LOC122323627


Basic Information

Item Value
gene id LOC122323627
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22592599 ~ 22601454 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217616.1
CCACATTCCTGCACACAGTTATATTttagagaaggaaaaaaaacggGACTTTTGTTTGCGAAAATGCACGTCGCTCTGACGTCATCACGCCGCGCCGCCCGCTGTTGTACACACGTGAGCGGAATCACACTGGCATGAAAGCAGTTCAACGTCTCTGTCAGATCTGAGAGACCCCGACAGGCCGAAGGGATGGGCGAGGAGatggaggtcaaaggtcagcagtGTGTTAAGGGTAGGCCGAAGAAGGGGAAGAAGCGGCCCGCGCCGGACGGGACCAAGAGGCCGAGACTGGACGGGCCGAGCGTGAGCTACTTCCGGCGCGTCGGAGACAGACTCAAGGAGGGCTTCACGGACGAGGAGGAGAGAgTCCTGTTTGTGGAGAACGTGCTGTccgaggtcaaaggtcaagcgGCGCTCGTCTCCATGGATATGACGGGCAGTTTGGCTCTGCAGCAGCTGCTCTCATTGGCCGCCGCTCAGGTGGCAGGGTTGCTGGCCGAGCTGGGAGGAGAGACGGGGTCAGAGTTCAGAAGCGTGTCATGTGACCCGTGCGGGGGTCATGTGATGGAGACTGCGCTCAGACAGGCCCGCCGCTGGGAAGAGGAGAGCTCcgtggaggaagaggaggaggaggaggagcgctGTGGGCTGCTGGAGGCTCAGGTGAAGCGTCTGTGTGCAGCGGTCAGAGAGAGTCCGCTGGACTTCCTGAAGGATGTGTACGGGTCACATGTTCTCCGGACGCTGGTCCAGGTTCTGAGCGGATGTCTGACCCGAGACGCATCGCCTCAGACGGGTAAGAAGCAGAAGACGACCAAAGAAGAGCTGCTGGATTTTGAGATCCCCGTCTCCTTCTGGTGGGAGCTGAAGCATCTCAGCGAGTGTCTGCTGGAGAACATTAAAGTGTGTGTGACAGACACCAGCTCCAGTGCCGCTCTCCAGACGCTGCTGACCATCTCTCACAGGAAGAGACCCATTCTGTGCAGGAAGCTGATCAAGGGCATCATGGGATACCTGACAGGGCTGAGCTCGGCTCCCGGAGTCagTCCTCTGCTGGTGTTCCTGAAGGATCCTTCCAGCAGTCACCTGATGCAGGTCATCTTCAGCTGCTCCAACGAGGCCGTGCTGCGAGACGTCTACAGGACACACCTGAGGACACAGATGATGACTCTGGCTCTTCATCCCATCGCAAACTTCCCCGTCCAGAGCCTGATCACCGCCTCGGCGCGCTACAGAGTGTTCCTGAAGATCCTCGACGAGCTGATGCAGGGCTTCGAGGCGATTCTGGCGGCGGGACACATGGGTGTGGTGGTGCTGATGCTGGAGAGCTGTGTTCATTGGGAGGAGAAGCAGAACGAGATGATGCAGCGCCTCCTGCAGGCCTTTCACTGCAGCGAGCCGGCTCTGCAGCTCTCCTGTCTGCCTCTCTTCTTATCTTTAGTGGCCTATGAAGTGTACTACAACAAAGAGACAGCAGAGGGAGACTCCGTCACACAGCCGGTGCAGCCGCGTCTCTCCGTGTGTTATCACGGCTCTCGTCTGGTCCAAGCCCTCGCCGGATTCAGAGACCGCTCCGTCCTGATGAACAGCCTTCACGCGCTGGGCTCCGCTGACCTCCTGACCCTCGGCACCGACCGCTGCGGCAGCCACGCGCTCCAGAAGCTGCTGACCTCCGCCAGCGATAAGGGCCGAGGAAAGATGCTGAGAAAGCTGGAGGAGCTTTACGTCCCGTTGGCCTGTTCGTCCTGCGGCAGCCGTCTGCTGGAAGCCGTGTGGAACAGCGCCACCGTCGGCCAGAGGCAAAGCATCGCTGAGAAACTGGTCCCCAGTGAGATACAGCTCCGGTCCGATCAGTTCGCGCGGCACACTTGGACCAAGTTCGGTCTGACGATCTTCGTGAAGCGGCGGGGCGACTGGCTGGAGGCTCAAGTGGGAGAATCGAAGAAGAGGGCGATGTTCAGTGAGATTCTACAGTAAGAGACTGTAAACAAAGTGTAACCGCTTTTTACGCGttaccttttcattttataaataaaaacatcaaaaagcctgca

