faim2a (faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826)


Basic Information

Item Value
gene id faim2a
gene name faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 15120587 ~ 15127491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218586.1
ATTTTATCATTTCCGGAAACACCGGATGTACGTCATTACATGATTGAGTGCATTGTTTTTACTTTGGGTTTCGAGTGTCACGTTAGCTGTTACTGTAAGTAGACCATGAGTCTGCCAGCAGCCCCACCTAGCTATGCTGAAGCTACAGCAGGAGATAAAGAACAAGGAAGTGGTAGCTTCACCTACGCCTCCCAGCCTCCCCCAATGCCACCCCCAACCATGCCCATGCACCCCAGCTGGGCTTATGTGCATCCCGGCCCCAGTCCAGGATATTCCAATGCGTACGCTGCAGACATGTCTTCGCCCTTCTCTGACCCGAGCTCCAGCAGCAGCTTCGACGGCCTCAGTGGAAGCAACTGGGAGGACAAGAATATCCGCCGCATGTTCATCAGGAAGGTCTTCTGTATCCTCATGGTTCAGCTCATGGTCACATTTAGTGTGGTGTCACTCTTCACATTTTGTGAGCCAGTCCGGAAGTTTGTACAGTACAATCGAGTTTTCTATCTCACCTCATACATGACTTTCATGGGAACATACCTGATGCTTGTATGCAGTACTAATGCACGGCGAAGATACCCTACTAATATGATCCTTCTAGCCATTTTTACTTTGGCAATGTCCTATATGGCAGGCATGTTAGCCAGCTATCATAATACCAAAGTGGTGATGATGTGTGTGGGCATCACAGCGCTGGTGTGTCTGGCCATCACACTCTTCTGTTTCCAGTCCAGGGTTGACTTCACCACCTGTCATGGATTACTTTTCTCACTCATGATGGTGCTGATGATCACCGGGCTTCTGCTGTTCTTCACCGCACCGTTTGGATATATACCCTGGTTACATACTGCTTATGCTGGATTCGGCGCTCTGGTTTTCACTCTGtttCTGGCGTTTGACATGCAGCTGCTGATCGGCAACAGGCGGTACTCTCTGAACCCAGAGGAGCATGTGTTCGGAGCCATCTGCCTCTACATGGATGTGGTTtacatatttctctttttccttcaGCTCTTTGGGAGCCGTGAGTGAGGTGTTCATGCTGTGTCCGGGCTTTAGCCTTTGTCCTCcgttacacacacatacacaaacacacacccttCTCAGTTACTCTAAGGTTCGGTGAGGAGCGAACAGTCTTCCTTCATTCTGTGTGGCAGTTGAAGTTTGATGTGTGCTGTTGTTTTCCTTCTGGTCGTGGTTAGGCAGCTCTTCGCACACCTCGTATGCACCCTCGCTGCAAGGTAACCATGCTACCAATCAGATGTAAACATGCTGTTCAGGGTAGACAATCACTGCACATCATATTTGTGTCTTCGGTTCAAGTGATTTGAAAAACCCTAGGTCATCTGCATTGAATAATGTTTAGAATTCCAACACACAATaacgagaaaaaaaatcagtgtgtGATTTAGTGGGGAATATAGTGACAGTACTTACTTGTCAATGGATATTATCCCTTCGTTTGCACGTTGTATAGTTGAAATGAATCTTAAAACCGACAGGCATTTCTTTGTTGGCAATCACTAAATGTATAACGGGCTTTTCAACACGAGTTTCATCGGTCAGCAGCATTGTGCAGTGATATTATACCAGAGCTAAAGAGGCCCGTATGTGACACTTTGAATTGCTTTTTGTGCAATAACCTGCTCTTGAATGGGAGACAGAAGCTGGAGCTTAGAGGAACTTGTTGCGGTTAGTAAATATTTTGTGCCTCTGAATGCTGGTTGATAATGAGATTTCAGTGTTGTATACAGCcaatgcagatttattaaaaaaaaaaaattatactgtgTGCCAAATATAAGTCTGTCACGTGACGATGGCAGAGATTTTAATTGCGGCACTTGGTCCAACAGGTCAGTTGTGAGGTCTGCAATATATGTCTAAAAAATGCCTCGTAAATTAACTCGTAAGCGTGTGATGCTTGGGTGTTTTTGCTTATTTCCAAGACACttgattgcttttatttctaattttctaaGTCACCTTTGAGTAAACTGTTTTAGATACTGAATTATCAGGTGCTGACTTCTTTGAAAAGAGACGACTTTCAGAAGAGACAAAAGACGATATGATgtgttttatgatttgtttCAGGCACATAGGGCTTATTTTCCATGGGCTTTAATGTACTTCTCTTGTCTCTTAAGAACTTGTAGAGAGAGTGCGTTGACTTTTTAATTCGGGGAAACTTTTCTTAATCCTGAAAACCTCAATAGGTTTTTAGGTCATTTAGACCTCTGTTGACATTCCTCTTTGCTTGCCTTTTAAACTGTTTCTGTAAATTAAACATTCATCTTTTTGATGGTTTGGTGTTTCGTTTGTCACAGTGGGTTATAGGAGATAGAAAGCCTCACATACCCATAAACGTTCTTTCTTGATTTAAGGCTATGCTAACCTACAGTATTGTTGCTGAAAtggcagtttaaaaaaaacacacatttatgtattttctcaTGTGTACATTTCACACATGCAACTTTGTTCCTTTttagaataaatgtataaatgctttACAGACACTGAAAGCTTAACATGCTTGGTTTTGAAAGCTATTTTTTCAGTGGAAGGATTTAAATTTGAGGTGatctgtgtaattttttttgtgcagttaTTATTGTACGTGTGCATATAAAGTGTGAGTGTATATGGATCACCCTATGCCTttcctatctctctctctctctctctgtgcacTTCTGTGTCTACAAATGAATACGTTTAACCTATAATTACTGCATGATCTGTGGTACAGAGACCCACTGTGTGCTAATTTAGAACTGAAAATCATTCCCTCTTTTTCCTGTTAAAATACTAATGGCCAGTGGGTGATGACAGgatattgtgttgttttgtaaCCTCATCTGTgctttagtaaaataaatatacagaaccGTGAAAAATAA
>XR_006247132.1
ATTTTATCATTTCCGGAAACACCGGATGTACGTCATTACATGATTGAGTGCATTGTTTTTACTTTGGGTTTCGAGTGTCACGTTAGCTGTTACTGTAAGTAGACCATGAGTCTGCCAGCAGCCCCACCTAGCTATGCTGAAGCTACAGCAGGAGATAAAGAACAAGGAAGTGGTAGCTTCACCTACGCCTCCCAGCCTCCCCCAATGCCACCCCCAACCATGCCCATGCACCCCAGCTGGGCTTATGTGCATCCCGGCCCCAGTCCAGGATATTCCAATGCGTACGCTGCAGACATGTCTTCGCCCTTCTCTGACCCGAGCTCCAGCAGCAGCTTCGACGGCCTCAGTGGAAGCAACTGGGAGGACAAGAATATCCGCCGCATGTTCATCAGGAAGGTCTTCTGTATCCTCATGGTTCAGCTCATGGTCACATTTAGTGTGGTGTCACTCTTCACATTTTGTGAGCCAGTCCGGAAGTTTGTACAGTACAATCGAGTTTTCTATCTCACCTCATACATGACTTTCATGGGAACATACCTGATGCTTGTATGCAGTACTAATGCACGGCGAAGATACCCTACTAATATGATCCTTCTAGCCATTTTTACTTTGGCAATGTCCTATATGGCAGGCATGTTAGCCAGCTATCATAATACCAAAGTGGTGATGATGTGTGTGGGCATCACAGCGCTGGTGTGTCTGGCCATCACACTCTTCTGTTTCCAGTCCAGGGTTGACTTCACCACCTGTCATGGATTACTTTTCTCACTCATGATGGTGCTGATGATCACCGGGCTTCTGCTGTTCTTCACCGCACCGTTTGGATATAAAGGTACCAACCAGATTTTAGTCCTTCAGTAGATACCCTGGTTACATACTGCTTATGCTGGATTCGGCGCTCTGGTTTTCACTCTGtttCTGGCGTTTGACATGCAGCTGCTGATCGGCAACAGGCGGTACTCTCTGAACCCAGAGGAGCATGTGTTCGGAGCCATCTGCCT

