klhl18 (klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797)


Basic Information

Item Value
gene id klhl18
gene name klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 15214869 ~ 15222679 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222099.1
CACTCAGTAATACAGCTGAACCTACGGCGTCTCGGTTTGGACAAAAAGTGTCGTTTCCAGTCCATCAATGACGATGGGTGACACGATTTTTGAAGAATTAGAAgatttgatgcatttttctGTCGCCGATTTGCCCGCTCGTGGATATGCAGTGATGGAGGAGATCCGACGACAAGGAAAACTGTGTGACGTTACCCTAAAAGTAGGAGAGCACAAATTCAGTGCTCACCGAATAGTCCTTGCTGCTTCTATTCCATACTTCCATGCCATGTTCACCAATGACATGGTGGAATGCAAACAGGATGAAATTGTCATGCAGGGCATGGACCCCAGTGCACTTGAAGCCCTAATAAACTTTGCCTACAACGGACACATAGCCATAGACCAGCAAAACGTCCAGGCCCTCCTGATAGGGGCCAGTTTCCTGCAGCTTCAAAATGTCAAAGATGCCTGCTGCACTTTTTTACAACaaagGTTGCATCCAAAGAATTGCCTTGGTGTACGGCAGTTTGCAGAAACCATGATGTGCACCACACTTTATGATGCAGCCAACAGCTTCGTTCACCAGCACTTTGTAGAGGTTTCCATGTCTGAGGAGTTCCTGACCCTTCGGCCGGAGGAGGTGCTTGAGCTTGTGGGCTGTGATGAGCTCAACGTCCAAGCAGAGGAGCAGGTTTTTGAGGCCGTACTTGCTTGGGTACGACATTCACGTGAAGACCGGGAGACACGGTTACCAGAGCTAATGTCCAAGACCCGTCTGCCTCTTTGTCGACCTCAGTTCCTTGCTGACCGAGTCCAACAAGATGAGCTTGTACGCTGCTGCCACAAATGCAGGGACCTTGTTGATGAGGCTAAAGATTACCATCTGATGCCGGAGCGAAGGCCACACCTCCCAGCCTACAAGACCCGACAGAGATGTTGCACATCCATCGCAGGCTTAATCTATGCAGTTGGGGGCCTCAATAGTGCTGGTGACTCATTAAATGTCGTGGAAGTATTTGATCCAATTGGAAACTGTTGGGAGCGATGCCAGCCTATGAGCACAACCCGCAGTCGAGTGGGCGTTGCTGTCGTGAACGGGCTGCTTTATGCCATTGGTGGCTACGACGGCCAATCACGGCTTAGAACCGTCGAGGTTTACAACCCAGAAACTGACACATGGACCAAAGTTGCAAGCATGAATACTCAGCGCAGCGCAATGGGAACAGTCGTAGTTGATgggcatatatatgtgtgtggtgGATATGATGGCAAATCCTCTCTGAATTCAGTCGAGTGCTATTCTCCAGAGACTGACAGATGGACGATAGTTACAGAAATGAGCGCAAGCCGCAGTGCTGCTGGTGTTACTGTATTTGAAGGCAGAATATATGTCTCAGGTGGGCATGATGGTCTGCAAATATTCAACACGGTGGAGTACTACAACCATCACACTGCATTATGGCACCCTGTCGCTCCAATGATAAACAAGCGCTGTCGTCACGGCGCTGCAGCCTTGGGCAGCAATCTGTACGTGGCAGGAGGTTACGACGGCTCTGCTTTCCTCAGTGGAGCAGAGGTGTACAGCTCCGTAGCGGATCAGTGGAGCCACTTAGTGGCCATGAACACTCGACGCAGCCGCATTTCTCTGGTGGCCAACTGTGGTCGACTCTATGCAGTGGGAGGTTATGACGGACAGTCCAATCTCAGCTCTATGGAAATGTATGACCCAGAAACGAACCGCTGGACATTTATGGCACCGATGGTTTGCCACGAAGGTGGGGTAGGGGTGGGCTGTATACCCTTACAGCCTGCTTAACGCCACAATCTCCCTCAGCCCATAAGgacatttcaattatttaaaaaaaacaggtttttgtaCTCTGTGGTCAAACTAAATGCATTCATGACCCTTAGTTAACATGTTTGTATCGGAGGTACTATTATTcaggcttttgtttttttacaaaagcctGAAGCAGATATGCCAGTACACCTTTAATGGTGATCTAATCCTGTGTTTTTGACAACCAAATGTAGAATTCATACAtactttgaaaacatttacaggAAATGGGGCACGCTTCTGCTAAAAAGCACACTTTTGCACTGTTATCAGGTAGTGTGTGTTGTGGGCCCATTAAAGCATCGGTTTTTGGGGAATAtcatcatatatacatataaatttgtaattttgttcCTCTAAACTGGAAGCCAATTTAGATTTCTAGACAGGTGAAAGTTAACCACTGTTAACCCATGCCATAATTGGGAGAGTATAATCAAGAAGGTATGATTAATAAGGATaaacttgtttttaattattttatcaagaatatttcttatttagaaGTACTTATCTTAATGTATTTGGGATATTAATGGAAATTTAATGTGAGCAACCGACCTCTTATGTGTCTGTGCAAAACATCTGCTAGATGTGCCATGAACGTACACTTTACATGGGACTGTTTTTTGATTTCACCACTTTATTGACTTGAATTCTCttacatttgaaagaaaacGTCAATCTTTAGCAATTTGGGGATGACCGATCACCAGCTCTGTATTCCTGGACCCATCCAGTCCCACAtgttgcttttacttttttcaattttcctttgtgtttttgagAACCAGCACACATAACCAGGGAGAGTGAAAGTGATGTAGGGCTCATGTGCTTTCAGGATTATTCACTATAGTGGCTTCACATCCTCTTATTGAAGTATGAGTGTCGAAGACTTAAATGGAGCAcgttttgtgcaaaaaaaaatccaaattatgttttatgacTCTGTAGGAGTATACATTTTCAACTCGatgcttttaatttcaaataacacATCTGAAATTAGATTTACTgactgtgaattttttttttacacggtttatatttttcttctcaTGCTACCAATACTGCATTTCTCTgctgattatattttttttgattttattttgtattaactTCCGATTGTGATGCagtatttctaattttaatttattagtagctgtattttctttcctctttttatAGCATCGCACATGGTAGTTGGTCACATAAATGAGAATCAAGTTTACGTTTTACagaaatctaatatatatatggatCACATTTCTGTATGTGTTTGAATATATTCCTCGGCTACCTCCGTTTGAGATGGGAGAGCTCAACAGGGACAAATATCAAGTCTGCCGCCCTGttaccttttaaaacatttccattaaaCCTGAAGGAACGGCATTATTGAGATCTTTTGTGTGGGACTAAAATACTCTTTTTCACGTAATTCCTAAATGTCTTAAATAAACTTTGATTTTAAGGA

