LOC122325295 (mex3d,LOC107552694,LOC107713414,LOC107724985,LOC107696452,LOC107596262)


Basic Information

Item Value
gene id LOC122325295
gene name mex3d,LOC107552694,LOC107713414,LOC107724985,LOC107696452,LOC107596262
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23018357 ~ 23025395 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220303.1
gagagagagagaggcgcgTGCGTctgcacacagacagacaaagacGGCGGAACGAACGGGAGAAAGCGCTGTAACACCTCTCTATCGTTCCACGCGTGAAAACGGCCAGAAAAGCAATGAGCAGACCGCGCGAGTGAGCGGCGCCGAGGCGGGACGCGTGATCCGAGCGCGCGCCGGGGGTCGATTTTGACCGCGAATGCTTTTAAAACGAGCCTCTTTCTCCAACGCCCCCCAACGATTAGCAGCTCCGCTAGCGGCTAGCCATCAGCACCAGCTCCCTCATCCTCCGCCAAACACCCGACGCGAGCGGGACGGCAGCACGCGAGGAAGCACGCTTGGTTCGTTGTCTGATGCGCACGCGGGGACGACTATGCCTAGCCCGTTGTTTCACCCTGACATCATGGATCACGAGATGGTAGTGAGCAGCACCGGCCAGTCCGGCGGGGTCACCGAGCAGGAGCCCCGGGACGAGGACCATCAGGAGGCGCTGCGCTTCGCTCTGGATCAGCTGTCGCTCATGGCCATGGAGAAGGTGGACTGTCTGGACGGGAGCTCGGCCGGGGAGAACTGCAACGGGGGAGGCGGGTACGTCGACCTGCAGATGCTCGAGCACGCCAACGGCTCCCGGGAGTCCCCCGGCTCCTGCTCGCCCTCTCCGGAGTACTACGGCTCGGGaggcggcggcggcggaggGTACCACCACATGGCCGGCCCGCACTCCTCCATCCTCGGGGAGCAGAGCTCCGTGCTCCGCAAGAGGAGCGTCAACATGACCGAGTGCGTGCCGGTGCCCACGTCAGAGCATGTGGCCGAGATCGTCGGCAGACAGGgttGCAAGATCAAAGCACTTCGTGCGAAAACTAACACGTACATCAAAACCCCCGTGAGAGGAGAAGAGCCCGTGTTCATCGTGACGGGCCGCCGCGAGGACGTGGAAATGGCCAAACGCGAGATCGTCTCGGCGGCCGAGCACTTCTCCATGATCCGCGCCTCGCGCTGCAAAGCCGGCGCGAACGGCCCCGGATCGAGCGGCTCCCTCCCCGGCCCCCCCAACCTCCCGGGGCAGACCACCATCCAGGTGCGCGTCCCCTACCGCGTCGTGGGCCTCGTCGTGGGGCCCAAAGGAGCCACGATCAAACGCATCCAGCAGCAGACGCACACGTACATCGTGACGCCCAGCCGCGAGAAGGACCCCGTGTTCGAGGTCACCGGCATGCCGGAGAACGTGGACCGCGCGCGAGAAGAGATCGAAACGCACATCACGCTTCGCACCGGCGCCTTCGTCGACCTCCAAGGCGATAACGACTTCCACAGCAACGGGACCGATGTGAGTTTAGAGGGACTCGGGTCGCTCGGTCTGGCCAGCGCGCTTTGGTCGCGCGCGACTCACTCGGCGCCGCCCCCGCCGCCGCCGCCTCCTCCTCCGCCGCAGATGCACCATTCGTCGCGCAAAATGTCGTCCGAATCGTTCTCCGCGAGCCGCCGGCCGACGGACGGCGGAGGAAGCCCGACCAGCCCGTTCAGCACGAGCAGCGCCGGAGGGAGCTTCTCATTCGCGGGCGACTCGACTCCGAACTTGCCGGCGTCGGCGTCCGAGGATTTGGGTTTCGAATTCAGCGCCGCCAATATCTGGGCTCCGTTCGCGAACGGCGCCAAGCAGCAGACGCAGGCGGTCCGGCGCAACAGCAGCGGGCTCAGCGGAGGAGCCGTGACCCCGCGCCTTTCCCCGGACCCGGACCACCCGCTCGCCCGCCGGGCCCAGAGCGACCCGCTCAGCACGCTCTCCTGGCTCCAGACGGGCGCCGGAAGCTCGTTCTCGGGCcggagcagcagcagcggcgggAGCAGCACCGGGTACTCGTCCTGCTCGGCGTCGTCGCTCCCCGGCGGCTCGCCCACGGATTCGGAAGGCGGCGGGAGCGGAGCGGGGATCGCGTCCACCATGTTGGGGCGCCTCAAAGCCGGCGGCCTGGCTGGGATGGTGTCGCGGGATTGTTTCGTGTGCTGCGAGAGCGAGGTGACCGCGGCGCTCGTCCCGTGCGGCCACAACCTCTTCTGCATGGATTGCGCCGGGCAGATCTGCCAGTCGCAGGATCCCGAGTGTCCCGTTTGCCACACTCCCGCCACGCAGTGCATCCGGATCTTCTCTTAAACGCAGACTGCCTTGAGTAACTATTAGATATGACACTATTCCCAAttgacagtaataataataataacaataacaacgaCAGTGACTTAATTACCCACTCAAGTACTTGTCGGACTGCGTCTTATCTTTAGCTGTTCATGTTCggtgggttgtttttttttttttttccattcatgcTTCCGACTTTTTCTACTCGCAGATTTTTCGACTTTTACGCTGCACTTTTTTCTAACGCACCCCGTGTTTGCCGATGCAGtcgtttttaaattattgttttcttttaaaaacaaaaaaacaaaaaaaaaaaaacgaacgcGAAAGCTGCGCTCGTTTAGACCAAAACACGAGAGATATTCCCGTTTTTTATTATCGAACGCTTAATATTTATACGCGCCGCGAGGCCGTGCTAGTGGACGTAGGATCAGAGATAGCTAGAATAGTTCATGTTACGAATATCGTTACCGTGCATTTTCTCGTTTCGCCACACTACCTTAAAACGCTCACGTGTCGGTTCGTTCCCGCACTCCAGAAACAGGGTCGCTAGTATTTaacgtgtttttttaaatctgttacGACTTTTTTCGAATCGGGAACGCATGACGAATCGTCTTTCGAATGTCCTAGTCGTGAATGTCCCGGAAATGTCTTTCGCTCGGAGTTCTGCGTCCGTCTTCCGGCCGTCGCGAGAGCGTTTCGTTTACGATCCCCCCCCCCCCCAGACGAGTTTTAACGCGACAAGCCATGCTTTCACACTTCAAAGGGCTTCCGGTTACACACTACACTTTCAGGTCGTCCTGACAAACGGGATGCTAGTCCGCGTGGCAGCTAAATCACCAGGGCTTCCGTACGTTTTAGCGACGCGCGAACGCGAGGGAGAATGCGTTTCGGTTTGTACAGGTTTCTTTTAGATGCGCTCTTAGAGGCTTTTCTTTCGCCGTGTCGGATGTGTATCGAGCTAACGGTGCCTTGGTGGTGAAAACTCGCCGCCGGGAACGAAGATTGTGACGTAACTTCCCTCCGCTCTTCCGGTTTTAGTGATTTGTACAGAAGAGAGCCGTGTCGAATCTGAGCCGCTCGTTTTCTtcttgttgtttaaaaaaaaaaagaagcagcgCAGCTGGTTGAAAGGTACAAGAAGCTAGTCGTTTTATCGGTTGCGTGCGCGTATGTGACGTTTTTTGGTATCGGCGATGAAGGTCACGTGACTTAGTGAAGAATTGGCCTGAAGTCGAACGGTTTCCTTTttcgttatttttattttatttttttcctcgaACAGGGTTCGCTGGGGACGATCTCAGgcggggtgtttttttttttttttgcatcggAACGACGTCAGACGCTGTTTTCCCATGATTCATTGGGGCCCTAAACCCGCTCCGCTTTTACTTTCCGCTTCGATTCGTTTTCGTACGCAGAACCAAAAGCGATTTCAATAACCGGATTTCAGGCCTAACTGTAAATATCCTGAACTACAATCATTGGGATTCGTTTTCAGAAGGTTCATGTAGTTTTTAAAACGCGTATCATTATTTGTAAGTTAAACTCTCTGCATGTCTTGAAGCCGTGAGGCGTTAGCTAAtactttttctaaaaatgaaaagacaaaaaaactttttttacacatttttatttttacaatttatttgcTTACCTTGACGTAAATATCCCAGATTATAATGTGACCCTTTTATTACAGcaaatttatctttattttccatatttctGTTTCCTGTGTACAACATATAGGCAATTTataacaaaatgagaaaaaattattgaagaaatttaaaattgaaatatattttatttgaaagtttATGGACCTTTTAACCGTGAGCTGGAACAATTGTATACACGTATAATTTGAGCTGACTTGACGGTTATAAGAAATGTAtcaagagttttattttttatgcttctttaataaaatcttgtttttgttttcgtttttgtactgtaaaacaatAA

