LOC122323657


Basic Information

Item Value
gene id LOC122323657
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23929631 ~ 23931889 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217662.1
GTATCACAACGGCAGGTCAGACTCCTCCGTCTGCTGCAATGGAATTTGGTCACTTTCTCGTGTTCTTCATGACAGCTTTGATCTCCAGCACAGTATCCGCATCTGAAGACCATGTGTTCGTACAGACCGGGGGCTCGGTTAAACtagtcataaaaaataaaataccaccACACTTTACTAGATTCACATGGATTAAtgataaatctgaaaatgtagtCAGAAATCAATCAGGAGAATTCAAACCTCACAGTTCATATAAGGACAGAATGGATTTCAATGCTAAAACCTACTCTCTAACACTGAGAAACATGCAGAAGACAGACAGTGGACTCTACAGAGCAATCACAAGAGACAAACAAGAACTGTGTCATGCTGAATACAACATATCAGTTATAGATCCAGTGGATTCTCCTGTTCTGAAAGGAAACTTCACCATGATAAGTGTTAACGTCTGTGTGGTGAACGTCTCATGCAGTGGACCTGATCAAACAATCAGCCACAGTTACCACAGCAACGACTGCACTCaagaggaagtgacatcatctGGAGTCCAGACTCTAGCCCTGTATTGTAGAAAGAACAGAGTTGTCTGTAACTACAGCAATCCAGTCAGCTGGAAGAATCAAACTATAGAGATTAACCAACTTTGTACACCTTATGAAAAAGAACATCCAGAAGAAAACAACAGctcttttcctctcttcctTTGGCTCTCGGTCATCGCTGGTGTATTTGTGCTGGTTTTCACAGCAGTTTCTGTATTCTGCTGCTCTTACAAGAAGCGTAAAAGGGTATATCTATCataatgaaatagaaatgtaacctcagtattttttttgttttttctgcaaGTCACTTTCTAAATCTTTTCTATGAAATCTCTAGGTGCTGAACAGAAGGGTCATAAAGGCTGTGGAGAAGTTGGTCTAATAGATAGATCTTCTTCCTCTGAAACAGATCATACAATTTATTCAATAGTGTATTATTCAACAGTGATGGAAGACAACCTGTGCATAAACAGCAAATGataaatttatgaaaaaatgtgcGTTTGTCAATAGATatctttacatatatattaacatattatgcCAATGAAGTATTAAGCAAGCTAATTTAAGACATTCATTAGTAATGAGTGATAATATGTGTGataattgttttgctttttattaccattaaactgtttgttcatttaattaactgtattccctgactttcattgtattttgTGTTAGTCAAAGTCAAAGGGgagcagtttttttaatattggtgCTGGTGTTCAGCAGTAAAGTGACACATACTGCAGAGAAGGAATATAAGGTGCTTTTACTGGAGTTTGAACTGACTCCATGCCTCTCATGTATCTATCCCAGACCAAGCTGAGCTAAAAATCTTTCAT

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217662.1 True 1402 mRNA 0.37 4 23929631 23931889

Neighbor

gene id symbol gene type direction distance location
LOC122323665 NA coding upstream 4000 23920231 ~ 23925631 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding upstream 143376 23783724 ~ 23786255 (+)
lpar5a LOC107737401,LOC107698486,LOC107572991,LOC107679392,LOC107728381,LOC107569267 coding upstream 154448 23772880 ~ 23775183 (+)
LOC122356725 LOC107698487,LOC107737400,LOC107679394,LOC107572992,LOC107728385,LOC107569271,LOC793909 coding upstream 159139 23765958 ~ 23770492 (+)
trnaw-cca_1 NA coding upstream 192509 23737051 ~ 23737122 (+)
LOC122328481 LOC107599284 coding downstream 63294 23995183 ~ 23997150 (+)
LOC122324443 NA coding downstream 97115 24029004 ~ 24032203 (+)
LOC122327432 LOC107549368 coding downstream 139320 24071209 ~ 24073204 (+)
LOC122324938 NA coding downstream 147267 24079156 ~ 24081504 (+)
LOC122326195 NA coding downstream 177774 24109663 ~ 24111683 (+)
G14989 NA non-coding upstream 2018 23927294 ~ 23927613 (+)
G14988 NA non-coding upstream 2381 23927040 ~ 23927250 (+)
G14979 NA non-coding upstream 45215 23883762 ~ 23884416 (+)
G14978 NA non-coding upstream 50027 23879178 ~ 23879604 (+)
G14896 per2,LOC107572994,LOC107698490 non-coding upstream 125002 23803784 ~ 23804629 (+)
LOC122328475 NA non-coding downstream 53869 23985758 ~ 23986203 (+)
LOC122328496 NA non-coding downstream 61586 23993475 ~ 23994511 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding downstream 62621 23994510 ~ 23995121 (+)
G14996 NA non-coding downstream 77636 24009525 ~ 24023608 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 209351 24141240 ~ 24141921 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 381657 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 924377 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 1234301 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 1255356 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 1443976 22461916 ~ 22485655 (+)
LOC122323670 NA other downstream 4032 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 113796 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 127523 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 151949 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 309983 24241872 ~ 24249991 (+)

Expression


Co-expression Network