACGTTCCAGCGCGACGGTCCGCTCCATTAGCGCACACGAGGCCGAAAGTTGTAATCCTTTCCACTTCACCCATCATGGCTGATCTTGATACTGACTTCACCAGTGGAGATGCTGGGGCTTCCCTGACCTTCCCCATGCAGTGCAGTGCTCTGCGTAAGAACGGCTTTGTGGTGCTTAAGGGCCGTCCCTGCAAGATTGTGGAGATGTCTACCTCCAAGACTGGCAAGCATGGACATGCCAAGGTGCACTTGGTTGGTATTGACATATTTACtggaaagaaaaatgaagataTCTGTCCTTCCACCCATAACATGGACGTTCCTAACATCAAGAGACTGGACTATCAATTGGTTGGCATTACCGATGGCTACCTTTCCCTGTTGAAGGATAATGGAGACTTGCGTGAGGACCTCAAGCTGCCTGAAGGGGATCTGGGCAAAGAAATAGAGAACAAATTTGAATCTGGGGATGAATTTCTGGTCTCTGTATTGGCTGCCATGGGGGACGAGTGTCCCATTGCCATCAAGCCCATGAGCTCTTAATGAACAGAAGCTGACGGGCAGGTTGAGTGAGGGCCTCTATACCACAAATATTCCATTTTAGTTCTAAAAGTCACCAAAGCCACAGCCTTCACAAACCACCCAGAATTGGTTCTGTTAAAGAGTAAAGATGCTGGACCTTTTGACCCGTCTCATGAGGTGTTGTCTTATCAGGATATTTCCATGATCACAGTGGGTTTCCTGCACGCACGTTCCTTTAGTTCTCTTTATCCATTCCTCCTCCATTATACAGAAGCACTTttatcattcattaaaaatgggAATAGTTTTTTAACGCTCTACTTACCGCggaaacctttttattcatGCCGACTGGCCTTAAACTGTTGCAACTCAGGCAGCAGCCATAGAAGATTACCTCTATGAATGACACTGACTAGTTTGCCGGCGTTTTGGTACATCTACAGCTGTGCCAAAACCTGTGTGTCTCAGGTAGGCTAGGATATGTCTGCGTGTCGCTCTGACGGTTTTCCACTTGTTGGGGTGACCGGAAACTAGCGATCCTAAGACAGACTCAACATTTACTGACATTAAATTCAGACCAAATATAATGTAACTTATCCTGAGTAACAgaaccagtttttttttggtttttttgtctACAAAGTTTAACTCCAcctgacattttaattttaagtttacagCATTTGTCTTTGCGTTAACAGATCTTTTGGTAGCAACAGAGCAATAACCCAACTTTGTTTGTTCGTAAGGGAAGATGATTATAAGAAGGGCCTTTGAGCTTCGCGTTGGCTACGGATGCCCTCGGCAACAAACTCGGTTTACAGTAGCTTTGTTATACAACAAATTTTTATGCTGCAAAaattagcttattttttttgtacttgtgGACAGGCACAGTATGTGCTCAAGGGCTTCAATATCAACCCTTTTTTTTAgtattcacattttattgcatCTTACATGCATCTGATTTGTTTACTGGTATAAAggctttattttagttattttttttttttatttttttccccctccaccTTCAGGGCACAGTTTGCATTTGGCTCATAACAAATATAGTATTTTCGTATTAGTAGGCATTCATTTACTATGAAATTCCTTTCTCGAAGTAGAAATGAGGACTTGCTATTATCTTTGCGTTTGATTTTTCCACTAGGTGTTAGTTTTGATTCTTAATTTTCCAGTcagtagtttttgtttactgtaagATGAATGCTCTTGGTTATGCAGAACGTTTTTCCAAGTCAGACTTTCAGCAGCGTTGGCTGGCATCTTACCGTGTTCCCTGTTTCAACTAGTTTTTGTTCTTGTAAATCTAGCTCTCATTTAAACGTAGCCGTAGAACTGAGAGCTCAAGTGGAAAGTATTGTATGACTGTACAGTATTGAGAAACTTTCACATTGGCATATCAAACTCAGTGAGTCTCTCAGGATTCAAGTGTTTCAGTTATTTTGCTGATTGTAGTATTAGTCCTAAATATCACTGTTAaatacctctctctctctatctgcaACACATAGTATTCATGCCAACAAGTGAATAGCTCACTTTATTTACTGGATGcatatttggttaatttcttgaATTTATCAGCTTGACTATCAGCGACGGGCAGAAAGAAACTTCTTGTAACAAAACTTGTAAGAAGGTGCTTAATCAGGCAAGCGGAAGACGTGATgatgttcagtgtttttcataTAGCTAGTTGAATGAAAATTGTAAGAAGCCACAGATTGGGATAAGAGGGGGAGCAATTATAATAAACTCAACTGAAAAAATGA

