eif2b3 (eif2b3,LOC107722074,LOC107599900,LOC107700990,LOC107720854,LOC107558289)


Basic Information

Item Value
gene id eif2b3
gene name eif2b3,LOC107722074,LOC107599900,LOC107700990,LOC107720854,LOC107558289
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 15803479 ~ 15833173 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220425.1
CGCACGAATCATTTACAAGTAGCGGTCTTATGTCATCTCGAAATATCTGGTCAGTTATTGTAGACTACTCCAGATAAAGCATTTCGAtgggttttatttgtttgtattctTTGTGTTTAAATAGATTGTACAGGTTTTAGCAGTAATAGTTAAAGATAGCGAGTCTAGTGACAGACTCACATGAGCGTCTGCTACAGTGCTGCGGATTTTCACGTGCACGTACTCAATACTTTACAAATCAGAAACATTTGGATTAGCAATACAGGTGTTAGGGATGGAGCTGCAGGCGGTGCTGATGGCAGCAGGTGGAGGTTCCAGGATGATGGATCTCACCTATAACACCCCCAAACCTCTGCTGCCTGTGGGCAACAGACCCCTCATCTGGTACCCCCTCAACCTCCTGGAGAGAGTGGGCTTTGAAGAGGTGATTGTCATAACCACTAAAGAGGTTCAGAAGGCCCTGAGCACTGATCAGCGCCTGAAGTCAGATGTAAAGATGAGGTTGGATGTTGTATGTATTCAGGAGGAAGCTGACATGGGCACCGCAGATGCCCTTCGACACATACAGCAGAAGATCAAGACAGACATCTTGGTGGTGAGCTGTGATTTGATAACCGATGTGGCTCTACATGAGGTTGTGGACCTCTTTCGTGCACACAACGCCACCCTGTCGATGCTCATGAGCAAAGTGCATGAATTCACAGAGACTGTCCCTGGCCAAAAGGGCAAGAAGAAAGCAGGAGAGCAGCGGGACTTCGTAGGCGTGGATGTCACGGGAAAGAGGCTTCTGTTCATGGCCAATGAGGCAGACCTGGAGGAAGGCCTTATTCTCCGGAAGTCAATCATGCGCAAACATCCCAGAATGCTCATCAAGACCGGCCTGCTGGATGCCCACCTGTACTGCCTGAAGAGATCTGTGGTCGATTTCCTAGTACATAACAAGTCTGTCACCTCAATCAGGGGGGAATTAGTGCCGTATTTAGTGCGCAAGCAATTCTCCAAGTCTTTAAACTCCAAAGACGCAACAGAGGATACAGAAAAGAATCAAAAACAACAGGATGCTCACCACAATTTGGAGCTCCTCAGCACTAGCAAAGATGAGGCGCTGCTCCAGCTTGCCCGGGAGAGGTCATGTTGGAACGATCATCGTGGAGACATGAGCGAGGCCTACCATGGTGGAAAGCTACGTTGCTATGTTCACATCATGGAAGATGGCATGTGTTACCGCGTCAACACGCTTGCCGCTTATATAGAGGCCAATCGTGTGGTTCCAAAGCTGTTTGAGGACCCTCCAATACATCCGAGCGCTGCTGTCTCAGAACGCTCTTTGatTGGAAGTGACAGCATTATTGGGCCATCTTGTCAGATATCAGACAAGACATCCATCAAGCGTTCAAATGTTGGCACATCATCCGTAATCAAGGAGAAGGTGAAGATCACCAACTCCATCATCATGAATGGAGTCACTATTGAAGAAGGGTGTAACATTCAAGGCAGCGTGATCTGCAACAACGCAGTGATTGGACGTGGAGCCGACATGAAGTACTGTCTCGTGGGGAGCGGCCAGCGCGTAGAGCCAGAGGGTGAGAACGCTGCAGgttacactacacacacacacacacacacacacacacaaaaacacacactctacacTTCTGTAGTTCCGCAGTGTTCGTATTAAATCCAgccttttgtgtttgtgtttatgtgtgcacCCTCACGCCCATGTCTGCCTTTTCGTGTGTGTGatcttgtgtgtgtatgtgcgttttaatctgttttaataGCGTATTAAAACCTAAGCTTGTGTGTACAATTgagctttattatttaatatgcttAATCCTTGCGGTCTTAGATCACCGCGAGGTTTGTGTGCGTCTATTTGCGTGTGTGTGGCTTCAGGCTCTTGTATTCCGGGTGGTCCGCGCCTGGTCTCTAACCTCTCCATCAATGACAGTGCCTTAAGGCGGCCCTAAGATGTCCAGAGGCTGCACAGTCTAATTGACTGAACAACAGGGTGTTGCTGCCTCGACTGACCCACCAGACCCCCCCACCCCACCGTAACTTTTCTCCGTCTCCACCCCCCACCTCTCCATCATCACTCTCGAGCTGGACTCGATTAGTTGGCCATAACCTCTAAAAATGCTTAGGCTTATTGAAGTGCTCCCAGAAATCCCAAATTACAAGCTAGACCCCCTGTACTTCCCCCGACGCACACCCGCCCTCCGGCTTCGGCGCTTTAAGCGCAGCGCGAAACCACGATTCAGAGTTATCCCAGAAAAACCCGGAGCAGAGGTTAATGTAacctattatttaaaaagcattgcTTATAATAACTGCAATAAATCCCCTTCGGTAGCCTTGAGGTTGACACTCGCTCCTTTGTACGCAGATGCACAAATTTAATGTCAAGTCAAAGAGAGAAATTAAGTTCATTAAAGAGTCGCTGCTCGGTTTTGATGTGTCTACCCTCCTGAAATAAAAAGGCTGATTTTTCCTTTGAGGTTGTGCTAGAAAATTGAAAGATTCCCTCTGATGGTTATGTAGCTGAGTGTAGCTTAAATGTAATGGTGGATAAGAATTTGTGCACCATTATAGAGGGTAATGTGACTTGAGAGACTAAAGAGAGTAAGAGAGATGATGTTTTTATGGATGCATGATTTATTGGTCACAACATATCAGACGGTATCTGGCTGACTAGGCCAATACTGGAAGCAGACAGTTATGCTTTTCATTCAATTTAAACAATGGGATAAAAAAGTGCTAACTGTCAAGAAACATCTGTCACATGGAAAATGCTTGTATACTAATAGTGTAACAATCAAAAAAGtcttgaattatatatattatgactattttatttccttgggttttattaacatcttatatgattttattcattttacactTAGTCAAGTTACTCatatatttgacaaaatatatatatgatgaaagAGTAAAcagctgcttaacatttttgcagAAACATCTGTTTGAAGTTAAAATCTTTATTGTAGACGTTTTTGCTGTtactttttatctatctatctatctatctatctatctatctatctatctatctatcgtttcTTGGGAgaaatttttccatttttgtcgCATCAATTTGACACTATTTGAAGATGTATGAATTAGACGTATGAAATACACTACAAACTGCTATATGCTGTCAGAGTTGGATTCGTCTATTTCTTTGGCCtaatcaaaacaaagcaaaaaagatAACAATTGGTCAGCATCCGGacatattttccattttcttctGCTAGTTTCCTTTTGATGCCTGGTTTTTGAGTAAAACgtgtatacatttaatttaaaatataagcgTGTATTGTCGGCTGTAGCATAGAATATATGGGAAAAATGTCAATATTGGCCCCAATCGGCGCATGCCAAGATTAGTGTTCATTTGCAGTTTATATATTACCCCACGTTGCACTGTGGTACACTTGTAATCTCTTTAAACAGCTGCTGAGTGATTAGACAACTCTTAGTAGACTTTATAGCCGTTCCACTATGGTGGTCTAATACAGTcaactccacacacactctctttctccgTCGTCTCAGTGTCTTTCTCTCATTCACTCTCACTCTTTCTATTCCCAGCTTGTTTACTGCTACTGGCTGTTGGCGTGTGTTGGCCACAAAGGAGTGATAGACATCTCATAAACTCTAGCCGAATGCTTTCTCTATAAGGTTCTGTGTTCCCAGCATCCTTGTCCTCAGGGGATTGAGTGTGTTGGGTTATGGCTGCTAAAAGCGTCCCAGGCCCTGGAGACGGGGTTGTACGTCCAGGACCACCCGGCCTGCCGCTCGGCACGCTGTTGTAAGGTGCAGTAGTTTTGCAGGTGTTTCGGGAGGCTGATGACATGTACCTTTCCTCAGACTGTTTAGACTCTTGTTCCAGCCTTCTCTCTTTGTGTTCgtccctctcgctctctttctctctctctctctctctctctctctctctctctctctctctggcatAGCACGCTCTATTTGTCTTTCCCCAAACTCAGAACACAAAAACAGTCTTTTGTGCGGATTCCTTCACACTAAAATATGTCTTTATGTGGATCATTAATCTCGCTCTCAAACGTTTAGTTTGGAGTGGTCACATTCGGCAAGAGGATATCATCCTTCCTAAGCGAGTGTGTATAAGCCTGACACGTTTGTAAACTGTTTGCTTGTCACTGCGTGATGGAACGGCCCACAAAGGTAAACTccagatttaataaataaaagggcTTTCCTGTCTTTGAGTTCTAGAAACGGTCATTTCCACTTAAGTGACTCATTTGAGTGTTGAATGCTAACAGAACGCACAGCTCACGTCCTTTGAGGCACGACAGATGCCTGACAGCTCTTTCTGAGAGTCTTGTTTTCTCTCCTCACAGCTGAAAGAACCAATGAGGTCATCGTTGGATCAGACCAACTCATGGAGATCTAGAACCGTGTTGGAGATGGATCGCAGACCCCGAGACGCCCGCATCAACCTGCTTCCATGTGCATAACCCTGCACAGGATCCATTTTTTATGTGtccaaataaaaatggatttattta
>XM_043220432.1
CGCACGAATCATTTACAAGTAGCGGTCTTATGTCATCTCGAAATATCTGGTCAGTTATTGTAGACTACTCCAGATAAAGCATTTCGAtgggttttatttgtttgtattctTTGTGTTTAAATAGATTGTACAGGTTTTAGCAGTAATAGTTAAAGATAGCGAGTCTAGTGACAGACTCACATGAGCGTCTGCTACAGTGCTGCGGATTTTCACGTGCACGTACTCAATACTTTACAAATCAGAAACATTTGGATTAGCAATACAGGTGTTAGGGATGGAGCTGCAGGCGGTGCTGATGGCAGCAGGTGGAGGTTCCAGGATGATGGATCTCACCTATAACACCCCCAAACCTCTGCTGCCTGTGGGCAACAGACCCCTCATCTGGTACCCCCTCAACCTCCTGGAGAGAGTGGGCTTTGAAGAGGTGATTGTCATAACCACTAAAGAGGTTCAGAAGGCCCTGAGCACTGATCAGCGCCTGAAGTCAGATGTAAAGATGAGGTTGGATGTTGTATGTATTCAGGAGGAAGCTGACATGGGCACCGCAGATGCCCTTCGACACATACAGCAGAAGATCAAGACAGACATCTTGGTGGTGAGCTGTGATTTGATAACCGATGTGGCTCTACATGAGGTTGTGGACCTCTTTCGTGCACACAACGCCACCCTGTCGATGCTCATGAGCAAAGTGCATGAATTCACAGAGACTGTCCCTGGCCAAAAGGGCAAGAAGAAAGCAGGAGAGCAGCGGGACTTCGTAGGCGTGGATGTCACGGGAAAGAGGCTTCTGTTCATGGCCAATGAGGCAGACCTGGAGGAAGGCCTTATTCTCCGGAAGTCAATCATGCGCAAACATCCCAGAATGCTCATCAAGACCGGCCTGCTGGATGCCCACCTGTACTGCCTGAAGAGATCTGTGGTCGATTTCCTAGTACATAACAAGTCTGTCACCTCAATCAGGGGGGAATTAGTGCCGTATTTAGTGCGCAAGCAATTCTCCAAGTCTTTAAACTCCAAAGACGCAACAGAGGATACAGAAAAGAATCAAAAACAACAGGATGCTCACCACAATTTGGAGCTCCTCAGCACTAGCAAAGATGAGGCGCTGCTCCAGCTTGCCCGGGAGAGGTCATGTTGGAACGATCATCGTGGAGACATGAGCGAGGCCTACCATGGTGGAAAGCTACGTTGCTATGTTCACATCATGGAAGATGGCATGTGTTACCGCGTCAACACGCTTGCCGCTTATATAGAGGCCAATCGTGTGGTTCCAAAGCTGTTTGAGGACCCTCCAATACATCCGAGCGCTGCTGTCTCAGAACGCTCTTTGatTGGAAGTGACAGCATTATTGGGCCATCTTGTCAGATATCAGACAAGACATCCATCAAGCGTTCAAATGTTGGCACATCATCCGTAATCAAGGAGAAGGTGAAGATCACCAACTCCATCATCATGAATGGAGTCACTATTGAAGAAGGGTGTAACATTCAAGGCAGCGTGATCTGCAACAACGCAGTGATTGGACGTGGAGCCGACATGAAGTACTGTCTCGTGGGGAGCGGCCAGCGCGTAGAGCCAGAGGCTGAAAGAACCAATGAGGTCATCGTTGGATCAGACCAACTCATGGAGATCTAGAACCGTGTTGGAGATGGATCGCAGACCCCGAGACGCCCGCATCAACCTGCTTCCATGTGCATAACCCTGCACAGGATCCATTTTTTATGTGtccaaataaaaatggatttattta

