sept2 (sept2,LOC107722571,LOC107693718)


Basic Information

Item Value
gene id sept2
gene name sept2,LOC107722571,LOC107693718
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10062763 ~ 10071463 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218790.1
TCTTACGTTCCTCGCTTCACTCTTGTGCTTCGCTGTCGGCGTTTAGTGAGAGTTTTCCGGAATCTCAGGAATTTGGCTGTCCGTCTTCTTAACCTCCTGCGTTACCGAACTCGAGATTTTCTACGACTGAAAGGTCTGGCCCGAGCTCAAAATGTCTCAAGCCGATAAACTGAAGCAGGGACAGTTTACAAACCCAGAGACCCCTGGGTATGTGGGATTTGCAAATTTGCCAAATCAGGTGCATCGGAAATCAGTGAAGAAGGGCTTCGAGTTCACTCTCATGGTGGTGGGTGAGTCTGGTTTGGGGAAGTCCACGCTGATCAACAGTTTGTTCCTCACTGATCTCTACCCTGAGAGGGTCATTCCTGGTGCTGCAGAGAAGATTGAGCGCACGGTGCAGATCGAGGCCTCGACGGTGGAGATCGAGGAGCGTGGCGTGAAGCTGCGTCTCACTGTGGTCGACACGCCTGGATACGGCGACGCCATCAACAGCCAGGACTGTTTTAACACCATTATCTCCTACATCGATGACCAGTTTGAGCGCTACCTGCACGATGAGAGTGGACTCAACCGCAGGCACATTGTGGACAACCGCGTGCACTGCTGCTTCTACTTCATCTCCCCTCTGGGTCACGGGCTGAAGCCTCTAGACGTCCAGTTCATGAAGGCCATTCACAACAAAGTGAATGTGGTTCCTGTTATTGCTAAAGCAGATACGCTGACgctgagggagagagagagactcaagCGCAGAATTCTGGATGAAATCGATGAGCATGGCATCAAGATCTATCACCTCCCTGATGCCGAGTCTGACGAGGATGAAGATTTCAAAGAGCAGACCCGGATTCTCAAGGCCAGCATACCGTTCGCCGTGGTGGGATCCAACCAGCAGATTGAGGCTAAGGGGAAGAAAGTGAGAGGACGTTTGTATCCATGGGGTGTGGTGGAGGTGGAAAACCCAGAACACAACGACTTCCTCAAGCTTCGCACCATGCTAATCACCCACATGCAGGACCTGCAGGAAGTTACTCAGGACCTTCACTACGAGAACTTCCGCTCGGAGCGCCTCAAACGGGGCGGCAGGTTGTCCTCCCACGGTTATATTCTGCCTCTGTCGCCTGCGAAGGCTCCGGAGCCGGAGGAAATGGACAAGGATATGATCTTGCAGGAGAAGGAGGCTGAGcTGAGGCGAATGCAGGAGATGATCGCTAAGATGCAGGCGCAGATGCAGAAACAGGGAGACGGAGAGGGAGACAGCCCACATCTGTGAGAAACACGATGTTGACCTGTCGTTCGAGCTTGACCCAGTCAGACACGAAACGAGAAGTTAAATGTGGAAAAATAGAAGAGACTGGTCCTTAGCTCGTCTTGCTTGCCATTTTCTTAGTTTCTTTCACTCTTGTACGATTTGATATTTTTGgttaaggtgttttttttttttttttttttttaagcagtattaattttgtttttgccattttattcaaCCCACCcctcaaaaaactttttttttttttctgttacgaAAGCCAAATGCTGCTGGAAAGGAATCTTTTACTGTAGCGCACCTTTAATAGTAGCGTAGCTCCATGACCGCTCATTTCTCTCCCATCAAGCTAAAGAAGCACTGTGAACATACAGCCAGCTGTTGAATTCGAGTGTCACGGTGGCGGTCTTTTGGAGAAACCGTTTTATACTGTTCCTAAATGTTGCCAGAGAGATTGCCGTCCTCCTAAACAGGAGTTTTCTGAAGCACTTCTCTCTTTTCCCTGCATGAAGTCTTGAAATGCGTGCCGTTCGGTTGAATGGTCCCCAAACAGTTGCAAAACGTTATACTGTGACCCATGATTCCTTCCCTATGCCGTCTAATGAAGAATACGATGTTCTCTAATGTTAAAGCTcattttgctgatttttttttttttatgtacttgaGTGCATACTGTCGTATATTTGCTATCAGACGTTGTTCTGGTATGAGTGCAGTGTGGAGTGAAATTCGGACGCATTGAAAGATGCTGTTGTGATCTTTAACCTTGACGCATGCCAAGTTTTTACCTCTTCTTACGGTTCAAATATTTTATCTTATCCCTGTTGCTAAGTCAAATTTCcacatcataaataataaaagttttaaatgaaatatccGAAAATGTAGGTTTCTATCTGTTACGCAAAAGCAAATATAACTTTTATACAGTTGAATTTGATTTCTATATTTGGTCACGAAAACTCTGCCGCTGTTAACATTCCAGTCTTAATGTTTCACTTGAGAACTTTCTATTAAACCATTATTGTCTATCATcttgtaataaaattttgtatTGAAAGTG