Function

symbol description
mex3d Enables mRNA 3'-UTR AU-rich region binding activity. Located in nucleus and perinuclear region of cytoplasm.

NR:

description
PREDICTED: RNA-binding protein MEX3B-like

GO: NA

KEGG:

id description
K15686 MEX3, RKHD; RNA-binding protein MEX3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220303.1 True 4126 mRNA 0.54 3 23018357 23025395

Neighbor

gene id symbol gene type direction distance location
mbd3a mbd3,LOC107713415,LOC107696467,LOC107552695,LOC108427158,LOC107724987 coding upstream 1877 23005897 ~ 23016480 (+)
tcf3a LOC107671808,LOC107696481,LOC107724980,LOC107552693 coding upstream 19841 22958986 ~ 22998516 (+)
map2k2b map2k2b,LOC107671813,LOC107726325,LOC107696522,LOC108427153 coding upstream 71499 22938787 ~ 22946858 (+)
pias4b NA coding upstream 80529 22926313 ~ 22937828 (+)
LOC122328301 LOC107696585,LOC107552683,LOC107724989,LOC107549819,LOC107671817,LOC100151059,LOC108427150 coding upstream 147385 22833068 ~ 22870972 (+)
LOC122327352 LOC107572994,LOC107569272 coding downstream 224797 23250192 ~ 23260474 (+)
wu:fb63a08 LOC107749217,LOC107572082,LOC107660374 coding downstream 399299 23424694 ~ 23442701 (+)
scg2b LOC107552496,LOC107552495,LOC107660152,LOC107738796 coding downstream 505375 23530770 ~ 23533357 (+)
mbnl1 mbnl1,LOC107724811,LOC107573627,LOC107745615,LOC107679403,LOC107567699 coding downstream 538369 23563764 ~ 23624866 (+)
LOC122354760 NA coding downstream 599612 23625007 ~ 23630373 (+)
G14589 NA non-coding upstream 138892 22847913 ~ 22879465 (+)
LOC122328317 NA non-coding upstream 188812 22813266 ~ 22829545 (+)
LOC122357472 NA non-coding upstream 215884 22786721 ~ 22802473 (+)
G14578 NA non-coding upstream 232344 22742427 ~ 22786013 (+)
G14605 NA non-coding downstream 1385 23026780 ~ 23028239 (+)
G14607 NA non-coding downstream 3772 23029167 ~ 23029879 (+)
G14611 NA non-coding downstream 21238 23046633 ~ 23049972 (+)
G14772 NA non-coding downstream 132703 23158098 ~ 23179131 (+)
G14778 NA non-coding downstream 154050 23179445 ~ 23179755 (+)
LOC122324535 NA other upstream 13103 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 323027 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 344082 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 532702 22461916 ~ 22485655 (+)
G14471 NA other upstream 1156915 21860891 ~ 21861442 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 519711 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 910526 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 1020290 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 1034017 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 1058443 24083838 ~ 24096897 (+)

Expression


Co-expression Network