fndc7rs1


Basic Information

Item Value
gene id fndc7rs1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 21896676 ~ 21911669 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222546.1
ATGTCCTGCCCACACACAGGAGGACAGTATTACACAGCCACTTTGCAGGACAGCAGTGGACTGTCCTCTAGCTGCCAGTCTACAGGCTCACAGTGTAACGTGACAGGACTCAGGTGTGGTCAGCTCTACCATGTCAATGTGACGGCGTCAAACAATCTGTGCAGCAGCCCTCCTAGTGCTACTATGAACACTAACTCAgTCGGCTCCATCAGGGCAGTGTTTGATTGTCAGCTGGGTACAGCCACTGTGTCATGGCAGTATGCTGCAGGTGCTCAGGGATACGCAGTTTCTGCCTTGGCACCGGTGAACAACAAGGTTTGCTGCACATCCAACGGCACATACTGTGACCTGCGCAACCTGCAGTGTGGCAATGAGTATACAGTGAGAGTGCAGAGTTTGGGATACACATGCAATGGCAGTGCACAGATGACTGGTTCCCTGATCACAGGCCCGTGTTCTCCCCAGAACCTGGCAGTACAGTACAGTCCCTCCACCGCTGTGTTCTCCTGGAATGTCACTAAAGCCGGCACCAACTTTACAGCAAAGGCAGTAACCCCCGAGGGCCTGACAGTGACCTGTGAGACCTCTAACACGAGCTGCACCTTCCCACACCTGGATTGTGGCCAGATCTACAACGTCAGTGTGACGGCTCGCAACAATGTCTGCACTGGCACCTTAACCTCCGATCCTATCAAAACCGAACCCTGTCCTCCTCAGAATGTCAAAGCTAGCTTAACCTGCGCCACCCTCAGTGCTGCTGTCTCCTGGGAGCCTAGCCAGTTGGCAGTGAGATACGTTGCATTCCTAGAAGGCATAAATGGTCATTCCACTTCCTGTCAGACAAATAATACGTACTGCAGTGTACCCGGTCTCACCTGTGGAACAGTGTACTATGTTAGAGTCCGTGCCATTGGCGAGGTGTTCAACAGCTCTGACAGCATCAGGGTCAACATGACCTCAGcacCATGTCTGTCCACCAGTGTGTCTGCCGTGACGGACTGCTGTACAGATTCAGTTCTAGTGTCCTGGAGCGCCATTGCAGGGGCGGACAATTACTCTGTGACCATTTTGGGTTCAGGAGGTCAAACAGTGTCCTGCTCAACCAGTCAGAACAACTGTAACATCTCCTCCCTGCAGTGTGGACAGAAATTTAACGTCACCTTAAGCGCTACAAACCAGCAGTGCCAAAGCACCGCCCCCACCAATGTCACCTTCCAGTCCAGACCCTGCGTACCGCTGCAGGCAGTCGTCAGTAAACTGTGCGGTAACAAAATGTCTGTGATGTCTTGGGATGTGAGAGAAGAAGTGGATTATTACATCGCCCGAGCCACCAACGCAGCAGGAGGATACCAGCTTTGTAACTCCACCAACTCCGTTTGTTCCTTCTCTACTCTGGGCTGTGGAGAGACCTTTACATTTACTGTGACCGCCCACAAAGGCCAGTGCAAAAGTGACGTCAGCGCACCCGCATACCTCACTACagACCCTTGCAAACCAGAAAACGTGACTGCTCGCATGTCATGCGACAGCGAGACGGTGGCGCTCGATTGGTCAAAATCCAAAGGGGCGTCATTCTACATTGTGATGGCAACGGGGAGTCTTGGATACTTTGTAGACTTTAACACTACTTCCACTAACCTGTCTGTGTCCCTGCTCTGCGGACAAAGCTACAACGTGTCTGTCCAAGCGCAGAACGAGTACTGCGACACGCCGCTGAGCGCCCCTGCGGTTTTCAGACTGGCGCCCTGCACGCCTCTTAATCTCGTGACTTATTTGGAGTGTGAGAACCAGGTGGGTTCTGTCAGCTGGGGCCCAAGCGATGGGGCGGTCACGTACACTGCCACAGCAGTGGGCATGAATGGACTCGCACACCTGTGTGTTACTAACGGAACCAACTGCACCTGGGAGGACCTGCAGTGCGGTGAAACCTATAACGTTACGGTCACTGCCAATGACAGCCGCTGCACGAGCGCACGCAGCAACAGCACCATCATACACATGGACCCATGTGTTCCTCAAGCTCTGACGCCCGTCCTGGACTGTGGCACAGGGGTGGGCTCTCTGAGCTGGGCTTCCAGTGCTGGAGCCGAGACATACGAGGTGGTAGCAGTGAATGGAGCCGGTAACACGCTGGCATTCAGTACCAACATTACCAGCGGCTTCTTCTCAGAGCTGCTCTGCGGTCAACAGTACCAGATCACGGTCAGAGCAATCAACAGGAAATGCAGAAGTGTACAGAGTTCGCCTGCTTACTTGTCATCAGTTCCATGTGTTCCACAGAATGTCATATCTCAGCTGGACTGTATGTttaactttataaatatatggTGGAACATCAGCCGCGGGGCGGCGTCTTACCTGGTGGTTGCTAAGGGACCTGAGGGTCCAGTCATTGGCTGTAACACGACTGCGCAGGAGTGCAGGCTGCAAACACTGCGTTGCAGCTCCTCGTACAATGTCAGCGTTATCGCAGTAAACCAACAATGCAACGCTTCAAGCTCCATCTTTCAAATAAACACCGTGCCGTGTGTACCTACTCACGTGCAGAGCAGTGTGAACTGTACGACTCAAGCTGTATCCGTGTCCTGGGACCCAAGCGCAGGGGCCATTTCCTATGCTGCGGTTGCTCAGACTAGTGGTGGCTACGCTTCAGTGTGTAACAGCACCGGAACAGCGTGTGTATTTTCAGATCTGCTCTGTGGGATGAACTATAGTTTTGCTGTCAGCGCCACTGACGGGACCTGCAACACTGCACCGAGTCAAGCTGTTGTTCTGAGGACAGTGTCCTGTAGGCCACAGAATGTTAGCGCCCAGCTCAACTGTGACGCTAACTCTGCTGTTGTAAGTTGGGAACTTGGTAATAACGTCAGGAGTCACACAGTCCAGGCTATTGGTTCTGATGGACATCGCATCAACTGCTCCAGCTCCGACTACAGTTGTACTTTAACTGGCATGCACTGCAGCCAGTGCTATAACATTACCATCATTGCCTTAGATGGAGTATGTGACAATAGCAAGGCACAGCTCATTCTGAAGTCAGcTCCATGTGCACCTAGCAACGTTCAGACATCTTTGCATTGCGACATCAGCGGTGGCGGTGTTGTGTCTGTGTCGTGGGTGCAAGCAAACAGGACCGAGTCTTACATGGCTGTGGCCGTGTCTAATGATGGTCGTTCCTACTCTTGTAACACCACCGCTGCCTCCTGTGATCTACAGAAACTGCAGTGTGGTCAGATTTATAATGTGTCTGTCTACTCCCTGGTTCATGAATGTGGAGGTGTGAAGAGCACTACGTCTCAAGTgcagacagcCCCATGTCCCCCTCAGAACATGTCTGCTATTGTTCAGTGTGATTCAGGGTCTGCGCTGGTGAGTTGGAACCCAACAACGGATGCCAGCCAGTTCATAGTTGAACTTGAATCTGAGAGCACAGGAGCGATTTTCTCATGCaacagtacaaacacacagtgcTCCATCACCCATCTGCCCTGTGGAGAGAGATTCAACCTCACTGTGGTGGCACTGAGAGGCAGCTGTCAGAGTCAAGCGAGCAGTAACCTTTCCATCGCTTCAGCTCCATGTATTCCACAGAGGGTCAACGGTACTGTGGACTGTGTCACTAACTCTGCACGGGTTTCATGGGATGTAGCTAATGGCGCAGAGTCTTACGCAGTGCTGGCTGTAGGCGACAGTTACAATTCCACATGTATCAGCTCAAACTCCACTTGTAATGTACCTGACCTAGGCTGTGGAAGGAGTTATACCTTCTATGTCACTGCTTCAAATGCTGCTTGCACAAGCCCGCCCAGCAGCAGCTTCCAGCTGGAGACCGCACCTTGTGCCTTGTCGTCCATCATGGTGGTGGCTGAATGCCACAGTTCTGTTATCATGGTACAATGGCAGAAAGCTCGGAGTGGAAATTCTCTGTACTTTGCCACAGCAGAGGATCAAAACCATTCCCTCCTTTCCTGCAATAGCTCTGCTTCTTCTTGCAACCTAACCAATGTGCAGTGTGACAAGGAGTACACCATCATCGTAGCTGCTTCATCCAACAAAAACAGCAGCCTCCGCAGCCCAACCTACAAGATCAGAACCGCACCCTGTCAGCCCTCATCAGTACAGGCCAATGTAGACTGTCAGTCGaagggtgtgtttgtgtcatgGACCCCATCATATGTGGCACAGTCCTACCTGCTTACTGCAGTTGGCAGAAATGGAGACTTGAAGACGTGCAATACCTCGAACAATAACTGCACGCTAACCAATCTGCGTTGCAGCAACACCTATCAAGTATCTGTTTTAGCCAGTAACGAGAACTGCACCAGCTTGCCCAGTGCTAACGTCACCTTCCAAACAGTGCCATGTCAGCCAGTCAACTTAACTACAACCATGAAGTGTGGGAACAGTAGTAGTGCCTCCTTGTCCTGGGTGGGATGCACAGGGACAGTGTCCTACAAGGGACTTGCACAGTCAGAAACGGGCGCAACAATCTACTGTGAAACCACCAACACGTCCTGTGTTCTGGAGGGCTTAGTGTGTGGCACCGTGTACAACTTTACAGTGCAGGCAACTAGTGGCTTATGCAACAGTTCGAGTGAAACGCAAACTAAGGGAGCAGCTCCCTGCCCTCCAGCTGGATTGAAGGTTGTCCCTCGTACAGTAGTAAATGATACTCAGATCTTGAGGGCGTCTTGGTGCACTGTGAAATGTCCTAATTCAGAATACCTCCTGGCACTCACGGGCAGCATTCAGGGGAACAACCAAACTCTCTTTGACCTTGCCTCCTATTGGACAAGTCGCACATTCTTTGAGGTGCCTCTCCCTTGTAGCTCCACCTACAGCGCAACCATCAGTGCGAGGAACTCTGCCGCCACAAGCGACAAGTCCACTGCAGTCACTGGAACCACAGTACCTTGTGCTCCTCTAAGTGTGACGTTCTCTGCATCTTCGGGGGTAGTGGCATGGAGCGAGTCTCTATTTGCCACGAATTACACCGTGTATGGGGTTACATCCTCTGGTAGAACAAAACTCTGCATGACCTCACAGCTCCTCTGCTCTGTCACCAATTTCAACAGTGGTTACATTGTCGTAACTGCAAAAAACACTGCTGGGGAGAGTGAAGGCTCAGTGCCTGTTGCAGTGACCGCAGGTCGCAGAAGGAGGTGAGACCTGCCACAAATTGAGAAAGGCCTGACCTACCCAGAGTAAATGCTTGTATCTCATCGCACTCAAACTCTTGCCTGTGAGAATTCCTGCACTAATCTAAGAATTCTTGATACTGATATTTATCTTTTGCATGTTACATGTAGTCTGGTTCAAGgttcactttaaaaataaaaaaaaaaataaaccaatatttAAGGGTGGAATAGGTTGGCTGGGTAAAAGATTaacatttcttttcaaatgttcTCCAAACATCTGTTTCTGGCTGTAAGATTTACTTTCATGcaatgagaaatatttaaaaaaaaatgtcttatgtATTCCCATGTTTttgtatatgaattatattaaatacaaagagCATTTCTCCATGTGATCAGTCTTATAAATTATGACATGTAAagcacatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222546.1 True 5576 mRNA 0.50 23 21896676 21911669

Neighbor

gene id symbol gene type direction distance location
nlrp1 NA coding upstream 69444 21818882 ~ 21827232 (+)
LOC122358999 NA coding upstream 77514 21815200 ~ 21819162 (+)
wdr47a wdr47,wdr47a,LOC107749106,LOC107730459,LOC108428282 coding upstream 87344 21794688 ~ 21809332 (+)
camsap2b camsap2b,LOC107749095,LOC107730450,LOC107692873,LOC107660032 coding upstream 103086 21754405 ~ 21793590 (+)
LOC122355713 LOC107578657,LOC107730436,LOC107692891,LOC107692896 coding upstream 191782 21702091 ~ 21704894 (+)
