G506


Basic Information

Item Value
gene id G506
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1368335 ~ 1368897 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU604
GTGAAAACTGGGTGAATATTGGGTGCTTGGTTTTATGGTGTTACTTTTTTAAATTGTTACTTTAAGCAGACTTTAGCAGACACAGACCTTTGCCCCAGAGAGAGAGGCACTGCTGCTCCAGCGTCAGACACATGCCTGTGTAACAGTAGGCACTGCCACCAGCACAACTGCTGCCATCCATCAGGTAAAAGTTAGCAGGGCAGGACTCTGATTTCCCATCACAGTACTCAGGCAGGTCACAGGAGCCTGAAGGCGGACGGCACATCACACCTGGACTCTTCAGCTGGTCAAGAGTGCAATAGAACAAACTTGTATTAAATTAACTTTTGAGTCAAGTCACCTTTACTTATATAGTGCTTTATACAATACAGATTGTTTCAAAGCAGCTTTACAGTGATAACAGGAAAATGATTCAATGATGCAAACAGAGTTCATTTCGGCAGTACAGCAGCTCTAAAAAAAAATAGTGACATTGTTCAACTGAAGTCAGTTTAGTGTTGATTCAGTTCCATTGTAAAGATCATCAGTTATTAAAGCTGCAGTCCATAAGTTTTGCCTCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU604 True 563 lncRNA 0.40 1 1368335 1368897

Neighbor

gene id symbol gene type direction distance location
CI01000000_01347674_01352321 NA coding upstream 15107 1347674 ~ 1353228 (+)
CI01000000_01209256_01229839 NA coding upstream 137976 1208489 ~ 1230359 (+)
CI01000000_01196208_01208022 CLK4, CLK4A coding upstream 159978 1196208 ~ 1208357 (+)
CI01000000_01176488_01180221 4EB3L, 4EBP, EIF4EBP3, EIF4EBP3L coding upstream 188066 1176450 ~ 1180269 (+)
CI01000000_01149697_01163047 RUFY1 coding upstream 204355 1149697 ~ 1163980 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding downstream 36709 1405606 ~ 1410503 (+)
CI01000000_01459294_01485147 SLC44A1 coding downstream 90397 1459294 ~ 1485311 (+)
CI01000000_01511690_01517631 IKBKAP coding downstream 142793 1511690 ~ 1517719 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding downstream 311610 1680507 ~ 1691194 (+)
CI01000000_01848610_01851296 NA coding downstream 478646 1847543 ~ 1851898 (+)
G502 NA non-coding upstream 975 1367127 ~ 1367360 (+)
G449 NA non-coding upstream 4976 1362043 ~ 1363359 (+)
G499 NA non-coding upstream 64278 1303857 ~ 1304057 (+)
G483 NA non-coding upstream 113032 1255040 ~ 1255303 (+)
G480 NA non-coding upstream 115266 1252796 ~ 1253069 (+)
G505 NA non-coding downstream 3222 1372119 ~ 1374608 (+)
G504 NA non-coding downstream 7116 1376013 ~ 1376769 (+)
G507 NA non-coding downstream 8086 1376983 ~ 1377239 (+)
G508 NA non-coding downstream 9002 1377899 ~ 1378187 (+)
G509 NA non-coding downstream 9935 1378832 ~ 1379056 (+)
G350 NA other upstream 691398 671842 ~ 676937 (+)
G252 NA other upstream 861263 503209 ~ 507072 (+)
G435 NA other downstream 56224 1425121 ~ 1432854 (+)
G579 NA other downstream 446556 1767917 ~ 1908808 (+)
G2774 NA other downstream 3084881 4453778 ~ 4454232 (+)
G2850 NA other downstream 3357089 4725986 ~ 4726482 (+)
G6811 NA other downstream 8835934 10204831 ~ 10321679 (+)

Expression


Co-expression Network