Function

GO: NA

KEGG:

id description
K14790 NOP9; nucleolar protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217616.1 True 2054 mRNA 0.58 13 22592599 22601454

Neighbor

gene id symbol gene type direction distance location
LOC122357060 NA coding upstream 20599 22562512 ~ 22572000 (+)
epb41l3b epb41l3b,epb41l3,LOC107689342,LOC107729731,LOC107750217,LOC108427206 coding upstream 42732 22515405 ~ 22549867 (+)
LOC122324242 ephb1,LOC107549839,LOC107671589,LOC108430182,LOC106599529,LOC103359190 coding upstream 266427 22134354 ~ 22326172 (+)
gpc1b gpc1b,LOC107660106,LOC107749182,LOC107730456,LOC107549820,LOC107600088,LOC107671591 coding upstream 487498 22044868 ~ 22105101 (+)
gpc5c gpc5c,LOC107749179,LOC107660087,LOC107671592,LOC107730460 coding upstream 566512 21929297 ~ 22026087 (+)
foxl2b LOC107574316,LOC107730743,LOC107683772,LOC107750224,LOC107549802,LOC107684570 coding downstream 37432 22638886 ~ 22640594 (+)
pnp5b pnp5b,LOC107730396,LOC107574318,LOC107750205,LOC107549813,LOC107684565 coding downstream 57610 22659064 ~ 22665912 (+)
ncstn ncstn,LOC107552665,LOC107671788,LOC107696591,LOC107726318 coding downstream 70647 22672101 ~ 22688316 (+)
nectin4b LOC107726329,LOC107696495,LOC107671794 coding downstream 94627 22696081 ~ 22717815 (+)
si:dkeyp-68b7.12 LOC107696752,LOC107552668 coding downstream 129220 22730674 ~ 22751530 (+)
G14541 NA non-coding upstream 6349 22522411 ~ 22586250 (+)
G14542 NA non-coding upstream 14376 22577023 ~ 22578223 (+)
G14540 NA non-coding upstream 78662 22512171 ~ 22513937 (+)
G14535 NA non-coding upstream 116397 22475781 ~ 22476202 (+)
G14532 NA non-coding upstream 119996 22467860 ~ 22472603 (+)
G14549 NA non-coding downstream 42341 22643795 ~ 22650843 (+)
G14578 NA non-coding downstream 140973 22742427 ~ 22786013 (+)
G14553 NA non-coding downstream 174786 22776240 ~ 22777003 (+)
LOC122357472 NA non-coding downstream 185267 22786721 ~ 22802473 (+)
LOC122328317 NA non-coding downstream 211812 22813266 ~ 22829545 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 106944 22461916 ~ 22485655 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other upstream 725200 21857212 ~ 21867399 (+)
G14471 NA other upstream 731157 21860891 ~ 21861442 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other upstream 739592 21843575 ~ 21853007 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other upstream 876309 21714683 ~ 21716290 (+)
LOC122327931 NA other downstream 32075 22633529 ~ 22674275 (+)
fcer1gl LOC107671799 other downstream 89745 22691199 ~ 22695330 (+)
LOC122324535 NA other downstream 401711 23003165 ~ 23005254 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 943652 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 1334467 23935921 ~ 23939016 (+)

Expression


Co-expression Network