LOC122325496 (LOC107698467,LOC107713624,LOC107600258)


Basic Information

Item Value
gene id LOC122325496
gene name LOC107698467,LOC107713624,LOC107600258
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24549295 ~ 24551538 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220538.1
ACATGTTTCTGCATCAGCAGGTCACGCGACTGACAGACAACGCGTTTCACTTCTTTAAACCCAGCGCCGGTCACAGCATCGAGAACTGCACTGCTCACAGACCCTCAGAAGAAAAAGCTATAAATCATGATTAAATACAACTGCAGTCCAGAGCTGAATCGCACAGACGTGGCGCTCGGTCTGTTCGAACGCGTGGCCTACACGCCTGTCTTCGTAGTGGGCCTTTTCTTCAACGTCACGGCTCTGTGCGTCTTCTGTCGTCTCAAGCGCTGGACAGACACGCACATCTACATGTTCAATCTACTGCTGGCCGATTTCCTATCCATTATTTTCCTGCCCTTCAGGATACTGGAAGCCTTTTGCCCGATGACACCCAGCGCATTCTGCACGTTCTTGCTTTGCACCCAGTACTCCAACATGTACAGCAGCATCTTCACCATTACAGCTATCAGCGTTCACCGGTTTATAGCCGTCAGGTTTCCGTTTCTGATGAAAACGCTGGCCTCCAAAAGCAAGGCGATCGCCACTTCGAAGTGCGTCTTTATTTGGACGGTCGTAGTGGTCGTATGCGCTTGTAACTCTAAGGACCTCAACCAAGAACTATTAGAGACGTGCTATGACCGGAAACTGACAAAAAAGCTAGAACGACACTTTTTCTTGCTTTTGGAGATTTTAGGTTATGTTATCCCAGTGCTCGTCGTCGTATTTTGCTCCACACGAACCATCTACGTCCTGATCGGATCCCTTAAGCATGTCCAAGGGAGGGACAAAGCGGAAAGGAAAAACATAGCTGCCATCATCACGGCGAACATGTTCACATTCATTGTTTGCTTCACGCCCGTTCATATCGGTCTTTTGTTGCAATATGTAATATTAGATGATTCATGGAAAGACTTTGTGCATGTGTTTCTTGATGTCACCGAGTGGATCGCTACCACCAACTGCTGTCTGGATTCGATTGGCTATTACTTTTTGCTGAAAAGAGTTAATAAAAGGGAAAAGCGTTCATACTGAACGTAAAAAGTTATCTTGAGTATAAATTGATCTAGATTAGATTAAGGAAAATCTTTGTCATATGTGTGGAACAATATAGCCTAATAAAGCTTagtagtaaaatataatatataaatacatatgtaaaatatatgtaaaatataag

Function

NR:

description
PREDICTED: G-protein coupled receptor 55-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220538.1 True 1159 mRNA 0.44 2 24549295 24551538

Neighbor

gene id symbol gene type direction distance location
LOC122327453 NA coding upstream 431661 24116742 ~ 24117634 (+)
LOC122327448 NA coding upstream 434188 24112777 ~ 24115107 (+)
LOC122326195 NA coding upstream 437612 24109663 ~ 24111683 (+)
LOC122324938 NA coding upstream 467791 24079156 ~ 24081504 (+)
LOC122327432 LOC107549368 coding upstream 476091 24071209 ~ 24073204 (+)
LOC122327477 LOC107653347,LOC107731078,LOC107585662,LOC107568542,LOC107675751 coding downstream 68449 24619987 ~ 24626282 (+)
viml viml,LOC107656138,LOC107600213,LOC107599242,LOC107757824 coding downstream 291240 24842778 ~ 24849115 (+)
pde1cb pde1cb,pde1c,LOC107713666,LOC108280739,LOC108433077,LOC107712805,LOC107663536,LOC107599240,LOC107757825 coding downstream 299225 24850763 ~ 24919804 (+)
neurod6b neurod6b,LOC107713643,LOC107656134,LOC107599290,LOC107663516,LOC107757826,LOC107600270 coding downstream 380044 24931582 ~ 24934535 (+)
fyco1b LOC107655871,LOC107663534,LOC107757827,LOC107599271,LOC107600249,LOC107713630 coding downstream 412488 24964026 ~ 24978745 (+)
G15069 NA non-coding upstream 36234 24507886 ~ 24513061 (+)
G15066 rorcb,LOC107757806,LOC107662989 non-coding upstream 42897 24502752 ~ 24506398 (+)
G15067 LOC107698501,LOC107600225,LOC107713654,LOC107757806,LOC107662989,LOC108280913 non-coding upstream 47979 24500239 ~ 24501316 (+)
LOC122326923 NA non-coding upstream 113640 24427986 ~ 24435655 (+)
G15059 NA non-coding upstream 127283 24255205 ~ 24422012 (+)
G15165 NA non-coding downstream 237347 24788885 ~ 24840993 (+)
G15169 NA non-coding downstream 245275 24796813 ~ 24797564 (+)
G15189 LOC107757823 non-coding downstream 261761 24813299 ~ 24816430 (+)
G15225 NA non-coding downstream 554165 25105703 ~ 25210816 (+)
G15236 LOC107558270,LOC107558271,LOC107713634,LOC107655863,LOC107757833 non-coding downstream 559723 25111261 ~ 25115138 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other upstream 49610 24493438 ~ 24499685 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other upstream 299304 24241872 ~ 24249991 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 452398 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 487093 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 500830 24045685 ~ 24048465 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 136018 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 619198 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 670606 25222144 ~ 25236609 (+)
LOC122327519 hecw1b,hecw1,LOC107600217,LOC107662981,LOC108280656,LOC107576258,LOC107656133 other downstream 842618 25394156 ~ 25406903 (+)
LOC122362387 LOC107722547,LOC107680242,LOC107550619,LOC107688474,LOC107709878 other downstream 940722 25492260 ~ 25516180 (+)

Expression


Co-expression Network