Function

symbol description
eif5a2 Predicted to enable translation elongation factor activity. Predicted to be involved in positive regulation of translational elongation. Predicted to act upstream of or within several processes, including mRNA transport; positive regulation of translational termination; and translational elongation. Predicted to be located in endoplasmic reticulum membrane and nucleus. Predicted to be part of nuclear pore. Orthologous to human EIF5A2 (eukaryotic translation initiation factor 5A2).

NR:

description
PREDICTED: eukaryotic translation initiation factor 5A-1-like

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0006452 translational frameshifting biological_process
GO:0045901 positive regulation of translational elongation biological_process
GO:0045905 positive regulation of translational termination biological_process
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine biological_process
GO:0043022 ribosome binding molecular_function
GO:0003743 translation initiation factor activity molecular_function
GO:0003746 translation elongation factor activity molecular_function

KEGG:

id description
K03263 EIF5A; translation initiation factor 5A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217077.1 False 2505 mRNA 0.41 5 12034994 12039475
XM_043217084.1 True 2727 mRNA 0.42 5 12035252 12039475

Neighbor

gene id symbol gene type direction distance location
slc2a2 slc2a2,LOC107550598,LOC107680265,LOC107722632,LOC107586013 coding upstream 1912 12025276 ~ 12033082 (+)
tnika tnika,LOC107688496,LOC107722539,LOC107680235 coding upstream 10096 11946162 ~ 12024898 (+)
fndc3ba fndc3ba,LOC107688494,LOC107584937,LOC107722494,LOC107732513,LOC107680249,LOC107550601 coding upstream 135616 11787692 ~ 11899378 (+)
ppp2r3a ppp2r3a,LOC107722551,LOC107550604,LOC107732512,LOC107680219,LOC107584952 coding upstream 252587 11710184 ~ 11782407 (+)
msl2a LOC107722612,LOC107688489,LOC107584967,LOC107709889,LOC107680240,LOC107550607,LOC107709890 coding upstream 344071 11685777 ~ 11690923 (+)
slc7a14a LOC107584921,LOC107688500,LOC107722625,LOC107680258,LOC107550597,LOC107732514,LOC108442332 coding downstream 28786 12068261 ~ 12089926 (+)
grin3ba LOC107722525,LOC107586537,LOC107688545,LOC107674402,LOC107602513,LOC107732504 coding downstream 72481 12111956 ~ 12150169 (+)
plppr3a plppr3a,LOC107584910,LOC107729344,LOC107688501,LOC107732518,LOC107674011,LOC107602549 coding downstream 116619 12156094 ~ 12168917 (+)
palm1b LOC107729325,LOC107688502,LOC107584893,LOC107674018,LOC107732516 coding downstream 136753 12176228 ~ 12189936 (+)
ptbp1a ptbp1a,LOC107602545,LOC107732511,LOC107674042,LOC107584874 coding downstream 151754 12191229 ~ 12201145 (+)
G11207 LOC107688485,LOC107585026,LOC107550612,LOC107709892,LOC107722651 non-coding upstream 416131 11614241 ~ 11618863 (+)
LOC122328936 NA non-coding upstream 421428 11609251 ~ 11613566 (+)
G11191 NA non-coding upstream 578130 11456326 ~ 11456864 (+)
G11190 NA non-coding upstream 579586 11454258 ~ 11455408 (+)
G11189 NA non-coding upstream 580883 11453571 ~ 11454111 (+)
G11419 NA non-coding downstream 61400 12100875 ~ 12101126 (+)
G11505 NA non-coding downstream 298192 12337667 ~ 12339049 (+)
G11590 NA non-coding downstream 505878 12545353 ~ 12545592 (+)
G11593 NA non-coding downstream 574900 12614375 ~ 12614596 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding downstream 576520 12615995 ~ 12621414 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 97404 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 527290 11482104 ~ 11507704 (+)
rps28 NA other upstream 590423 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 693883 11339735 ~ 11341111 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other upstream 696525 11303678 ~ 11338469 (+)
LOC122358236 NA other downstream 584348 12623823 ~ 12626387 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 828454 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 2135889 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 2706632 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2736847 14776322 ~ 14782977 (+)

Expression


Co-expression Network