LOC122326186


Basic Information

Item Value
gene id LOC122326186
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 19618385 ~ 19619892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220909.1
TCTGGCCAGACGACGCGATCAAGATGATGCTGATTTTCACAGCTTGTGTTTTTTGGGCGATTCTCGGGTCCATCGGTGTGTTTGCTGATGAACGTCCAGTGAGCTGTTGCCTTAAAATAGGACGCAGAAAAGTATCCTTGGACAAAGTATTGAACTACAGAATGCAAATTAGAGGACTGTGTCCCATAACAGCAGTTGTGATCCAGACAGTATCTGGGAAACGACTCTGTTCCGATCCTAGCAGTGACTGGACAAAGAGAGCAATGAGGAAGGTGGATGAAGCAAAGAAGAAGACCAGAGAGCAGGATCCTGTACCTACAGAAGGAGCATCGGCAGAGAGGAGCAGAAGAAGGGCAGATGCAGTGACAGCAACAGAACTGCAACTAAATAGCCAACAGAGTGACAACATGACAAGTAAAAGGAACAGCAAAATACAACCACAAGTGGGACccaaagaaatgaagaaaatgtgtaaaagtaaaaaagtgtaagaacaaaaactgtgaaaaaatgtgctaaaaatgTGTTTGGGCTCAATTTACTTTTCATTAAGAAGAGGAAGGCTTTTAAAACTGTGGGTCAGGGAGTGAGTCACTGTTTGCCTCTTTtggtttaaatgattcatttcacattgcatgtttagttttttatgtttttaaagtttagtGTTACAAATCACGCAAGCAAATCTATAGTTTGGTTATCGCCAGTTTCCTCTTGTCACGCTCGTTTCTGTATTAAAAGAGCCAATGCTTCATTCTTTCAGTTTCTCTCATATTCAATAGCACTTCATTGTCATGCACACTCATAATGTAATTATAACGTGATTAATACTGCATGCGAATAAAAGAGATACAAAGTGAACACAAAGAGAATATGATTTTACTATGCGATTTATGATCTTGGTAATTATAACTGCAGTTGTCACGCCATCACTGCCGTCACCATCCGAACCTGTCACATGGTGACGATGGTCATGCTTCTGCCTTAGGAATCCCTTGATCTCCTGTATCATTGAAAGGAAAGcactattattttctttcattcattatcTTTTGTGTTGGAGTTGCTTCCTATGTTTGATCCTATGGCTGATTGCCGATTcctgtgttattttattaaa

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220909.1 True 1123 mRNA 0.40 3 19618385 19619892

Neighbor

gene id symbol gene type direction distance location
ccl20l LOC107708274,LOC107668934,LOC107583148,LOC107706309 coding upstream 16441 19600097 ~ 19601944 (+)
zgc:136870 LOC107668990,LOC107580513,LOC107738198 coding upstream 268367 19348346 ~ 19350018 (+)
LOC122361922 LOC107712402,LOC107573958,LOC107702059,LOC107681930,LOC107729611,LOC106569547,LOC107572764 coding upstream 794936 18809418 ~ 18823449 (+)
LOC122362102 LOC107575627,LOC107712395,LOC107655465 coding upstream 855410 18753904 ~ 18762975 (+)
LOC122362139 ndufa13,LOC107575626,LOC106569554,LOC102786334,LOC106600555 coding upstream 865087 18750731 ~ 18753298 (+)
LOC122357116 NA coding downstream 2149 19622041 ~ 19625338 (+)
LOC122324221 NA coding downstream 9849 19629741 ~ 19631130 (+)
epha4b epha4b,LOC107694655,LOC107668971,LOC108428906,LOC108268054,LOC103372263 coding downstream 24718 19644610 ~ 19745895 (+)
acvr1l acvr1l,LOC107678695,LOC107749086,LOC107602619,LOC107721710,LOC107690001 coding downstream 674693 20294585 ~ 20303774 (+)
odf3l2a zgc:110183,LOC107749223,LOC107602632,LOC107721708,LOC107588920,LOC107690329,LOC107678684 coding downstream 813577 20433469 ~ 20435422 (+)
G13768 NA non-coding upstream 2330 19613459 ~ 19616055 (+)
G13769 NA non-coding upstream 5480 19612269 ~ 19612905 (+)
G13748 NA non-coding upstream 77407 19538570 ~ 19540978 (+)
G13690 NA non-coding upstream 455043 19163105 ~ 19163342 (+)
G13682 NA non-coding upstream 485249 19132729 ~ 19133136 (+)
G13829 znf622,LOC107678698,LOC107602620,LOC107588872 non-coding downstream 692154 20312046 ~ 20314981 (+)
G13821 NA non-coding downstream 697289 20317181 ~ 20321388 (+)
G13857 NA non-coding downstream 843846 20463738 ~ 20463959 (+)
G13874 NA non-coding downstream 845635 20465527 ~ 20465846 (+)
G13851 LOC107721736 non-coding downstream 858071 20477963 ~ 20499950 (+)
rem2 LOC107583115,LOC107567555,LOC107668956,LOC107738122,LOC107706340 other upstream 1456243 18138644 ~ 18162142 (+)
nedd8l nedd8l,LOC107591390,LOC104949953,LOC104931181,LOC107559219 other upstream 1746969 17870258 ~ 17871416 (+)
G13137 NA other upstream 1801621 17784179 ~ 17816764 (+)
LOC122325453 LOC107668965 other upstream 1836021 17779339 ~ 17782364 (+)
G13111 LOC107738210,LOC107591364 other upstream 2010293 17607252 ~ 17608092 (+)
crlf1a crlf1a,LOC107602622,LOC107678692,LOC107588877,LOC107690059 other downstream 796311 20416203 ~ 20429348 (+)
gbp2 LOC107678697,LOC107602627,LOC107690079,LOC107721763 other downstream 847376 20467268 ~ 20473524 (+)
G13882 LOC107749119,LOC107602627,LOC107721764,LOC107659530,LOC107721763 other downstream 861772 20481664 ~ 20485218 (+)
LOC122326305 LOC107749119,LOC107602627,LOC107566983,LOC107690079,LOC107721763,LOC107721764,LOC107678697 other downstream 873282 20493174 ~ 20508391 (+)
G13998 LOC107659744,LOC107749160,LOC107563810,LOC107563823 other downstream 1544050 21163942 ~ 21164822 (+)

Expression


Co-expression Network