elovl8a (elovl8a,LOC107679337,LOC107602526,LOC107714853)


Basic Information

Item Value
gene id elovl8a
gene name elovl8a,LOC107679337,LOC107602526,LOC107714853
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12660915 ~ 12664376 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219008.1
CTGGGCAACGCTCAAAATAGCTGTTGGTAAAGAATAAAGTTATCCGGGGGATTTTGGTAATCCGTCTTGTGGAGGATGCCATGTGTAAACGTCTTAACTCCTCATTGAGCCACTGATTTATGCTGAACGAGAGCTCGGTGTCGTAATTCCGTTGATAACAACATGTTTTGTCTCTCGTGGAGCTAAAATAGCTATCATAATTGACATTTTTACCCAGTTAGGCTACTCCTTTCGCTGCAAAAGTCACACCCTTCAAAGAAGCCTCGCGCTGTTCCCGCATTCAACCGATGGATGGCGCTGTTCGGGCATTACTGAATGAACACCGGGCGTAATGGTGTCTGTATCCCCGTCGACATGGCAGAGGATCCAGATATTTCACCAGTGGGTCCTAGAAAACGGAGACAAGAGGACAGATGGATGGCTTTTGGTTTACTCTCCTCTGTCTGTCGGTGGGATCTTCCTGTTTTACCTGGTCATCGTCTGGCTTGGTCCCAAACTGATGTCTTACAGAGAACCAGTCAACATCAAAGCTCTccttattatttacaatttttccaTGGTGTGCCTTTCTGCTTACATGTTTTATGAGTTCACAGCATCTTCTTGGTTTGCGAATTACAGTTTGGTTTGTCAGCCTGTCGACTACTCTGAAACACCATTGGCAATGAGGATGGCCAGAGTGTGCTGGTGGTTCTACTTCTCCAAAGTCATTGAACTTACCGATACAGTGTTCTTCATTCTGAGGAAGAAGAATAATCAACTGACCTTTTTGCATGTTTATCATCATGGCACCATGATTTTCAACTGGTGGGCGGGGGTCAAGTATGTTGCGGGAGGGCAGTCGTTCTTTATTGGCCTCATAAATTCTTTTGTTCACGTGGTGATGTACATGTACTATGGCCTGGCAGCACTGGGCCAGCGAATGCATAAGTACTTGTGGTGGAAACACTACCTTACTTCGCTTCAGCTGCTCCAGTTCTTCATTGTGACCATTCACACTGCAGTTAACCTCTTTGCTGACTGTGACTTTCCTGACTCCATGAATATTATAGTGCTCGGATATGCCTTCAGCCTGATCGGTTTGTTTAGTAACTTTTATTATCAGAACTATATTTCCAAGAAGACCAAGGTGGCATGATAGCATgaagattaaaatatattatatactatgaCTGTCTGAATAAAACGGTGCCATCCATTGATCCCCAATGTGGCGACTGAGACCGTCTTAAGGACTCTGTTTATCTCAGATCCATTTGTCTGTGTATACTCCCCTCCTCCAAACAGAGTCCATACAATCTCCACACTCCCATCCCCCTCTGGTCATTAGGGATTGAGACCCTGCAACGCTCTAGTGATCTGGCCAAATTGAAATAAACCCGAGTCCACCTTCTGCTCCTCACTCACTTATTTATCTAATCTCCCACTGTGACACTTCATTTGTTTTACCACTCATTGGATCAGGTCAGCCAATCACAGTGTAGCTGGGGGGAGTGGTTTATTTGGAGCCCTACCTTCTCTACATCTGCCCTCTTCTATCAGTCCTTAAACctatacctttttaaaatacagtttgttatatacatgtatgtatatcccaaataaaagttatttttcttttttttttt
>XM_043219017.1
CTGGGCAACGCTCAAAATAGCTGTTGGTAAAGAATAAAGTTATCCGGGGGATTTTGGTAATCCGTCTTGTGGAGGATGCCATGTGTAAACGTCTTAACTCCTCATTGAGCCACTGATTTATGCTGAACGAGAGCTCGGTGTCGTAATTCCGTTGATAACAACATGTTTTGTCTCTCGTGGAGCTAAAATAGCTATCATAATTGACATTTTTACCCAGTTAGGCTACTCCTTTCGCTGCAAAAGTCACACCCTTCAAAGAAGCCTCGCGCTGTTCCCGCATTCAACCGATGGATGGCGCTGTTCGGGCATTACTGAATGAACACCGGGCGTAATGGTGTCTGTATCCCCGTCGACATGGCAGAGGATCCAGATATTTCACCAGTGGGTCCTAGAAAACGGAGGCTGCATTTAAGAAAGCAGTATGAAATACTTTGATAAAGCACTTTAACAGCTACATCGGGTAATATAACGAGCTAATGAAACTCGTTCCAACAGACAAGAGGACAGATGGATGGCTTTTGGTTTACTCTCCTCTGTCTGTCGGTGGGATCTTCCTGTTTTACCTGGTCATCGTCTGGCTTGGTCCCAAACTGATGTCTTACAGAGAACCAGTCAACATCAAAGCTCTccttattatttacaatttttccaTGGTGTGCCTTTCTGCTTACATGTTTTATGAGTTCACAGCATCTTCTTGGTTTGCGAATTACAGTTTGGTTTGTCAGCCTGTCGACTACTCTGAAACACCATTGGCAATGAGGATGGCCAGAGTGTGCTGGTGGTTCTACTTCTCCAAAGTCATTGAACTTACCGATACAGTGTTCTTCATTCTGAGGAAGAAGAATAATCAACTGACCTTTTTGCATGTTTATCATCATGGCACCATGATTTTCAACTGGTGGGCGGGGGTCAAGTATGTTGCGGGAGGGCAGTCGTTCTTTATTGGCCTCATAAATTCTTTTGTTCACGTGGTGATGTACATGTACTATGGCCTGGCAGCACTGGGCCAGCGAATGCATAAGTACTTGTGGTGGAAACACTACCTTACTTCGCTTCAGCTGCTCCAGTTCTTCATTGTGACCATTCACACTGCAGTTAACCTCTTTGCTGACTGTGACTTTCCTGACTCCATGAATATTATAGTGCTCGGATATGCCTTCAGCCTGATCGGTTTGTTTAGTAACTTTTATTATCAGAACTATATTTCCAAGAAGACCAAGGTGGCATGATAGCATgaagattaaaatatattatatactatgaCTGTCTGAATAAAACGGTGCCATCCATTGATCCCCAATGTGGCGACTGAGACCGTCTTAAGGACTCTGTTTATCTCAGATCCATTTGTCTGTGTATACTCCCCTCCTCCAAACAGAGTCCATACAATCTCCACACTCCCATCCCCCTCTGGTCATTAGGGATTGAGACCCTGCAACGCTCTAGTGATCTGGCCAAATTGAAATAAACCCGAGTCCACCTTCTGCTCCTCACTCACTTATTTATCTAATCTCCCACTGTGACACTTCATTTGTTTTACCACTCATTGGATCAGGTCAGCCAATCACAGTGTAGCTGGGGGGAGTGGTTTATTTGGAGCCCTACCTTCTCTACATCTGCCCTCTTCTATCAGTCCTTAAACctatacctttttaaaatacagtttgttatatacatgtatgtatatcccaaataaaagttatttttcttttttttttt

