impa1 (impa1,impa1.3,LOC107688552,LOC107586492,LOC107602533,LOC107729422,LOC107714831,LOC107674158)


Basic Information

Item Value
gene id impa1
gene name impa1,impa1.3,LOC107688552,LOC107586492,LOC107602533,LOC107729422,LOC107714831,LOC107674158
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12376957 ~ 12380610 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043217968.1
ACTGAAGTACATACTACGCATgcgcaacataaaaaaatcaaaacaaaaaaatcgcCTGTAGTTCCTAAACGGAACATTGAATTGTAAAGTATTTATTACTCATTTAAATAGGGGCAGTGGgatatttcattgttttctgaaaataacCAGACGTTTTAGGGTTAATCTCGTTTGGTCCTCCAAGAACCCGGAAACAACAATCTGACCGCTCGTCTTCATTTCGCCGGTCATTGAAAGAGGGTCCTTGCACAACGGCACGATGCCTGACCTTTGGCTGGATGCCATGGACCATGCTGTGACACTGGCCAGGAAAGCAGGAGAGATGGTAAGGGATGCTTTGCAGAATGACCTGAAGATCATGTGCAAAAGCTCTTCTGTCGACCTGGTCACTAAAACAGACCAGAATGTGGAGCAACTTATTATTACGTCAGTGAAGGAGAAGTTTCCTGAACACAGtttcattgggGAGGAGTCAGTGGCTGCAGGAGAACCTAGTGTTTTGACTGAAAAACCAACATGGATTGTTGACCCTGTGGATGGGACCACAAACTTTGTGCATGGATATCCATTTGTTGCTATATCCATTGGCTTCGCTGTCAACAAAACATTAGAGTTTGGGGTGGTTTATAGCTGCATAGAAGACAAGATGTACACGGCTCGAAAAGGGAAAGGTGCATTTTGCAACGGAGAGCCGCTGCAAGTGTCGGACCAAAAAGAGATTAACCAGTCAATCATCGCTACGGAGTTTGGCTCTAACAGAGACCCTGATGCCGTCGATAAGATTTTCTCTAGCATGAGGAAAATCCTATGCCTGCCAGTTCATGGGATACGTGGCGCTGGATCTGCTGCCATCAACATGTGCTTGGTAGCATCTGGTTGTGTCGAGGCCTATTATGAGATTGGGATCCACTGTTGGGATGTGGCGGCTGGGGCAGTCATAGTCTCAGAGGCAGGCGGAGTTCTCATGGATGTTGAAGGTGGCCCGATGGATCTGATGTCTAGAAGAGTCTTGGCAGCAAATAACAGCATAATTGGAGAAAGAATCGTTAAAGAGATTGAGGCTTTTTCAGCTGTTAGAGATGATGCACCTGTAAACCCTATCAAATAAACCCCTGTGCTATTAAAATCTGCTACATtagaaataatatatgaatattgaaTTTTCAGGTTATGTATGATATCTGTCTCATATATTATACCCATGTTTAAAGCTATGTGCAAATGGTAAATCAAGAAAAAGCATTGAGCTACTGAAAGGCAATGTTCATGgtcataaatgtgtttaaagcGTTTTACTagtaatattgtttgttttatacacAAGTTCAATAAACAAAGAGCTAATAATGAA

Function

symbol description
impa1 Predicted to enable inositol monophosphate 1-phosphatase activity. Predicted to be involved in inositol metabolic process; inositol phosphate dephosphorylation; and signal transduction. Predicted to act upstream of or within phosphatidylinositol phosphate biosynthetic process. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability and intellectual disability. Orthologous to human IMPA1 (inositol monophosphatase 1).

NR:

description
inositol monophosphatase 1-like

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process

KEGG:

id description
K01092 E3.1.3.25, IMPA, suhB; myo-inositol-1(or 4)-monophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043217968.1 True 1351 mRNA 0.42 9 12376957 12380610

Neighbor

gene id symbol gene type direction distance location
asph asph,LOC107729161,LOC107584723,LOC107688512,LOC107714857,LOC107602531 coding upstream 221 12361720 ~ 12376736 (+)
LOC122360148 LOC108278063 coding upstream 5505 12369749 ~ 12371452 (+)
ttpa ttpa,LOC107688513,LOC107729218,LOC107584770,LOC107674130,LOC107602535 coding upstream 17895 12355888 ~ 12359062 (+)
lrrc42 LOC107729432,LOC107586495,LOC107602539,LOC107688527,LOC107682545 coding upstream 40031 12333787 ~ 12336926 (+)
LOC122328950 NA coding upstream 95453 12281372 ~ 12281504 (+)
cdh7a cdh7,LOC107584702,LOC107602530,LOC108432272 coding downstream 107603 12488213 ~ 12541573 (+)
tesk2 tesk2,LOC107728975,LOC107679327,LOC107602527,LOC107714850,LOC107674209,LOC107585988 coding downstream 249421 12630031 ~ 12650410 (+)
si:ch73-382f3.1 si:ch73-382f3.1,LOC107586484,LOC107729092,LOC107602516,LOC107674450,LOC107714852,LOC107679322 coding downstream 273268 12653878 ~ 12656884 (+)
selenop2 LOC107679336,LOC107729074,LOC107674235 coding downstream 277436 12658046 ~ 12660442 (+)
elovl8a elovl8a,LOC107679337,LOC107602526,LOC107714853 coding downstream 280305 12660915 ~ 12664376 (+)
G11505 NA non-coding upstream 37908 12337667 ~ 12339049 (+)
G11419 NA non-coding upstream 275831 12100875 ~ 12101126 (+)
G11207 LOC107688485,LOC107585026,LOC107550612,LOC107709892,LOC107722651 non-coding upstream 758094 11614241 ~ 11618863 (+)
LOC122328936 NA non-coding upstream 763391 11609251 ~ 11613566 (+)
G11191 NA non-coding upstream 920093 11456326 ~ 11456864 (+)
G11590 NA non-coding downstream 164743 12545353 ~ 12545592 (+)
G11593 NA non-coding downstream 233765 12614375 ~ 12614596 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding downstream 235385 12615995 ~ 12621414 (+)
G11618 NA non-coding downstream 316476 12697086 ~ 12697294 (+)
G11622 NA non-coding downstream 365202 12745812 ~ 12759891 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 439367 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 869253 11482104 ~ 11507704 (+)
rps28 NA other upstream 932386 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 1035846 11339735 ~ 11341111 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other upstream 1038488 11303678 ~ 11338469 (+)
LOC122358236 NA other downstream 243213 12623823 ~ 12626387 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 487319 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 1794754 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 2365497 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2395712 14776322 ~ 14782977 (+)

Expression


Co-expression Network