G449


Basic Information

Item Value
gene id G449
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1362043 ~ 1363359 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU545
AGTCACATGGAAGGCACTGCATTACAGCATATTTTGCATAAAGGACAACCTTTTTATTTTTATGAAAGAAACTGATTAAATTAATTAAGCCAAATAAAAAATACAGTGACTTTTTTCTGACTTCCTATTCAATCTGCAACATCAAACCATCTTTACATCCACAATAATCATTTCAATGATAAAAATTATCTATATAATAAAAATCATGTAAAAAAAACAATTTTGTTAAGGTGTCATTGCATTTTAAATCTTAACACTATGCATAAAAACAGTTTAACTACAACATAAAAAAATCTGACAGTAATCCAATACATTGGTCATAGTTCTCCAAAACATTAAGAGAGAAATAATTAATTGTCCAGAGATTTTTTTCAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAAAACTTAAGATACACATGTACATGTTTTTAGGTTATTTAAACCTCAATACATTCCCTGGGTTAATGCCCTTATTAAAAAGAACATATAATCAAGCATTATCAAAAAAGGCAGTTAAAGATTTGTTTCTCTCATTTAAGAATTCAAAAGCAAAGCACCATGTAATTTGAAGTCATTCTTGTCCAGCATCATCACAAATACCCTTTAAGACAGGTTATTTTTTTTACCTCTTGCTGTATATACAGTACATACTATAAATAGTATATATGACTACACAGGATTTAACCTAAAAAGAGCCCAGTGCTATACAGTTCTTACAAGTTTCTGAAATATTATTGCTATAAAAACAATCTTTTTCTTTTTTGGGACATTCCTTTTTAGAGCTGTTTCCTGAGTACAGATTAACCATAGTACTAAACTAAATTGTACTGACAGTGCAAGTTAGTTCATAACTAGACGAATCTATGACAAAGAAACAGATGCAATTCATTTGCTCCCATTTTCCAGTTCACTCTATGTGTATAATGTACAATGTGTTAATAATGCGTGCAAAAATCTACATTTCATATTCTTGGTGCAAGATATTCTTTCAGATGTCCCATGCTCTTATTGGATTATAATGCCATACTTCATAGTTTTTTGTTTCTCTGAGGTCTCTGTAATAAATAGACATAAAAAAAAAGCAAATGCAACATATGGCACAGGAGTAGTGGAACTGCACACCCTACAAACACTGAAGTTAAAAGGTATTTTGTGTTCAAGTCAATAAGGCGGGCATCTCTTTGAGTGAGGCAGTTTGATTGGTCACTCTAAAGGACATCTTAAAGGTGCAGAGCTGATCAATGTAGCGCTCCAGTAAGCTTCACTGCAACTCAGCTTTTTCCAGAAACTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU545 True 1317 lncRNA 0.50 1 1362043 1363359

Neighbor

gene id symbol gene type direction distance location
CI01000000_01347674_01352321 NA coding upstream 8815 1347674 ~ 1353228 (+)
CI01000000_01209256_01229839 NA coding upstream 131684 1208489 ~ 1230359 (+)
CI01000000_01196208_01208022 CLK4, CLK4A coding upstream 153686 1196208 ~ 1208357 (+)
CI01000000_01176488_01180221 4EB3L, 4EBP, EIF4EBP3, EIF4EBP3L coding upstream 181774 1176450 ~ 1180269 (+)
CI01000000_01149697_01163047 RUFY1 coding upstream 198063 1149697 ~ 1163980 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding downstream 42247 1405606 ~ 1410503 (+)
CI01000000_01459294_01485147 SLC44A1 coding downstream 95935 1459294 ~ 1485311 (+)
CI01000000_01511690_01517631 IKBKAP coding downstream 148331 1511690 ~ 1517719 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding downstream 317148 1680507 ~ 1691194 (+)
CI01000000_01848610_01851296 NA coding downstream 484184 1847543 ~ 1851898 (+)
G499 NA non-coding upstream 57986 1303857 ~ 1304057 (+)
G483 NA non-coding upstream 106740 1255040 ~ 1255303 (+)
G480 NA non-coding upstream 108974 1252796 ~ 1253069 (+)
G479 NA non-coding upstream 113230 1248550 ~ 1248813 (+)
G473 NA non-coding upstream 139526 1222293 ~ 1222517 (+)
G502 NA non-coding downstream 3768 1367127 ~ 1367360 (+)
G506 NA non-coding downstream 4976 1368335 ~ 1368897 (+)
G505 NA non-coding downstream 8760 1372119 ~ 1374608 (+)
G504 NA non-coding downstream 12654 1376013 ~ 1376769 (+)
G507 NA non-coding downstream 13624 1376983 ~ 1377239 (+)
G350 NA other upstream 685106 671842 ~ 676937 (+)
G252 NA other upstream 854971 503209 ~ 507072 (+)
G435 NA other downstream 61762 1425121 ~ 1432854 (+)
G579 NA other downstream 452094 1767917 ~ 1908808 (+)
G2774 NA other downstream 3090419 4453778 ~ 4454232 (+)
G2850 NA other downstream 3362627 4725986 ~ 4726482 (+)
G6811 NA other downstream 8841472 10204831 ~ 10321679 (+)

Expression


Co-expression Network