zgc:161973 (LOC107722582,LOC107693721,LOC107718160,LOC107585707)


Basic Information

Item Value
gene id zgc:161973
gene name LOC107722582,LOC107693721,LOC107718160,LOC107585707
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10040661 ~ 10045880 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219747.1
AGTTATCCTGTGAGGTCAGAGGCCAGTAGGCTAATCGCTAATGAGAGTGACTTCAAACGCCTTCGACTCATCATGGCTACTGGTCTTGGAGAGTTTCTCCGCACTTTAAGGCGAGGTTTTGTGAAAGACGAACAGGTCGGGGAACTTGCTCGCGCGAGAAGGCGGAAAGATAAGGACTCCCCCACGCCAGCGCCTCTGCAACGTGAAGCGTGTAAACCTCGGTCTGTGTTTGAACTTTGCGCAAAAGGCGGCCATGGAAATTACATGGGGAGATTGCCTTCCGAGATCATCTTAAAGATCCTTTCCTTCCTGGATGCCAACTCCCTGTTCAACATCAGTTTTGTCAACAAGCGGTTTCATGATCTGGCTAACAGCAATGCTTTGTGGTCTGTGTTGTATGCTTCTGAGATCGAAAAGAAAATGTGGAGACCCCGGGTAAGCATGATTAAAGAAGTCGTGAGCAGCACGATTGTGGAGGAGAAGCCTGCTGGATACTGGAAGAAACTGTTGCTCAAGGAGATGGCCGGCTACAAGGACACCGTGTGGAAAACAGAGCTAAAACACATGAACCCGCACACAGGCATGCCAGCTCTGACGGAGCATGTTCTCAGAAGGTTACACATTCAGTGGGAGATCACACTCACAAATAGGCATGGACGTGAAAGTGTCTATAAGCAGACGCACACTTTCTTCGAAGATTCATCGGTTACAGTGTGCTGGAGCCAAGCTTTCTTGCCGTTCATGTACTCTCTTAATAGCCTGCAGCTTCATGGAATAATGTGTCCAGCTTCACCAGCTCCAGGAGACAAGCCAAGGTGGCACTCTCTGATTCGCAAGACAGCTTTGCAAAGACCAGGACATTTTTCGTTCTTTGGTGCTGACAGGCTTGTGAAGGTGCTGCAGTTTGATAAAGGGATCGTCATTGGGCTCTGGCGGGGCAATTGCAGAATTGCCTTCATCATGATCAACCTGCACTTCCACAAACTGATTGAAAGAAGTCTTCTCGGGTCAAGATTTTGTCCCTACATACCTGCGGATGGCAGTGCTGTGGACCCTGATTGTAGCCGGCATGGATACACTCTGCACATTGTGCTTCACAATCCAGTTCAGCGAATCATGTATCGGCGTTTTTCCCCACTGTACACCCGTAGGgTGGCTTCACAAGGGGAATTTGTGCAGTTAATCGCCATTGATTTCGCTAATGCATCCGAGCATGTGCCTTTGGCGAAGATTAGTCTTCCATGGCAAGCAGAGGGATTGCATGGAGAAGTTGAGCGGTGCTGCATGATGACTTTGACGGTGCTGGATGAGGCTCAGCGTCCCTTCTGGTGTGTGAGttctactgtaaaaatgtacagtagaCAAAGAGTGCTGGACGTGGACTACGAAGGTGAGCAGTTCATCGTCCTTTACGAGGATGCTGATGGGAAGGTCAAAATGACCTTTGTGTGGATGGAGGAGTGTCAGCACTACTATTTGGTGCAGTTAGTTACTATGTTCCCAGCTGCCAAAGTGAAAAGGCACTTTAGTGGAGAATGTTGAAACCGTTGCTGGTGCCGAGCTGGTTTATGTTTAGAAAAGTTGAAATGATTCTGGCAGTGCTTTGAGTTGATTATTTTGGAatagtttatttgtttcttgTTCGTGTGAATTAGCATTTTGGACATTTGTAAATGTCGAGTTCCAGAGGTACTGAATTATGTATGCTTTTGTTTCCTTTGTCTGGAATTACCAGAATTTTTTCAGTACCAATTTAAATTTGGTAAATGTTGTTAgacgttttatttttggcatGTTTATCATAGTTAgtcaaataattttcaaaaggAGAATAAATAACAATGATTTGAACATCCTGTGTACTGTGTAACTGGACTCACATTGTAAACCTAAAtgatgaaattatattattgatttatttctctgtaatatatatattttataaagttCATTCAAGTGCTGGAGTGATGCTTGTCGAAGCTTTAAAAAGGACATTGAGAAACACATTCAAAACAGCTGGTATTGGTTCAGTGGGAGGCATAATGTACAATTTCTAATCAGCTGAAATTCTTCCTCATTATACCAAC