Function

symbol description
eif2b3 Predicted to enable guanyl-nucleotide exchange factor activity and translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to act upstream of or within translational initiation. Predicted to be part of eukaryotic translation initiation factor 2B complex and guanyl-nucleotide exchange factor complex. Is expressed in eye and gut. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter. Orthologous to human EIF2B3 (eukaryotic translation initiation factor 2B subunit gamma).

NR:

description
translation initiation factor eIF-2B subunit gamma

GO:

id name namespace
GO:0051716 cellular response to stimulus biological_process
GO:0006413 translational initiation biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0014003 oligodendrocyte development biological_process
GO:0005851 eukaryotic translation initiation factor 2B complex cellular_component
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0016779 nucleotidyltransferase activity molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03241 EIF2B3; translation initiation factor eIF-2B subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220425.1 True 4595 mRNA 0.44 11 15803479 15833173
XM_043220432.1 False 1751 mRNA 0.48 12 15803479 15833173

Neighbor

gene id symbol gene type direction distance location
ptch2 ptch2,LOC107557169,LOC107700991,LOC107720855,LOC107599897,LOC107722076,LOC107657459 coding downstream 7182 15769765 ~ 15796297 (-)
atp6v0b atp6v0b,LOC102788333 coding downstream 121453 15676203 ~ 15682026 (-)
b4galt2 b4galt2,LOC107657457,LOC107599894,LOC107700994,LOC107557142 coding downstream 128605 15585517 ~ 15674874 (-)
prpf4ba LOC107733882,LOC107599886,LOC107657448 coding downstream 547572 15248085 ~ 15255907 (-)
bfsp2 bfsp2,LOC107733884,LOC107730799,LOC107557028 coding downstream 573811 15223956 ~ 15229668 (-)
cenpl cenpl,LOC107720853,LOC107599910,LOC107657424,LOC107722063,LOC107700989,LOC107557192 coding upstream 23066 15856239 ~ 15860091 (-)
brinp2 brinp2,LOC107658350,LOC107562711,LOC107722070,LOC107720848,LOC107700985 coding upstream 115239 15948412 ~ 16024650 (-)
tnn tnn,tnw,LOC107722078,LOC107658358,LOC107678933,LOC107726927 coding upstream 624584 16457757 ~ 16485204 (-)
nmnat2 nmnat2,LOC107658365,LOC107563562,LOC107678925,LOC107557267 coding upstream 855452 16688625 ~ 16698623 (-)
LOC122356645 LOC107709317 coding upstream 1014518 16847691 ~ 16849363 (-)
LOC122356097 NA non-coding downstream 49057 15718628 ~ 15754422 (-)
LOC122359617 NA non-coding downstream 249875 15547035 ~ 15553604 (-)
G12313 ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 non-coding downstream 562653 15237959 ~ 15240826 (-)
G12308 NA non-coding downstream 580024 15223211 ~ 15223455 (-)
G12199 NA non-coding downstream 868454 14934769 ~ 14935025 (-)
G12567 NA non-coding upstream 465999 16299172 ~ 16299744 (-)
G12585 NA non-coding upstream 611790 16444963 ~ 16445224 (-)
G12619 LOC107722060,LOC107563589,LOC107658360,LOC107559063,LOC107678928,LOC107726916 non-coding upstream 664530 16497703 ~ 16498417 (-)
G12614 plk3,LOC107563563,LOC107722069,LOC107658359,LOC107557223 non-coding upstream 669869 16503042 ~ 16504056 (-)
G12620 NA non-coding upstream 709310 16542483 ~ 16542771 (-)
ccdc24 ccdc24,LOC107657456,LOC107599905 other downstream 223773 15559663 ~ 15579706 (-)
smarcd3a smarcd3a,smarcd3,LOC107657439,LOC107599876,LOC107709803,LOC107556978,LOC107718026,LOC103039772 other downstream 649490 15133971 ~ 15153989 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other downstream 675988 15120587 ~ 15127491 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other downstream 1193213 14578995 ~ 14610266 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other downstream 2239114 13553773 ~ 13564365 (-)
pappa2 pappa2,LOC107722077,LOC107568983,LOC107678935,LOC107726923,LOC107658303,LOC107558342 other upstream 391550 16224723 ~ 16268835 (-)
LOC122362257 LOC107658348,LOC107563587,LOC107678922,LOC107726920,LOC107722065,LOC107559085 other upstream 649987 16483160 ~ 16512019 (-)
G12658 lamc1,LOC107678923,LOC107726890,LOC107557259,LOC107722047 other upstream 838403 16671576 ~ 16673710 (-)
G12839 NA other upstream 973088 16806261 ~ 16806738 (-)
G12841 NA other upstream 989452 16822625 ~ 16823073 (-)

Expression


Co-expression Network