wu:fb63a08 (LOC107749217,LOC107572082,LOC107660374)


Basic Information

Item Value
gene id wu:fb63a08
gene name LOC107749217,LOC107572082,LOC107660374
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 23424694 ~ 23442701 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222059.1
CATAACAGCCGGCACATTCAAACTCTTCTCATTGTGCTGGGGTAGACCCACCTCTGCTCAATATTAGAAGACTTATTAGTGTTACACTGGGAGAGACACTATGTCAGGGGACACGTTTCTGAGGTTGCTCACTATAGCAGCTTGTGTTCTAAACACTGAGGCTTATTCAGGTGGTTCTCTACTCACTCTTCCTGAACGGAGGTCAGATGCAGATTATTCGGCAAAGTGTGATTTTGGCAGTGATTTGCCGGCATCCTGCGATTGGACCTCTGAGGGACCCATCAGCGCTCAGACGGCAGCAGGTGCTGGTGCGTTTCGCCTCAAGAGTGGATTTCTTAAGATCTCAGAAGACTCCTGTCTGGAGTTCTGGTACCATAAACCTAACAAGAAGAGTTCTGATCTCAAAGTTTTGCTAGAGAGTGATATTCTGCAAACACTGATTTGGACGTCAGAGACATCTAGCACTGGAGACTGGAGACGAGTCTTCATCCCTCTCACAAAGCAGTCTGATAAAGATGACATCCAGGTTGTTTTTGAGCTACTAAAAGGTCTACAAGATGATGAACAAACTGCTTTTGATAGAATAGGAATACGAAAGGGCCAATGTGGGCCACAATGTCAGCGGGGAGGCACATTTTGGACTGATAAAAGCACTCGCTGCACTTGCACAGATGAGCAACTTATCTGTTCTCACGTCCCTCGTTCCAAAGACACTTTTGGCACCTGCCACGTGGCCTCTAACCCACACTACACTACTTTTGATGGGGTCAGTTTCCAATTTGAGAGTCCTTGTACCTACGTCTTGTCAAAGGTCTGCGACGACTCAGGGTTGCTTCCGGAGTTTGCAGTGGAGGTGCAGAATGAGAAAAAAGGGAACTCGCACTTATCCTCCATTCAGCAGGTGAACATCAATGTACATGGTCTGAGAGTGACCATGGTGAGGACAGAGAGGAGCAAAGTCATGGTTAATGGGATCTGGAAGAATCTCCCTCTACTCCTGCAAGGAAACCGAGTTACGGTTAATACCCAAAGAGACGCTTTGATCCTCCAGACAGACTTCAAACTGTCCGTCTTCTACTTAAGATCAGGTGCCGTTCAGGTGATTGTCCCAAGCCATTACTCAAACAAAACCTGTGGCATGTGTGGCAACTATAACCACGAGACAGAAGATGACTTCAAGATTCCAGCCAGGTCACTGATGCAGGACGTGCACATGTGTCAGGAACCCACCCTGCCCAGGGTCTGTACAGACGAAGAGGAGCAGAAGTACTCCAGCGAGATTTACTGCGGCATGCTAACATCCGCACAAGGGCCATTCGCAACATGTTCATCTGTTCTGAACACGCATAGTTTCTTCCGAAGCTGCTTGTTAGATATGTGCACAACTCACGGAGATCCCACTGCCCTCTGCAATGCCGTCGAGGCCTTCAGTGCCACCTGCGGCAAAGTTGGGATCTCTGTTCTGGCCTGGAGGAACACAACATTCTGTCCCGTGGTGTGTGGCTCTCACAGCCACTATAACGCCTGTGCCAGCGGCTGCCCTAAGACCTGCTCCAGCCAGGATGCTACAGGGTCTTGTGGGATATGCGAGGAGCGCTGTGAGTGTGACGATGGCTTCATGTTCAGCGGAGGAGCATGTGTATTAGCTGAAGACTGCGGATGTTGGGCTAATGGACAGCATTATTTGATCAGAGAGACATTTATGGAAGGTGAATGTAAGCAACAGTGCCAGTGTCTGGAAGGGAACATTCAATGTTCACCTGCGTCCTGCAAAGCTGATGAAGTATGCATGGCTAAGGATGGGGTCTTGGGTTGCTTTCCGTCCAGCCCAGTGACCTGCAGTGTCTACGGTGACCCCCATTACATCACTTTCGATGGCAAGGCCTACTCTTTCTGGGGCACCTGCAACTACACCATAGCAAAAACCTGCGGGGCTACAGAAACCCACTTCACAATAACCGCACGGAATGAGGGACAGAACAACTCCGCAACTTCCTCTCTTAACTCTGTAGCTCTTGACGTGGAAGGCCTGCATATAGTCATCAAAAAGAACAAGCTGGTTTATGCCGACGGTGGTCAGGTTCACCTCCCTGTGGAGTTTGGCTCCTCCATGTCTGTGCTTCAGTCTGGACCCTACACTCAAGTTAATACAAACTTTGGCCTGAGGCTGCTGTTTGGAAACGCCAGGCTGTTCGTCCAGGTGGATGAACGCTACAGAGGAGTGTTGTGCGGCCTGTGCGGTACCTACTCCGGGAGTCAGTTTGACGACTTTCTGACACCCGACGGCAACACGGTAGCGAAGCCGCACGAGTTCGCCAGCAGCTGGAATACCAAAGACAGCGACTGGCCTTGCAGTAATGGCTCTCCAGACCCCCCGGCGTGTCATCCGAACCTGGAGGATGATGCATATACAAAGTGCAGTGAACTGTTCGAAGATGCTTTCAAAGAGTGCCACTGGTTTATTCCACCACAGATTTATGTCAGCAGCTGCGTTTCTGATTATTGTATTTCCAAGGGTGACAAAGCTCAGCTCTGCACCTCTTTGGAGGACTATGTGTCTGCTTGTGAAATAGCTGAAGTGTTTCTGCCAAACTGGAGGAATCAAACCTTGTGTTTTTCCGATCCACAGCCTACAGATGACCCCACACCAACTCCATCGGCAGAAAGTTGCCCATGGAGCTGTAACTTTGACCGGGATGAATGTGGGTGGGAACAACTTATCCAAGACAGTTTTGATTGGACCAGATGGTCGGGGTCAACACCATCAAACTTCACTGGGCCAGCCGGTGACCACACCACAGGAAGTGGCTATTACATGTATATTGAGGGGGATAGCGTGGTTCATGGTGACTCAGCCCGAATAATGAGCCCAATCTGCAGTACATCCAGCAAGCAGTGTTTGAGCTTCTGGTTTCACATGTATGGCCTGGCAAATGCTATGTCACTCAACCTCTACATAGTTGAGAACAATCGTGCCATCAAAATATGGTCCAAAGTCAACAACCAGGGCAACAGATGGTACCAGGGCCAGGTTGAAATCAAACCACAACAGCCATTCCAGATCATTATTGAAGGCATCAGAGGCTCAGATCCTCGCTCAGATGTGTCTGTAGATGACGTGTCAATTATGCATGGTGCATGTGGCTCTGATTTGCCTGCAGAAGATTTTGACTTGACCACTCTGGCACCCCATCAATCTACTCCAAACTTACATGCCCCCCATCCAAATTGTAGAATGAACTGTGATTTTGAAAGCGACATCTGCAGTTGGACTCAGATGGTAACTGATGTTTTTGATTGGACAAGACACAGAGGCTCCACCCCCACATCAATGACTGGACCCTCCTTGGACCACACAACCGGAAGTGGGTTTTATATGTACATTGAGGGTGACAGTGCTACCCATGGCGACACAGCTCGTCTCCTCAGTGCAGAATGTCCTGATCCTCAACCTCATTGTCTTCAATTCTGGTACCACATGTATGGCTCCAGCTGGACCATGGGACTGAGCGTCTACCTGCTGCAGTATGGCAATGTGGCCAAGGAGGTGTGGAGAATGAGAGAAGACCAAGGAAACATGTGGCATCTTGCACAAGTGGACCTGAGTCCAGATGTTAAGTTCCAGGTGATCTTTGAGGGACGTAGAGGAAGCTCAGCTCGGTCAGATGTTGCCATTGATGACGTCTCACTGCACAGGGGAGCCTGTAGAGATTTACCATACCAGGTGGCTCCACCTTCAGTCCTATTGCCACAACCTGCACCCATCCAACGTAGAGAAATTCCAAACACTTCAACTTCTTGTAGCATCAACTGTGATTTTGAAAGAGACATCTGTGCTTGGACTCAGCTGGCGACTGATGTTTTTGATTGGACAAGACACAGAGGCTCCACCTCCACAGCAATGACCGGACCCTCCTCTGACCACACAACAGGAAGTGGGTTTTATATGTACATTGAGGGTGACAGTGCTACCCATGGCGACACAGCTCGTCTCCTCAGTGCAGAATGTGCTGATCCTCAACCTCAGTGTCTTCAGTTCTGGTACCACATGTATGGCTCCAGCTGGACCATGGGACTGAGCGTCTACCTGCTGCAGTATGGCAATGTGGCCAAGGAGGTGTGGAGAATGAGAGAAGACCAAGGAAACATGTGGCATCTTGCACGAGTGGACCTGAGTCCAGATGTTAAGTTCCAGGTGATCTTTGAGGGGCGTAGAGGAAGCTCAGCCCAGTCAGATGTTGCCATTGATGACGTCTCACTGCACAGAGGAGCCTGTAGAGATTTACCAAACCAGGTGGCTCCACCTTCAGTCCTATTGCCACAACCTGCACCCATCCAACATAGAGAAATTCCAAACGCTTCAGCTTCTTGTAGCATCAACTGTGATTTTGAAAGAGACATCTGTGCTTGGACTCAGCTGGCGACTGATGTTTTCGATTGGACAAGACACAGAGGCTCCACCTCCACAGCAATGACTGGCCCCTCCTCTGACCACACAACAGGAAGTGGGTTTTATATGTACATTGAGGGTGACAGTGCTACCCATGGCGACACAGCTCGTCTCCTCAGTGAAGAATGTGCTGATCCTCAACCTCAGTGTCTTCAGTTCTGGTACCACATGTATGGCTCCAGCTGGACCATGGGACTGAGCGTCTACCTGCTGCAGTATGGCAATGTGGCCAAGGAGGTGTGGAGAATGAGAGAAGACCAAGGAAACATGTGGCATCTTGCACGAGTGGACCTGAGTCCAGATGTTAAGTTCCAGGTGATCTTTGAGGGGCGTAGAGGAAGCTCAGCCCGGTCAGACGTTGCCATTGATGACGTCTCACTGCACAGAGGAGCCTGTAGAGATTTACCAAACCAGGTGGCTCCACCTTCAGTTCTATTGCCACAACCTGCACCCATCCAACGTAGAGAAATTCCAATCGCTTCAGCCTCTTGTAGCATCAACTGTAATTTTGAAAGAGACATCTGTGCTTGGACTCAGCTGGCGACTGATGTTTTTGATTGGACAAGACACAGAGGCTCCACTTCCACAGCAATGACTGGCCCCTCCTCTGACCACACAACAGGAAGTGGGTTTTATATGTACATTGAGGGTGACAGTGCTACCCATGGCGACACAGCTCGTCTCCTCAGTGCAGAATGTGCTGATCCTCAACCTCAGTGTCTTCAGTTCTGGTACCACATGTATGGCTCCAGCTGGACCATGGGACTGAGCATCTACCTGCTGCAGTATGGCAATGTGGCCAAGGAGGTGTGGAGAATGAGAGAAGACCAAGGAAACATGTGGCATCTTGCACGAGTGGACCTGAGTCCAGATGTTAAGTTCCAGGTGATCTTTGAGGGACGTAGAGGAAGCTCAGCCCGGTCAGACGTTGCCATTGATGACGTCTCACTGCACAGAGGAGCCTGTagagATTTACCAAACCAGGTGGCTCCACCTTCAGTCCTATTGCCACAACCTGCACCCATCCAACGTAGAGAAATTCCAAACGCTCCAGCTTCTTGTAGCATCAACTGTGATTTTGAAAGAGACATCTGTTCTTGGACTCAGCTGGCGACTGACGTTTTCGATTGGACAAGACACAGAGACTCCACCCCCACAGCAATGACTGGCCCCTCCTCTGACCACACAACAGGAAGTGGGTTTTACATGTACATTGAGGGTGACATTGCTACCCATGGCGACACAGCTCGTCTCCTCAGTGAAGAATGTGCTGATCCTCAACCTCAGTGTCTTCAGTTCTGGTACCACATGTATGGCTCCAGCTGGACCATGGGACTGAGCGTCTACCTGCTGCAGTATGGCAATGTGGCCAAGGAGGTGTGGAGAATGAGAGAAGACCAAGGAAACATGTGGCATCTTGCACGAGTGGACTTGAGTCCAGATGTTAAGTTCCAGGTGATCTTTGAGGGGCGTAGAGGAAGCTCAGCCCGGTCAGATGTTGCCATTGATGATGTTTCACTGCTAAGAGGAGCCTGTAGAGAGATCATGCTCTCGGACACACATGGAAATTTTGACAGCATAAGCAAAAAGGACATGATAAAGCCAAATGAAGAGGTGGCAAAAAAAGGGAGCGGGAAAGACACAGATGACAAAATCACAGCAAGACGGAGGCGGTCTCTGCTGTTTAGGGAACATTCTCGGGCTTAAGCTGAAACACTACGAGGCAAACCATCAGCTGAAAGCATCTGTCAGCTGTCACTATGAACCCACTCAACATCATAGCTCATAACCAAGGAAGTACTTCTTATCACCTCTAACTTagtcattttatattatgattTGTACATAACACCATTAAAAGATACGATGTTTGCCCTAATATCACATTGATTCTTCTTTCTCAAGTTCACATGTCTCCTAGCAGAGTAACCACATTACGTAAACTGTGATAATGTTACACAGATGTTTAAAGATCTACAGAACAACAGAATACTTATTTCCAACAATTAACCTATTGTTTCATCGTTTATAAAACTAGCTAACTTCTTTTTGCtggatgttttatttgcatacttTCATTCAATAAACTAATTTCATTCAATAA