>XM_043218799.1
TGTAATAGCTTTTTGTCGACCGCTTTCTCGTGCTTGTCTGGCCCGAGCTCAAAATGTCTCAAGCCGATAAACTGAAGCAGGGACAGTTTACAAACCCAGAGACCCCTGGGTATGTGGGATTTGCAAATTTGCCAAATCAGGTGCATCGGAAATCAGTGAAGAAGGGCTTCGAGTTCACTCTCATGGTGGTGGGTGAGTCTGGTTTGGGGAAGTCCACGCTGATCAACAGTTTGTTCCTCACTGATCTCTACCCTGAGAGGGTCATTCCTGGTGCTGCAGAGAAGATTGAGCGCACGGTGCAGATCGAGGCCTCGACGGTGGAGATCGAGGAGCGTGGCGTGAAGCTGCGTCTCACTGTGGTCGACACGCCTGGATACGGCGACGCCATCAACAGCCAGGACTGTTTTAACACCATTATCTCCTACATCGATGACCAGTTTGAGCGCTACCTGCACGATGAGAGTGGACTCAACCGCAGGCACATTGTGGACAACCGCGTGCACTGCTGCTTCTACTTCATCTCCCCTCTGGGTCACGGGCTGAAGCCTCTAGACGTCCAGTTCATGAAGGCCATTCACAACAAAGTGAATGTGGTTCCTGTTATTGCTAAAGCAGATACGCTGACgctgagggagagagagagactcaagCGCAGAATTCTGGATGAAATCGATGAGCATGGCATCAAGATCTATCACCTCCCTGATGCCGAGTCTGACGAGGATGAAGATTTCAAAGAGCAGACCCGGATTCTCAAGGCCAGCATACCGTTCGCCGTGGTGGGATCCAACCAGCAGATTGAGGCTAAGGGGAAGAAAGTGAGAGGACGTTTGTATCCATGGGGTGTGGTGGAGGTGGAAAACCCAGAACACAACGACTTCCTCAAGCTTCGCACCATGCTAATCACCCACATGCAGGACCTGCAGGAAGTTACTCAGGACCTTCACTACGAGAACTTCCGCTCGGAGCGCCTCAAACGGGGCGGCAGGTTGTCCTCCCACGGTTATATTCTGCCTCTGTCGCCTGCGAAGGCTCCGGAGCCGGAGGAAATGGACAAGGATATGATCTTGCAGGAGAAGGAGGCTGAGcTGAGGCGAATGCAGGAGATGATCGCTAAGATGCAGGCGCAGATGCAGAAACAGGGAGACGGAGAGGGAGACAGCCCACATCTGTGAGAAACACGATGTTGACCTGTCGTTCGAGCTTGACCCAGTCAGACACGAAACGAGAAGTTAAATGTGGAAAAATAGAAGAGACTGGTCCTTAGCTCGTCTTGCTTGCCATTTTCTTAGTTTCTTTCACTCTTGTACGATTTGATATTTTTGgttaaggtgttttttttttttttttttttttaagcagtattaattttgtttttgccattttattcaaCCCACCcctcaaaaaactttttttttttttctgttacgaAAGCCAAATGCTGCTGGAAAGGAATCTTTTACTGTAGCGCACCTTTAATAGTAGCGTAGCTCCATGACCGCTCATTTCTCTCCCATCAAGCTAAAGAAGCACTGTGAACATACAGCCAGCTGTTGAATTCGAGTGTCACGGTGGCGGTCTTTTGGAGAAACCGTTTTATACTGTTCCTAAATGTTGCCAGAGAGATTGCCGTCCTCCTAAACAGGAGTTTTCTGAAGCACTTCTCTCTTTTCCCTGCATGAAGTCTTGAAATGCGTGCCGTTCGGTTGAATGGTCCCCAAACAGTTGCAAAACGTTATACTGTGACCCATGATTCCTTCCCTATGCCGTCTAATGAAGAATACGATGTTCTCTAATGTTAAAGCTcattttgctgatttttttttttttatgtacttgaGTGCATACTGTCGTATATTTGCTATCAGACGTTGTTCTGGTATGAGTGCAGTGTGGAGTGAAATTCGGACGCATTGAAAGATGCTGTTGTGATCTTTAACCTTGACGCATGCCAAGTTTTTACCTCTTCTTACGGTTCAAATATTTTATCTTATCCCTGTTGCTAAGTCAAATTTCcacatcataaataataaaagttttaaatgaaatatccGAAAATGTAGGTTTCTATCTGTTACGCAAAAGCAAATATAACTTTTATACAGTTGAATTTGATTTCTATATTTGGTCACGAAAACTCTGCCGCTGTTAACATTCCAGTCTTAATGTTTCACTTGAGAACTTTCTATTAAACCATTATTGTCTATCATcttgtaataaaattttgtatTGAAAGTG
