tfa (LOC107732944,LOC107677673)


Basic Information

Item Value
gene id tfa
gene name LOC107732944,LOC107677673
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8523486 ~ 8528743 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218698.1
gatgattcGTCTGGATGTGTTTGACCCAACCCACCAGTGCTTCCAGAGCTCCTATAAAAAGCCTCCTCTCCCTTGTCTCCACCTGCCAAAAATCCCTGGTGAAGGCCTAACATGAACATCCTGCTCGTCTCATTCCTGGGGTGCCTTGTTGTGGCACTGCCCTCAGCCAGCgctcaaaaagtcaaatggTGTGTGAAGTCTCAGAATGAGCTGTTGAAATGCCAGCACCTTGCCACCAAATCACCAGAGCTTGAGTGTTATATCAAGGCTTCTGTTACTGAATGCATGACAAGCATCAAGGATGGCGATGCAGATGCTATAACTGTAGATGGAGAACATATTTACAAAGCTGGACTGCTTCCATACGATCTCCGTCCCCTCATAGCAGAGAAATCTaaagaaaAATGCTATTATGCTGTGGCTGTGGTCAAGAAGGACGCCGACTTTACCATCAGTGATCTCAAAGGAAAGACTTCGTGCCACAGTTGTTACCAAAGTCCACAAGGCTGGAGTATACCTATAGGAAGACTGGTTGCAGAAAAGAAGATTATGTGGGATGGTCCTGATGACATGACTCTCGAAAAGGCTGTGTCACAGTTCTTTTCAAGCAGCTGCGTTCCTGGAATATCCAAAGCTAGATACCCAAGCCTGTGCCAAGCCTGCCAGGGTGACTGCAGCtgttcacaaaatgaaaaatacagcgGTGATGAAGGAGCCTTACAGTGCTTGAAAGCTGGTCATGGACAAGTTGCTTTTGTTCGTTGGGATGCCATACCAGCGAGTGAGAGGCCGAACTACCAGCTGCTGTGCATGGATGACAGCAGGAAAAGCGTTGAGGAGTACAAGGAATGCTACCTCGGCAAAGAGCCTTACCGTGCTGTCATTGGCCGCAAGGATGCGGATTCACAGAGCATTTATAAAGTCCTTAAACAGATTCCGGATTCAGATCTTTTCTCTTCTGCCGCTTTTGGGGGTAAAGATCTGATGTTCTTAGACTCTGGACATGCACTGATGGAGCTCCCTAAAACAGACTCCTTCTTCTACCTGGGAGAAGATTACTTTGACGCCATGCGTGCCCTTAGAGGTGGGAGCCCGCCAGCCTTGCCTCAAGACCGTCCAATTGAATGGTGTACCATTAGCCACGCAGAGCAAGAGAAGTGTGACAAATTAAACACTCAGATTCCCCGTATCGCGTGCAAGAGGGCATCATCTGTGGACGAGTGCATTCAAAAAATCAAGCGCAAAGAAGCAGATGCCATTGCAGTTGATGGTGGCCAGGTATATATTGCTGGAAAATGCGGTCTAGCTCCGGTTATGGTTGAGCAGTATGATCAACAAAGCTGTACAGCTGGTGGAGAGGCCTCAAGTTACTACGTCGTGGCCGTGGTGCGTAAGGGCTCAGGTGTAACCTGGGGCAGTCTGCGAGGGAGGAAGTCCTGCCACACCGGCCTGAACCGCAATGCTGGCTGGAAAGTCCCAGATTCAGCCATATGTGGCAAAACAGACAAATGCACCCTATACgatttcttcagtaaaggctgTGCTCCTGGCGCTGATCCTCAATCCAACATGTGTGAACTGTGTAAAGGCAGCGGGAAGGCGGTGGGAGATGATAGCAAGTGCAAAGCATCTTCTGCGGAATTGTATTATGGCTATGATGGGGCTTTCAGGTGTCTTGCAGAAAAAACTGGTGAAGTTGCTTTTATCAAGCACACTATTGTTGGGGATTACACAGATGGCAAAGGACCAGAATGGGCCAAGGAACTGAAGTCAGGCGATTTCGAACTGATCTGTCCAGAATCGCCAGACAAAACATTTAAGCACGATGAATTTGTTAAATGTAACCTCGCCACAGTGCCAGCTCATGCTGTGATCACCCGAGAAGATGCACGCACCGATGTGGTGAACGTTCTGAAGCAGGCTCAATCCAGTTCAGACGGACTTTTCAAGTCAGAGGGCGAAAGAAACCTCCTTTTCTCTGATTCCACAAAATGCCTTCAAGAGATTACTAAACCTCTGAGCGAATTCCTGGATAAAAAGTACACCGACATGATTGAGAGGACCTACGCTACTGGCCAGGGTGAACCAGATCTGGTGAAGGCATGCACACCGCTCAGTTGCGAGTAAAACGGAGTTCCTAACAGAGATACACACCAAATTCGGGCTATTTGAGCTTTGTCTGACATGTTTCCCAAAATAAGAATCTATATTTCTGAATCACTCTATTTCTCCTGATAATTGAACAGAATGAGGGAAACGTGATGTTCATGTTAAGCAGCAGTGTCGGTTCATATCTTGTCGGTCAAACTGTTCACATTCAGGAACAAAATGGATGTGATTAAGTTTCTCTTTCATTACAACAGGGgatgaaataaaactttttttctcaaa