Function

symbol description
klhl18 Orthologous to human KLHL18 (kelch like family member 18).

NR:

description
kelch-like protein 18 isoform X1

GO: NA

KEGG:

id description
K10455 KLHL18; kelch-like protein 18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222099.1 True 3305 mRNA 0.43 10 15214869 15222679

Neighbor

gene id symbol gene type direction distance location
mycb mycb,LOC107584016,LOC107657430,LOC107713991 coding upstream 276911 14935722 ~ 14937958 (+)
ankhb ankhb,ankh,LOC107657429,LOC107713990,LOC107701025,LOC107718038,LOC108437249 coding upstream 282189 14918221 ~ 14932680 (+)
otulinb LOC107713989,LOC107657417,LOC107718039,LOC107701026,LOC107556827 coding upstream 299560 14910875 ~ 14915309 (+)
stard3nl stard3nl,LOC107686094,LOC107713985,LOC107664037,LOC107751580 coding upstream 351361 14855829 ~ 14863508 (+)
epdr1 epdr1,LOC107664036,LOC107558964,LOC108267170,LOC107713986 coding upstream 359698 14852700 ~ 14855171 (+)
zgc:136930 zgc:136930,LOC107599883,LOC107733879,LOC107657418,LOC107559002 coding downstream 7327 15230006 ~ 15235251 (+)
ccr9a ccr9a,LOC107579348,LOC107733890,LOC107657446,LOC107730785,LOC107557055,LOC107700981 coding downstream 15802 15238481 ~ 15240694 (+)
si:dkey-154p10.3 si:dkey-154p10.3,LOC107733888,LOC107657449,LOC107701000,LOC107730804,LOC107557070,LOC107736657 coding downstream 33365 15256044 ~ 15260435 (+)
LOC122357442 LOC107599890,LOC107657450,LOC107733889,LOC107730803,LOC107701003 coding downstream 37896 15260575 ~ 15262914 (+)
opn4.1 opn4.1,LOC107599887,LOC107733886,LOC107559015,LOC107730802,LOC107701002 coding downstream 39282 15261961 ~ 15266205 (+)
G12255 NA non-coding upstream 34615 15118457 ~ 15180254 (+)
G12273 NA non-coding upstream 63994 15148605 ~ 15150875 (+)
G12211 NA non-coding upstream 177863 15034929 ~ 15037006 (+)
LOC122328201 NA non-coding upstream 188080 15025403 ~ 15026789 (+)
LOC122323195 NA non-coding upstream 232051 14939189 ~ 14982818 (+)
G12321 prpf4ba,LOC107701001 non-coding downstream 29815 15252494 ~ 15253044 (+)
LOC122357737 NA non-coding downstream 275845 15498524 ~ 15500314 (+)
G12419 NA non-coding downstream 453524 15676203 ~ 15678446 (+)
G12432 NA non-coding downstream 500407 15723086 ~ 15804921 (+)
LOC122356092 NA non-coding downstream 509140 15731819 ~ 15742798 (+)
ackr4a LOC107664061,LOC107751559,LOC107556724,LOC107751558,LOC107751560,LOC107713978,LOC107586293 other upstream 431892 14776322 ~ 14782977 (+)
plxdc2a LOC107686089,LOC107713976,LOC107751571 other upstream 461708 14746107 ~ 14753161 (+)
G11854 jph1b,jph1,LOC107584332,LOC107550709,LOC107746914,LOC107732545,LOC107664083,LOC107686034,LOC107740042 other upstream 1035254 14175364 ~ 14179615 (+)
rnf152 rnf152,LOC107729101,LOC107679332,LOC107567413,LOC107674343,LOC107714840,LOC107584540 other upstream 2340861 12867929 ~ 12874008 (+)
LOC122358236 NA other upstream 2588482 12623823 ~ 12626387 (+)
LOC122357435 LOC107733881,LOC107599885,LOC107657419 other downstream 19118 15241797 ~ 15249249 (+)
dars2 dars2,LOC107720851,LOC107700987,LOC107558296,LOC107599907 other downstream 637500 15860179 ~ 15875764 (+)
G12531 LOC107722077,LOC107568983 other downstream 1044364 16267043 ~ 16268797 (+)
LOC122323293 NA other downstream 1227453 16450132 ~ 16456532 (+)
LOC122361622 NA other downstream 1501935 16724614 ~ 16776351 (+)

Expression


Co-expression Network