Function

symbol description
faim2a Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human FAIM2 (Fas apoptotic inhibitory molecule 2).

NR:

description
hypothetical protein EH28_16446

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218586.1 True 2906 mRNA 0.42 12 15120587 15127491
XR_006247132.1 False 1001 transcript 0.49 13 15122525 15127491

Neighbor

gene id symbol gene type direction distance location
ttc19 ttc19,LOC107718030 coding downstream 420 15116514 ~ 15120167 (-)
slc4a2a slc4a2a,LOC107709836,LOC107657435,LOC107556941,LOC107718031 coding downstream 8443 15085362 ~ 15112144 (-)
ubtfl ubtfl,LOC107718032,LOC107583949,LOC107713995,LOC107556934 coding downstream 36433 15073685 ~ 15084154 (-)
asap1a asap1a,LOC107657433,LOC107701019,LOC107556902,LOC107718034 coding downstream 47501 15034956 ~ 15073086 (-)
fam49ba fam49ba,LOC107718035,LOC107556887,LOC107713994,LOC107701021,LOC107657432 coding downstream 86818 15018369 ~ 15033769 (-)
abcf2a abcf2a,LOC107657436,LOC107599875,LOC107709809,LOC107556971,LOC107701016,LOC107718028 coding upstream 493 15127984 ~ 15133761 (-)
LOC122328941 NA coding upstream 3108 15130599 ~ 15130715 (-)
tmub1 tmub1,LOC107657441,LOC107557000,LOC107701014,LOC107599877,LOC107709792,LOC107718025 coding upstream 27522 15155013 ~ 15161351 (-)
fastk fastk,LOC107599878,LOC107657442,LOC107718024,LOC107701011,LOC107557009 coding upstream 34856 15162347 ~ 15172881 (-)
LOC122358915 NA coding upstream 48875 15176366 ~ 15177620 (-)
G12199 NA non-coding downstream 185562 14934769 ~ 14935025 (-)
G12175 epdr1,LOC107664036,LOC107558964 non-coding downstream 265418 14853694 ~ 14855169 (-)
G12176 LOC107664036,LOC107558964 non-coding downstream 267035 14852910 ~ 14853552 (-)
G12159 NA non-coding downstream 271154 14772490 ~ 14849433 (-)
G12161 NA non-coding downstream 345096 14773753 ~ 14775491 (-)
G12308 NA non-coding upstream 95720 15223211 ~ 15223455 (-)
G12313 ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 non-coding upstream 110468 15237959 ~ 15240826 (-)
LOC122359617 NA non-coding upstream 419544 15547035 ~ 15553604 (-)
LOC122356097 NA non-coding upstream 591137 15718628 ~ 15754422 (-)
G12567 NA non-coding upstream 1171681 16299172 ~ 16299744 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 510321 14578995 ~ 14610266 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other downstream 1556222 13553773 ~ 13564365 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other downstream 1650324 13315229 ~ 13470263 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other downstream 2282494 12789524 ~ 12838093 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 3505649 11592441 ~ 11614938 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other upstream 6480 15133971 ~ 15153989 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other upstream 432172 15559663 ~ 15579706 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 1097232 16224723 ~ 16268835 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 1355669 16483160 ~ 16512019 (-)
G12658 lamc1,LOC107678923,LOC107726890,LOC107557259,LOC107722047 other upstream 1544085 16671576 ~ 16673710 (-)

Expression


Co-expression Network