mrps14 (LOC107722064,LOC107563590,LOC107658361,LOC107678929,LOC107559053,LOC107726917)


Basic Information

Item Value
gene id mrps14
gene name LOC107722064,LOC107563590,LOC107658361,LOC107678929,LOC107559053,LOC107726917
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 16495941 ~ 16497221 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217636.1
ACTAAACTCAATTCGTACCCTTCAAACCACCATCGAGGTTAGCGTTGGATCAACATGGCGGCGTTGAAGCTCCTCAGCACGGGGATGGGGTTTCTGCAGTCGTCCTTGCCGCTTTGTAGACAGGCCTACAGAAGTTCAGTTGGAGTGGTGGAGCAGGTCCGGAACTACTATGTTGACTGGAGGATGTTACGGGATGTGAAAAGGAGACAGTTGGCTTTTGAATATGCAGATACAAGACTGCGCATCAATGCCATTAGGAAGAATACTATTTTGCCAAAAGAGTTGCAGGAGATAGCTGATAAAGAAATAGCCGCACTTCCTCGAGACAGTTGTCCTGTGCGCATTCGCAACAGGTGTGTGATGACATCACGTCCACGTGGATTAAAGCGCAGGTGGCGTCTCAGTCGCATTGTTTTTCGCCATTTAGCAGACCACAACCAGATGTCAGGAATACAGAGATCCATGTGGTGATCAGCCACCATCATGGGATTCTTCTAAAACCTTGTCATAAACGAGAAGATATTCTTGCATAGAATGCAAAGAGACAGAACCTGAAAACCAACAAGCTCACtgtttgttgtaatttttgtttCCTACTGAATTGATTCAGATTTtagcattgtcttttttttttttgtctataacTGAAGTTATTTTGTTGTACATACAATAAAAAGGTGGTATGTGCTACTTTcgtgtttttggggttttttttactctgaaatattttattttgactaatttgactaattattaaaataaatacataaagaggATGAGGACGTCTACAGTACATGTTTTATCATCAACACAAATTTGAACATTGAAACTT

Function

NR:

description
28S ribosomal protein S14, mitochondrial

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02954 RP-S14, MRPS14, rpsN; small subunit ribosomal protein S14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217636.1 True 832 mRNA 0.41 3 16495941 16497221

Neighbor

gene id symbol gene type direction distance location
tnr tnr,LOC107658355,LOC107726886,LOC107558359 coding upstream 52580 16325150 ~ 16443361 (+)
cop1 rfwd2,LOC107726924,LOC107678936,LOC107722073,LOC107658354 coding upstream 210383 16275070 ~ 16285558 (+)
astn1 astn1 coding upstream 271470 16031983 ~ 16224471 (+)
klhl20 klhl20,LOC106569069 coding upstream 639186 15849084 ~ 15856755 (+)
kif2c kif2c,LOC107599896,LOC107657458,LOC107720856,LOC107700992,LOC107558283 coding upstream 734187 15754575 ~ 15761754 (+)
LOC122355504 cacybp,LOC107722060,LOC107658360,LOC107678928,LOC107726916,LOC107559063,LOC107563589 coding downstream 488 16497709 ~ 16499702 (+)
plk3 plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922,LOC107678927,LOC107557223 coding downstream 3831 16501052 ~ 16507898 (+)
ankrd45 ankrd45,LOC107563586,LOC107658305,LOC107722043 coding downstream 48115 16545336 ~ 16547012 (+)
rasal2 rasal2,LOC107678931 coding downstream 64163 16561384 ~ 16612466 (+)
dhx9 dhx9 coding downstream 116555 16613776 ~ 16623033 (+)
G12530 pappa2,LOC107568983,LOC107722077,LOC107558342,LOC107658303,LOC107678935,LOC107726923 non-coding upstream 231021 16263774 ~ 16264920 (+)
LOC122359940 LOC107743936,LOC101883431 non-coding upstream 461033 16032757 ~ 16034908 (+)
G12491 NA non-coding upstream 617537 15878134 ~ 15878404 (+)
G12451 NA non-coding upstream 684548 15810893 ~ 15811393 (+)
LOC122356092 NA non-coding upstream 753143 15731819 ~ 15742798 (+)
G12607 NA non-coding downstream 193705 16690926 ~ 16693619 (+)
G12669 NA non-coding downstream 286679 16783900 ~ 16784544 (+)
G12729 LOC107678904 non-coding downstream 329809 16827030 ~ 16829326 (+)
LOC122356672 NA non-coding downstream 332887 16830108 ~ 16839463 (+)
G12730 NA non-coding downstream 333428 16830649 ~ 16831883 (+)
LOC122323293 NA other upstream 39409 16450132 ~ 16456532 (+)
G12531 LOC107722077,LOC107568983 other upstream 227144 16267043 ~ 16268797 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other upstream 620177 15860179 ~ 15875764 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other upstream 1246692 15241797 ~ 15249249 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other upstream 1712964 14776322 ~ 14782977 (+)
LOC122361622 NA other downstream 227393 16724614 ~ 16776351 (+)
golim4b golim4b,LOC107591324,LOC107684437,LOC107706331,LOC107559125,LOC107659375,LOC107738257 other downstream 534918 17032139 ~ 17039903 (+)
sppl2 sppl2,LOC107738168,LOC107706381,LOC107591351,LOC107659410,LOC107668984 other downstream 865024 17362245 ~ 17369102 (+)
G13114 tep1,LOC107591368,LOC107706362,LOC107659385,LOC107738210,LOC107591364,LOC107738151 other downstream 1069620 17566841 ~ 17567916 (+)
G13111 LOC107738210,LOC107591364 other downstream 1110031 17607252 ~ 17608092 (+)

Expression


Co-expression Network