G504


Basic Information

Item Value
gene id G504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 1376013 ~ 1376769 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU602
GATCGTTTCTAATGCCAGTGTAGACGAGGATCGTTTTCATTTTAAAACGCCGTTAAAAAACGAAAACGCACTAATGTAAATGGGGTCTAAGCCTCTTCAAAATTGATCCGAGAGGATATCTAGTTTGACTTTGGGTCAAGGTTTCTTGCACAGCAATTCCAGGGTTCTCACCCTATTGGTCTGCTGAGGCTTTGCCATGACATCAATCAGCTCTTGAAGGCTTTCCGTGTGATTCCCATCTCCATAGCGGTGTCCGCAGGTGCCCACTGGCAGTTTCAGGCTCTGGGTGTTGTATATGGCATGTCCCTGAGAGTGTGTTTGGTTAGCTAGCGGTTCGATCATGTAGCTCACGCTGTTATTTACTGTTATCATGCCCCTGGGGATTGAAAAGACAACATGTCAATCACGAGGATGTTTAAAGTTTGAGATTCAATGATAATATGGAAAATCATGGACATTTAAACAGGTCGACAGGATGGAAACCTCTCAGCTGGGTTTTGCACGGGAAGCAAAGCAGCTTCACTGCACAAAATGATCTTTATCCCGGATGGGAGGGTGAATAAAGAAGGGAATAAAACTGAATTGATAGCTAACTTGTGTTTATGCTGAACTGGGTTATTTAAGCGAAAACAGATTTCCTGGATATCCAAGTATTCCCCAAACACAAACCTAGTTACACTCACAACACTCCACAGATGTACAGCCTGAGACTATCAATGAAAATGCTTCCACTGCAGAAAGGCACAACAATATGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU602 True 757 lncRNA 0.35 1 1376013 1376769

Neighbor

gene id symbol gene type direction distance location
CI01000000_01347674_01352321 NA coding upstream 22785 1347674 ~ 1353228 (+)
CI01000000_01209256_01229839 NA coding upstream 145654 1208489 ~ 1230359 (+)
CI01000000_01196208_01208022 CLK4, CLK4A coding upstream 167656 1196208 ~ 1208357 (+)
CI01000000_01176488_01180221 4EB3L, 4EBP, EIF4EBP3, EIF4EBP3L coding upstream 195744 1176450 ~ 1180269 (+)
CI01000000_01149697_01163047 RUFY1 coding upstream 212033 1149697 ~ 1163980 (+)
CI01000000_01405606_01410241 NIPSNAP3A coding downstream 28837 1405606 ~ 1410503 (+)
CI01000000_01459294_01485147 SLC44A1 coding downstream 82525 1459294 ~ 1485311 (+)
CI01000000_01511690_01517631 IKBKAP coding downstream 134921 1511690 ~ 1517719 (+)
CI01000000_01680507_01690297 CPLX2, CPLX1, CPLX1.L coding downstream 303738 1680507 ~ 1691194 (+)
CI01000000_01848610_01851296 NA coding downstream 470774 1847543 ~ 1851898 (+)
G505 NA non-coding upstream 1405 1372119 ~ 1374608 (+)
G506 NA non-coding upstream 7116 1368335 ~ 1368897 (+)
G502 NA non-coding upstream 8653 1367127 ~ 1367360 (+)
G449 NA non-coding upstream 12654 1362043 ~ 1363359 (+)
G499 NA non-coding upstream 71956 1303857 ~ 1304057 (+)
G507 NA non-coding downstream 214 1376983 ~ 1377239 (+)
G508 NA non-coding downstream 1130 1377899 ~ 1378187 (+)
G509 NA non-coding downstream 2063 1378832 ~ 1379056 (+)
G510 NA non-coding downstream 3255 1380024 ~ 1380249 (+)
G511 NA non-coding downstream 5340 1382109 ~ 1382395 (+)
G350 NA other upstream 699076 671842 ~ 676937 (+)
G252 NA other upstream 868941 503209 ~ 507072 (+)
G435 NA other downstream 48352 1425121 ~ 1432854 (+)
G579 NA other downstream 438684 1767917 ~ 1908808 (+)
G2774 NA other downstream 3077009 4453778 ~ 4454232 (+)
G2850 NA other downstream 3349217 4725986 ~ 4726482 (+)
G6811 NA other downstream 8828062 10204831 ~ 10321679 (+)

Expression


Co-expression Network