G505


Basic Information

Item Value
gene id G505
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1372119 ~ 1374608 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU603
ATCCTATTCTTCTTTAATCCAGAATGGCAGCACAGCTAAAAGGTTTGTTTGAGCTGCGCCCTCTACAGTACAGGTGTAAATATGCATTTCCTTCAGCCTGAGGCTTATTCATTTCACTTTTGGTGTGAAAGGGCCTTTTTGCCAAAAATAGAACTTTTTTGTTGTTATTAAAAAACAAACAAGCAAGCCCAGCCCCGGTGATAAAAAGTAACGGAAAAGTAATGTAATGCATTACTTCTCATCAAAAAAAAGTAATGAAGTAACGCAATTAGTTACTTTTTTAGGGAGTAACGCAATATTGTAATGCATTACTTTTAAAAGTAACTTTCCCCAACACTGTTCGCAAACACTATGAAAACGTTACTTTTGAATGTTCTCTGAACATTCTGAAGCAAGTAAAAAAAAGTAAAACATCGAACTAAAACGTTTCAGAAAAAAAACGTTCCATTAACGATGTATAAATAATGTTTTGGGCTAACAATTTGAGAACACTATAAAACACCAGATAACTTTGAATGAACATTCGATTAACATTACTGGAAGAATGTCTTTGAGCGAATCTTGCCAAAATGTTAGCATAAGTTCTGAGATTGTTCCCTGTTAGCTGGGTTCGTTAAGCAAATTTTTGCATGCAAATTCCAGTCGTTTCTATCGGAATCCACACGAAAGATTTCCACACAAAGATTTCGGTAACACTTTACAATAAGGTTCAAGTTTGTAACATGAATTCGCCAGGTTGGTCAACAAAAAGCTTGGACATTTTTGACCACAAGATTTTGTTGAAATTCATTCCTCAGTTTTGGAATGTCAAGTAAGTGAGTAAATGATAACAGAATTTTAAAAATGATCCTTTTAAAACAAGATCCTTATCAGTGATCATTGTTATCAGCTCATATGTTAATTTGGTGGGAGGAGCTACAGTGAGACTGACGTTACTAGCTGAGCGTTGTCATTGGGCAGCTGTGGCAGCTGTTTCCTCCTCCAGGCCAGAAACGCATTCAGGGTGCTGTAGGGGTTGTCGGTCACACTGATTTTGTCTTGATCGTTCCAGATCTCCAACCAGATCAGAGCCACACGGATGTTCAGTGTTTTGTAATACTTATCTACAAAGTTAGCTGCTTCAAGCAGCGTCATTTTGGTCTTTTCAAGGTCCCAACCGTGATTCACAAACTGAAAAAGAGACATGATTAGGATGCATCTATAGGATGCCTCTACTTACTGTATATGGCTGAAATGATCTTTGTGTCATGTAGGTGGTGATTAGAGATGACTCTATCAGAGCAAAAGACAGTTATTCTGAGTCATGACAGGTAGTGAGTCTTAGCTGCAGAGGCACGGTGGAGTGAGTCAACAAACAGACAAGACTGATCTGAAGCTCCAGAACTGTCAGGTAATTGTCATTGTCATTTACTAGACACTTTAATCCAGTGCAACCATCTGGCACAAAATTGTGATGATTTCTGTGATAATAAGAATGTCCTACAAAAAGATGTTGATAAAAACCAAGGACAGACTGTCTGAATTCTGTAATCACAGAAATAAATACTGAGATTATTATTAGCTCTTTGCTAAAGAGCTATTTTTAAAAAATAGTGCATTATTTGATTAGGGCCAGTAAGTAATCACCTAGCAACCCAGACCACCCTAGCGACCACATAGCAACAGGCTAACAACCACTCATACCTTGTTTAGCAACACCCTAGCAACCACCCAGAACACCCTTTTTTGCATGCTTTTGCATTGGAAAGCACATTTTCTTTCAAAAAATATACAAATTACAAGTTACATTTATTGTTTAAAGATACACTACTATTCAAAAGTTTGGGGTTAGTACGATTTTTTAATGTTAGGGGCCATTCACACAGAATGCATTTTTTTTCATTCCACTGTGCTACTTTTCCATTATTTTTCTATGTAAAAAAGCGCTAAACGGACATGTTTGACCGTTGTGCTCCTGTTTGCGTCCTTTGCAGCATCTCACGTATGACACGGTGTTCTAAAAACTCAGGTAGCGTCTTGTGTTTTTCAAAGCAAAAACGCGATCTGTGGAACAGCCCTTAGTCTCTTGTTCGCAATATATTTTTATTTGAATATATTTTAAA

Function

NR:

description
PREDICTED: coagulation factor VII-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU603 True 2102 lncRNA 0.40 3 1372119 1374608

Neighbor

gene id symbol gene type direction distance location
CI01000000_01347674_01352321 NA coding upstream 18891 1347674 ~ 1353228 (+)
CI01000000_01209256_01229839 NA coding upstream 141760 1208489 ~ 1230359 (+)
CI01000000_01196208_01208022 CLK4, CLK4A coding upstream 163762 1196208 ~ 1208357 (+)
CI01000000_01176488_01180221 4EB3L, 4EBP, EIF4EBP3, EIF4EBP3L coding upstream 191850 1176450 ~ 1180269 (+)
CI01000000_01149697_01163047 RUFY1 coding upstream 208139 1149697 ~ 1163980 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding downstream 30998 1405606 ~ 1410503 (+)
CI01000000_01459294_01485147 SLC44A1 coding downstream 84686 1459294 ~ 1485311 (+)
CI01000000_01511690_01517631 IKBKAP coding downstream 137082 1511690 ~ 1517719 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding downstream 305899 1680507 ~ 1691194 (+)
CI01000000_01848610_01851296 NA coding downstream 472935 1847543 ~ 1851898 (+)
G506 NA non-coding upstream 3222 1368335 ~ 1368897 (+)
G502 NA non-coding upstream 4759 1367127 ~ 1367360 (+)
G449 NA non-coding upstream 8760 1362043 ~ 1363359 (+)
G499 NA non-coding upstream 68062 1303857 ~ 1304057 (+)
G483 NA non-coding upstream 116816 1255040 ~ 1255303 (+)
G504 NA non-coding downstream 1405 1376013 ~ 1376769 (+)
G507 NA non-coding downstream 2375 1376983 ~ 1377239 (+)
G508 NA non-coding downstream 3291 1377899 ~ 1378187 (+)
G509 NA non-coding downstream 4224 1378832 ~ 1379056 (+)
G510 NA non-coding downstream 5416 1380024 ~ 1380249 (+)
G350 NA other upstream 695182 671842 ~ 676937 (+)
G252 NA other upstream 865047 503209 ~ 507072 (+)
G435 NA other downstream 50513 1425121 ~ 1432854 (+)
G579 NA other downstream 440845 1767917 ~ 1908808 (+)
G2774 NA other downstream 3079170 4453778 ~ 4454232 (+)
G2850 NA other downstream 3351378 4725986 ~ 4726482 (+)
G6811 NA other downstream 8830223 10204831 ~ 10321679 (+)

Expression


Co-expression Network