>XM_043218807.1
TCTTACGTTCCTCGCTTCACTCTTGTGCTTCGCTGTCGGCGTTTAGTGAGAGTTTTCCGGAATCTCAGGAATTTGGCTGTCCGTCTTCTTAACCTCCTGCGTTACCGAACTCGAGATTTTCTACGACTGAAAGGTCTGGCCCGAGCTCAAAATGTCTCAAGCCGATAAACTGAAGCAGGGACAGTTTACAAACCCAGAGACCCCTGGGTATGTGGGATTTGCAAATTTGCCAAATCAGGTGCATCGGAAATCAGTGAAGAAGGGCTTCGAGTTCACTCTCATGGTGGTGGGTGAGTCTGGTTTGGGGAAGTCCACGCTGATCAACAGTTTGTTCCTCACTGATCTCTACCCTGAGAGGGTCATTCCTGGTGCTGCAGAGAAGATTGAGCGCACGGTGCAGATCGAGGCCTCGACGGTGGAGATCGAGGAGCGTGGCGTGAAGCTGCGTCTCACTGTGGTCGACACGCCTGGATACGGCGACGCCATCAACAGCCAGGACTGTTTTAACACCATTATCTCCTACATCGATGACCAGTTTGAGCGCTACCTGCACGATGAGAGTGGACTCAACCGCAGGCACATTGTGGACAACCGCGTGCACTGCTGCTTCTACTTCATCTCCCCTCTGGGTCACGGGCTGAAGCCTCTAGACGTCCAGTTCATGAAGGCCATTCACAACAAAGTGAATGTGGTTCCTGTTATTGCTAAAGCAGATACGCTGACgctgagggagagagagagactcaagCGCAGAATTCTGGATGAAATCGATGAGCATGGCATCAAGATCTATCACCTCCCTGATGCCGAGTCTGACGAGGATGAAGATTTCAAAGAGCAGACCCGGATTCTCAAGGCCAGCATACCGTTCGCCGTGGTGGGATCCAACCAGCAGATTGAGGCTAAGGGGAAGAAAGTGAGAGGACGTTTGTATCCATGGGGTGTGGTGGAGGTGGAAAACCCAGAACACAACGACTTCCTCAAGCTTCGCACCATGCTAATCACCCACATGCAGGACCTGCAGGAAGTTACTCAGGACCTTCACTACGAGAACTTCCGCTCGGAGCGCCTCAAACGGGGCGGCAGGAAGGCTCCGGAGCCGGAGGAAATGGACAAGGATATGATCTTGCAGGAGAAGGAGGCTGAGcTGAGGCGAATGCAGGAGATGATCGCTAAGATGCAGGCGCAGATGCAGAAACAGGGAGACGGAGAGGGAGACAGCCCACATCTGTGAGAAACACGATGTTGACCTGTCGTTCGAGCTTGACCCAGTCAGACACGAAACGAGAAGTTAAATGTGGAAAAATAGAAGAGACTGGTCCTTAGCTCGTCTTGCTTGCCATTTTCTTAGTTTCTTTCACTCTTGTACGATTTGATATTTTTGgttaaggtgttttttttttttttttttttttaagcagtattaattttgtttttgccattttattcaaCCCACCcctcaaaaaactttttttttttttctgttacgaAAGCCAAATGCTGCTGGAAAGGAATCTTTTACTGTAGCGCACCTTTAATAGTAGCGTAGCTCCATGACCGCTCATTTCTCTCCCATCAAGCTAAAGAAGCACTGTGAACATACAGCCAGCTGTTGAATTCGAGTGTCACGGTGGCGGTCTTTTGGAGAAACCGTTTTATACTGTTCCTAAATGTTGCCAGAGAGATTGCCGTCCTCCTAAACAGGAGTTTTCTGAAGCACTTCTCTCTTTTCCCTGCATGAAGTCTTGAAATGCGTGCCGTTCGGTTGAATGGTCCCCAAACAGTTGCAAAACGTTATACTGTGACCCATGATTCCTTCCCTATGCCGTCTAATGAAGAATACGATGTTCTCTAATGTTAAAGCTcattttgctgatttttttttttttatgtacttgaGTGCATACTGTCGTATATTTGCTATCAGACGTTGTTCTGGTATGAGTGCAGTGTGGAGTGAAATTCGGACGCATTGAAAGATGCTGTTGTGATCTTTAACCTTGACGCATGCCAAGTTTTTACCTCTTCTTACGGTTCAAATATTTTATCTTATCCCTGTTGCTAAGTCAAATTTCcacatcataaataataaaagttttaaatgaaatatccGAAAATGTAGGTTTCTATCTGTTACGCAAAAGCAAATATAACTTTTATACAGTTGAATTTGATTTCTATATTTGGTCACGAAAACTCTGCCGCTGTTAACATTCCAGTCTTAATGTTTCACTTGAGAACTTTCTATTAAACCATTATTGTCTATCATcttgtaataaaattttgtatTGAAAGTG