trnam-cau_1 NA coding downstream 17078 21928747 ~ 21928819 (+)
gpc5c gpc5c,LOC107749179,LOC107660087,LOC107671592,LOC107730460 coding downstream 17628 21929297 ~ 22026087 (+)
gpc1b gpc1b,LOC107660106,LOC107749182,LOC107730456,LOC107549820,LOC107600088,LOC107671591 coding downstream 133199 22044868 ~ 22105101 (+)
LOC122324242 ephb1,LOC107549839,LOC107671589,LOC108430182,LOC106599529,LOC103359190 coding downstream 222685 22134354 ~ 22326172 (+)
epb41l3b epb41l3b,epb41l3,LOC107689342,LOC107729731,LOC107750217,LOC108427206 coding downstream 603736 22515405 ~ 22549867 (+)
G14477 NA non-coding upstream 1198 21895171 ~ 21895478 (+)
G14476 NA non-coding upstream 1545 21894608 ~ 21895131 (+)
LOC122359002 NA non-coding upstream 83773 21810929 ~ 21812903 (+)
G14316 NA non-coding upstream 176101 21719918 ~ 21720575 (+)
G14315 NA non-coding upstream 178684 21716771 ~ 21717992 (+)
G14484 LOC107568745 non-coding downstream 1851 21913520 ~ 21915028 (+)
G14532 NA non-coding downstream 556191 22467860 ~ 22472603 (+)
G14535 NA non-coding downstream 564112 22475781 ~ 22476202 (+)
G14540 NA non-coding downstream 600502 22512171 ~ 22513937 (+)
G14541 NA non-coding downstream 610742 22522411 ~ 22586250 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other upstream 29277 21857212 ~ 21867399 (+)
G14471 NA other upstream 35234 21860891 ~ 21861442 (+)
LOC122327294 aknad1,LOC107749213,LOC107660326,LOC107730428,LOC107671582 other upstream 43669 21843575 ~ 21853007 (+)
ccl20a.3 LOC107749165,LOC107660500,LOC107557866 other upstream 180386 21714683 ~ 21716290 (+)
ece2a ece2a,LOC107660439,LOC107600061,LOC107557862 other upstream 275579 21533245 ~ 21621097 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other downstream 550247 22461916 ~ 22485655 (+)
LOC122327931 NA other downstream 721860 22633529 ~ 22674275 (+)
fcer1gl LOC107671799 other downstream 779530 22691199 ~ 22695330 (+)
LOC122324535 NA other downstream 1091496 23003165 ~ 23005254 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 1633437 23545106 ~ 23547974 (+)

Expression


Co-expression Network