G473


Basic Information

Item Value
gene id G473
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1222293 ~ 1222517 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU570
CCACGCTTTCTACGTCAGAATACCAGCTCAGTATTGGCAGACACTGTTCACGTGAGCAGCACAACGCATGCGTTTGATGCTAACGCAGGAGCCGCCCAATAATGAGTCGGCGTTCACGCGTAAACACGGAAGCACTGAACTGCATTCACTGCGTCAACTGCATACGAGGCTGACAGGGGAGAGACTTTGTTGAATAAAGTCATTATTTTTGTTTTGTTTTTGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU570 True 225 lncRNA 0.34 1 1222293 1222517

Neighbor

gene id symbol gene type direction distance location
CI01000000_01196208_01208022 CLK4, CLK4A coding upstream 13936 1196208 ~ 1208357 (+)
CI01000000_01176488_01180221 4EB3L, 4EBP, EIF4EBP3, EIF4EBP3L coding upstream 42024 1176450 ~ 1180269 (+)
CI01000000_01149697_01163047 RUFY1 coding upstream 58313 1149697 ~ 1163980 (+)
CI01000000_01105760_01112812 NA coding upstream 108341 1105760 ~ 1113952 (+)
CI01000000_01100131_01102607 NA coding upstream 119569 1100131 ~ 1102724 (+)
CI01000000_01347674_01352321 NA coding downstream 125157 1347674 ~ 1353228 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding downstream 183089 1405606 ~ 1410503 (+)
CI01000000_01459294_01485147 SLC44A1 coding downstream 236777 1459294 ~ 1485311 (+)
CI01000000_01511690_01517631 IKBKAP coding downstream 289173 1511690 ~ 1517719 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding downstream 457990 1680507 ~ 1691194 (+)
G416 NA non-coding upstream 26978 1190949 ~ 1195315 (+)
G446 NA non-coding upstream 48938 1171527 ~ 1173355 (+)
G466 NA non-coding upstream 104941 1117115 ~ 1117352 (+)
G424 NA non-coding upstream 123522 1089793 ~ 1098771 (+)
G479 NA non-coding downstream 26033 1248550 ~ 1248813 (+)
G480 NA non-coding downstream 30279 1252796 ~ 1253069 (+)
G483 NA non-coding downstream 32523 1255040 ~ 1255303 (+)
G499 NA non-coding downstream 81340 1303857 ~ 1304057 (+)
G449 NA non-coding downstream 139526 1362043 ~ 1363359 (+)
G350 NA other upstream 545356 671842 ~ 676937 (+)
G252 NA other upstream 715221 503209 ~ 507072 (+)
G435 NA other downstream 202604 1425121 ~ 1432854 (+)
G579 NA other downstream 592936 1767917 ~ 1908808 (+)
G2774 NA other downstream 3231261 4453778 ~ 4454232 (+)
G2850 NA other downstream 3503469 4725986 ~ 4726482 (+)
G6811 NA other downstream 8982314 10204831 ~ 10321679 (+)

Expression


Co-expression Network