Function

NR:

description
PREDICTED: MAM and LDL-receptor class A domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222059.1 True 6554 mRNA 0.49 38 23424694 23442701

Neighbor

gene id symbol gene type direction distance location
LOC122327352 LOC107572994,LOC107569272 coding upstream 164220 23250192 ~ 23260474 (+)
LOC122325295 mex3d,LOC107552694,LOC107713414,LOC107724985,LOC107696452,LOC107596262 coding upstream 399299 23018357 ~ 23025395 (+)
mbd3a mbd3,LOC107713415,LOC107696467,LOC107552695,LOC108427158,LOC107724987 coding upstream 408214 23005897 ~ 23016480 (+)
tcf3a LOC107671808,LOC107696481,LOC107724980,LOC107552693 coding upstream 426178 22958986 ~ 22998516 (+)
map2k2b map2k2b,LOC107671813,LOC107726325,LOC107696522,LOC108427153 coding upstream 477836 22938787 ~ 22946858 (+)
scg2b LOC107552496,LOC107552495,LOC107660152,LOC107738796 coding downstream 88069 23530770 ~ 23533357 (+)
mbnl1 mbnl1,LOC107724811,LOC107573627,LOC107745615,LOC107679403,LOC107567699 coding downstream 121063 23563764 ~ 23624866 (+)
LOC122354760 NA coding downstream 182306 23625007 ~ 23630373 (+)
LOC122354999 NA coding downstream 191521 23634222 ~ 23637430 (+)
klf6b klf6,LOC107698482,LOC107679408,LOC107572997,LOC107724813,LOC107569266,LOC107728392 coding downstream 255556 23698257 ~ 23702264 (+)
G14779 NA non-coding upstream 243537 23180731 ~ 23181157 (+)
G14778 NA non-coding upstream 244939 23179445 ~ 23179755 (+)
G14772 NA non-coding upstream 245563 23158098 ~ 23179131 (+)
G14611 NA non-coding upstream 374722 23046633 ~ 23049972 (+)
G14607 NA non-coding upstream 394815 23029167 ~ 23029879 (+)
G14832 LOC101170875,LOC106580681,LOC106612448 non-coding downstream 107904 23550605 ~ 23553233 (+)
G14837 cul3a,LOC107679386,LOC102194569,LOC105907048,LOC107567698,LOC107724810 non-coding downstream 115548 23558249 ~ 23562352 (+)
LOC122355031 NA non-coding downstream 199762 23642463 ~ 23643550 (+)
G14850 LOC107724821,LOC107698475,LOC107573003,LOC107709797,LOC107680183,LOC107577770 non-coding downstream 225862 23668563 ~ 23683398 (+)
G14841 NA non-coding downstream 247721 23690422 ~ 23691860 (+)
LOC122324535 NA other upstream 419440 23003165 ~ 23005254 (+)
fcer1gl LOC107671799 other upstream 729364 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 750419 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 939039 22461916 ~ 22485655 (+)
G14471 NA other upstream 1563252 21860891 ~ 21861442 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 102405 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 493220 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 602984 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 616711 24059412 ~ 24062202 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 641137 24083838 ~ 24096897 (+)

Expression


Co-expression Network