Function

NR:

description
PREDICTED: F-box only protein 15-like

GO: NA

KEGG:

id description
K10298 FBXO15; F-box protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219747.1 True 2087 mRNA 0.44 10 10040661 10045880

Neighbor

gene id symbol gene type direction distance location
kif1ab kif1ab,LOC107722550,LOC107691514,LOC107693723,LOC108432503,LOC107589853 coding downstream 7363 10008346 ~ 10033298 (-)
espnlb espnlb,LOC107691737,LOC107722507,LOC107718163,LOC107580328,LOC107589891 coding downstream 33072 9997644 ~ 10007589 (-)
rab6bb rab6bb,rab6b,LOC107589854,LOC107693724,LOC107718122,LOC108432504 coding downstream 45041 9989129 ~ 9995620 (-)
aire LOC107589913,LOC107691773,LOC107718121,LOC107579220 coding downstream 53206 9981985 ~ 9987455 (-)
amotl2b LOC107693726,LOC107722615,LOC107691578,LOC107718124,LOC107589855,LOC107564722 coding downstream 66844 9966436 ~ 9973817 (-)
bokb bokb,LOC107693720,LOC107722584 coding upstream 3521 10049401 ~ 10053443 (-)
sept2 sept2,LOC107722571,LOC107693718 coding upstream 16883 10062763 ~ 10071463 (-)
lrrc8da lrrc8d,lrrc8da,LOC107722644,LOC107585666,LOC107718115,LOC107691468,LOC107589846,LOC107722505 coding upstream 62251 10108131 ~ 10113585 (-)
hs2st1a hs2st1a,hs2st1,LOC107718112,LOC107589844,LOC107691454,LOC107722647,LOC107585633,LOC106598897 coding upstream 100702 10146582 ~ 10158021 (-)
tox tox,LOC107718108,LOC107722616,LOC107585594 coding upstream 177451 10223331 ~ 11062973 (-)
G10773 NA non-coding downstream 112824 9926105 ~ 9927837 (-)
G10708 NA non-coding downstream 291921 9748387 ~ 9748740 (-)
G10621 NA non-coding downstream 434466 9605638 ~ 9606195 (-)
G10562 NA non-coding downstream 579577 9457163 ~ 9461084 (-)
G10569 NA non-coding downstream 589735 9450560 ~ 9450926 (-)
G10812 NA non-coding upstream 938 10046818 ~ 10047373 (-)
G10869 selenof,sep15,LOC107693704,LOC107586130 non-coding upstream 112698 10158578 ~ 10160064 (-)
G10987 NA non-coding upstream 180338 10226218 ~ 10226856 (-)
G11057 NA non-coding upstream 620597 10666477 ~ 10666712 (-)
G11064 rpp40,LOC107722637,LOC107688445,LOC107689405 non-coding upstream 621762 10667642 ~ 10668967 (-)
si:ch211-267e7.3 si:ch211-267e7.3,LOC107722581,LOC107594654,LOC107718186,LOC107589917,LOC107677774,LOC107693699 other downstream 422188 9606323 ~ 9618473 (-)
plppr5a plppr5,plppr5a,LOC107722655,LOC107693754,LOC107677753,LOC107589876,LOC108441579,LOC107718169 other downstream 520880 9491563 ~ 9519781 (-)
abca4b abca4,abca4b,LOC107564534,LOC107680047,LOC107745690 other downstream 830620 9182056 ~ 9210041 (-)
zfyve9a LOC107700554,LOC107563295,LOC107677579,LOC107553256,LOC107732202 other downstream 1612757 8403327 ~ 8427904 (-)
G10213 NA other downstream 1932873 8106856 ~ 8107788 (-)
hfm1 hfm1,LOC107722645,LOC107586144 other upstream 34302 10080182 ~ 10095857 (-)
pkn2a pkn2,LOC107693716,LOC107585639,LOC107722607,LOC107718113,LOC107691687 other upstream 74093 10119973 ~ 10139585 (-)
lmo4 LOC107722609,LOC107693715,LOC107691760,LOC107589910 other upstream 95055 10140935 ~ 10143709 (-)
ca8 ca8,LOC107693711,LOC107585586,LOC107691405,LOC107589840,LOC107722503,LOC102778484 other upstream 268153 10314033 ~ 10320403 (-)
G11011 chd7,LOC107585562,LOC107722533,LOC107688517,LOC107718105,LOC107589837,LOC107689390 other upstream 330183 10376063 ~ 10378211 (-)

Expression


Co-expression Network