Function

symbol description
elovl8a Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane.

NR:

description
elongation of very long chain fatty acids protein 4-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219008.1 False 1628 mRNA 0.43 8 12660915 12664376
XM_043219017.1 True 1722 mRNA 0.43 8 12660915 12664376

Neighbor

gene id symbol gene type direction distance location
selenop2 LOC107679336,LOC107729074,LOC107674235 coding upstream 473 12658046 ~ 12660442 (+)
si:ch73-382f3.1 si:ch73-382f3.1,LOC107586484,LOC107729092,LOC107602516,LOC107674450,LOC107714852,LOC107679322 coding upstream 4031 12653878 ~ 12656884 (+)
tesk2 tesk2,LOC107728975,LOC107679327,LOC107602527,LOC107714850,LOC107674209,LOC107585988 coding upstream 10505 12630031 ~ 12650410 (+)
cdh7a cdh7,LOC107584702,LOC107602530,LOC108432272 coding upstream 119342 12488213 ~ 12541573 (+)
impa1 impa1,impa1.3,LOC107688552,LOC107586492,LOC107602533,LOC107729422,LOC107714831,LOC107674158 coding upstream 280305 12376957 ~ 12380610 (+)
zswim5 zswim5,LOC107728925,LOC107674240,LOC107602525,LOC107584626,LOC107714849,LOC107679324 coding downstream 35556 12699932 ~ 12739838 (+)
tmem68 tmem68,LOC107674304,LOC107584594,LOC107714846,LOC107602519,LOC107729056,LOC107679320 coding downstream 120752 12785128 ~ 12790107 (+)
buc buc,LOC107679335,LOC107584532,LOC107674330,LOC107567412,LOC107714843,LOC107728998 coding downstream 199489 12863865 ~ 12867056 (+)
mc4r mc4r,LOC107678942,LOC107714827,LOC107729066,LOC107586449 coding downstream 238756 12903132 ~ 12904941 (+)
cdh10a cdh10a,LOC107586427,LOC107667292,LOC107737811,LOC107567403,LOC107678940,LOC107716359,LOC108280231 coding downstream 463035 13127411 ~ 13146799 (+)
G11595 dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195 non-coding upstream 39501 12615995 ~ 12621414 (+)
G11593 NA non-coding upstream 46319 12614375 ~ 12614596 (+)
G11590 NA non-coding upstream 115323 12545353 ~ 12545592 (+)
G11505 NA non-coding upstream 321866 12337667 ~ 12339049 (+)
G11419 NA non-coding upstream 559789 12100875 ~ 12101126 (+)
G11618 NA non-coding downstream 32710 12697086 ~ 12697294 (+)
G11622 NA non-coding downstream 81436 12745812 ~ 12759891 (+)
LOC122362827 NA non-coding downstream 144696 12809072 ~ 12813327 (+)
G11740 NA non-coding downstream 650853 13315229 ~ 13466961 (+)
LOC122362453 NA non-coding downstream 704217 13368593 ~ 13410609 (+)
LOC122358236 NA other upstream 34528 12623823 ~ 12626387 (+)
pld1a pld1a,LOC107688495,LOC107550602,LOC107680234,LOC107722545,LOC108442335 other upstream 723325 11908073 ~ 11937590 (+)
mast3a LOC107722547,LOC107688474,LOC107680242,LOC107550619,LOC107709878,LOC107586070 other upstream 1153211 11482104 ~ 11507704 (+)
rps28 NA other upstream 1216344 11422090 ~ 11444571 (+)
mrpl34 LOC107688463,LOC107585198,LOC107722555,LOC107680228 other upstream 1319804 11339735 ~ 11341111 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other downstream 203553 12867929 ~ 12874008 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other downstream 1510988 14175364 ~ 14179615 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other downstream 2081731 14746107 ~ 14753161 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other downstream 2111946 14776322 ~ 14782977 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 2577421 15241797 ~ 15249249 (+)

Expression


Co-expression Network