Function

symbol description
sept2 Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in several processes, including cilium assembly; cytoskeleton-dependent cytokinesis; and regulation of exocytosis. Predicted to act upstream of or within cell division. Predicted to be located in several cellular components, including ciliary membrane; cleavage furrow; and midbody. Predicted to be part of septin complex. Predicted to be active in cell division site; cytoskeleton; and synaptic vesicle. Is expressed in artery; notochord; and vein. Orthologous to human SEPTIN2 (septin 2).

NR:

description
septin-2B isoform X1

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0031105 septin complex cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K16942 SEPT2; septin 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218790.1 True 2336 mRNA 0.46 13 10062763 10071463
XM_043218799.1 False 2238 mRNA 0.45 13 10062763 10070344
XM_043218807.1 False 2297 mRNA 0.45 13 10062763 10071463

Neighbor

gene id symbol gene type direction distance location
bokb bokb,LOC107693720,LOC107722584 coding downstream 9320 10049401 ~ 10053443 (-)
zgc:161973 LOC107722582,LOC107693721,LOC107718160,LOC107585707 coding downstream 16883 10040661 ~ 10045880 (-)
kif1ab kif1ab,LOC107722550,LOC107691514,LOC107693723,LOC108432503,LOC107589853 coding downstream 29465 10008346 ~ 10033298 (-)
espnlb espnlb,LOC107691737,LOC107722507,LOC107718163,LOC107580328,LOC107589891 coding downstream 55174 9997644 ~ 10007589 (-)
rab6bb rab6bb,rab6b,LOC107589854,LOC107693724,LOC107718122,LOC108432504 coding downstream 67143 9989129 ~ 9995620 (-)
lrrc8da lrrc8d,lrrc8da,LOC107722644,LOC107585666,LOC107718115,LOC107691468,LOC107589846,LOC107722505 coding upstream 36668 10108131 ~ 10113585 (-)
hs2st1a hs2st1a,hs2st1,LOC107718112,LOC107589844,LOC107691454,LOC107722647,LOC107585633,LOC106598897 coding upstream 75119 10146582 ~ 10158021 (-)
tox tox,LOC107718108,LOC107722616,LOC107585594 coding upstream 151868 10223331 ~ 11062973 (-)
trnak-cuu_1 NA coding upstream 318088 10389551 ~ 10389623 (-)
LOC122359424 mplkip,LOC107722562,LOC107585495,LOC107688429,LOC107718104,LOC107689394,LOC107589834 coding upstream 358331 10429794 ~ 10433121 (-)
G10812 NA non-coding downstream 15390 10046818 ~ 10047373 (-)
G10773 NA non-coding downstream 134926 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 314023 9748387 ~ 9748740 (-)
G10621 NA non-coding downstream 456568 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 601679 9457163 ~ 9461084 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 87115 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 154755 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 595014 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 596179 10667642 ~ 10668967 (-)
G11063 rpp40,LOC107688445,LOC107722637,LOC107689405 non-coding upstream 597599 10669062 ~ 10669414 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 444290 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 542982 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 852722 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1634859 8403327 ~ 8427904 (-)
G10213 NA other downstream 1954975 8106856 ~ 8107788 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 8719 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 48510 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 69472 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 242570 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 304600 10376063 ~ 10378211 (-)

Expression


Co-expression Network