Function

NR:

description
transferrin isoform X1

GO: NA

KEGG:

id description
K14736 TF; transferrin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218698.1 True 2391 mRNA 0.47 17 8523486 8528743

Neighbor

gene id symbol gene type direction distance location
eif4g1a LOC107563298,LOC107732943,LOC107677601 coding downstream 3907 8499265 ~ 8519579 (-)
fam131a fam131a,LOC107677593,LOC107700514,LOC107732946,LOC107710547,LOC107563308,LOC106528322 coding downstream 26841 8487110 ~ 8496645 (-)
thpo thpo,LOC107553247 coding downstream 87204 8430547 ~ 8436282 (-)
cdc20 cdc20,LOC107732200,LOC107553255,LOC107563294,LOC107700550,LOC107710546,LOC107677877 coding downstream 137228 8382987 ~ 8386258 (-)
kncn kncn,si:dkey-225f23.3,LOC107700491,LOC107710543,LOC107732197 coding downstream 157199 8357731 ~ 8366287 (-)
ubxn7 ubxn7,LOC107677685,LOC107553259,LOC107732947,LOC107710610,LOC107563300,LOC107700557 coding upstream 8472 8537215 ~ 8545646 (-)
ppp1r7 ppp1r7,LOC107700558,LOC107710611,LOC107677693,LOC107732935 coding upstream 19147 8547890 ~ 8552844 (-)
gk5 gk5,LOC107710612,LOC107700559 coding upstream 24532 8553275 ~ 8565815 (-)
xrn1 xrn1,LOC107710613,LOC107732934,LOC107553240,LOC107563287 coding upstream 37638 8566381 ~ 8585034 (-)
LOC122358258 NA coding upstream 57479 8586222 ~ 8589901 (-)
G10194 NA non-coding downstream 453133 8070154 ~ 8070353 (-)
G10185 NA non-coding downstream 588861 7934401 ~ 7934625 (-)
LOC122328801 NA non-coding downstream 731876 7788737 ~ 7791610 (-)
G10165 NA non-coding downstream 991421 7526339 ~ 7532065 (-)
G10029 rpl5,LOC107568084,LOC107694375,LOC107743362,LOC107716952 non-coding downstream 1317084 7204484 ~ 7206402 (-)
G10345 NA non-coding upstream 101663 8630406 ~ 8630606 (-)
G10389 NA non-coding upstream 226106 8754849 ~ 8755145 (-)
G10400 NA non-coding upstream 269839 8798582 ~ 8798986 (-)
G10432 NA non-coding upstream 400747 8929490 ~ 8930083 (-)
G10438 NA non-coding upstream 414356 8943099 ~ 8943593 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 95582 8403327 ~ 8427904 (-)
G10213 NA other downstream 415698 8106856 ~ 8107788 (-)
G10196 NA other downstream 451652 8070776 ~ 8071834 (-)
G10178 NA other downstream 738332 7784468 ~ 7785154 (-)
G10170 kdm4ab,LOC107564389,LOC107700543,LOC107551714,LOC107684932,LOC107743373 other downstream 1029642 7492206 ~ 7493844 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other upstream 653313 9182056 ~ 9210041 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other upstream 962820 9491563 ~ 9519781 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other upstream 1077580 9606323 ~ 9618473 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 1551439 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 1591230 10119973 ~ 10139585 (-)

Expression


Co-expression Network