LOC122327432 (LOC107549368)


Basic Information

Item Value
gene id LOC122327432
gene name LOC107549368
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24071209 ~ 24073204 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222800.1
CAAATactctcttttgtttttacttttgtttttatttgtgcaggTAAAAGTGTTCTTTGTGCTGCTTtggtttttataattttagatgTTAGAGGACACTATGTCACTGCCTAAACTACAGGGTTAAAATCAATGTTACTGTACGTAGCCGTATCATGTTTACAATGCCTTTTACTGTCATTCAACAAACTCTACTTACAATAttgtaatacaaaatgtatgATGTATTTGATAATTTCTTATAATACAGCAGTGAGGATCTGTGTGAGCAGTCATGGACGGGGGTCTGTTTGTGCTGCTTCTGCTGTCAGGACTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCCGTACttctatataaatacagcaaTGTCGTGGCCAGATGCTCAGAGTTACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAACATGGATGACGTGAACAGGCTGGTAAATATAATAGATGCTGGATACAGCGGATCAGTGTGGATTGGACTGATGAAGGGGACAAAGAAACAGTGGAGTTGGTCTAATGGAGAAAACACAACTCCTCAGTACTATAACTGGGCTTCAGGACAGCCAAATGCAGATGGAGATTGTGTTGTTACTCTTTCTGGAGTTTGGCATGATATGGCATGTAGCTATAAGCGATATTTTGTGTGCTATAAAAGTGTTGGATACGCCTTTGTACAAAGTGCTAAAAACTGGACAGATGCTCGGAGCTACTGCAGACAGTATTACACCGATCTGGCCACCATCCACAGCTCTGTGGAGAATGACCAGGTAACTATGAAAATTCTATCTGGATGGTACATCTGGTTTGGGATGTTTCTGGACTCTTGGGGATGGTCTGATCAGTGGGATCTGAGGTTCAGACACTGGGCAGAAGGTCAACCAACGATGACTTCAGGTGACTGTGTTGGCATGACAAGAACCGAGTCTGGCAGATGGTCTCAGTACAGCTGTGATGTACAGCAGCCGTTTATCTGCTATGGAGATGACTTGAGAAAACAAATTGTGAGATTGAAAGTCACCTGTAATGGAAAATGTGCATTGAATGATCCTTCAGTACAGACAGCTATTCTGAATGAGATAAGTGAAAAGCTGAAGAACATGATGTTGGAGAGTGAAAGCAAAATAAGCTGGAGAAAGGGAGGGGATGGAGAGGTGTTTCATCAGGAGAACAACCATATGGTAAATTtagataataaatgtattaagaatgtgtaatgtattttttaacactgctttaaaaatatcaagTTAATGCTACTATGTTGTTTTGAGAGACTGGAGAATAGTAGTAGTAGAGCaatacaatattaacaaaattgATGAATGTAGTCTAATATTAgctgtaaatatttgcattctTACAAGAATACTTTTCTTTCaaccaatttaatttaatgaatttcctaaaatccttttaatattgtataatttaaattcaCAGATTTTTAACTGTACTTAGGTATTATCTACAAAGATGATTTTGaggtatgcatatgtatatgtattagcCCTCAtttaatgactaaaataaaacaatacc

Function

NR:

description
PREDICTED: macrophage mannose receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222800.1 True 1559 mRNA 0.38 5 24071209 24073204

Neighbor

gene id symbol gene type direction distance location
LOC122324443 NA coding upstream 39006 24029004 ~ 24032203 (+)
LOC122328481 LOC107599284 coding upstream 74059 23995183 ~ 23997150 (+)
LOC122323657 NA coding upstream 139320 23929631 ~ 23931889 (+)
LOC122323665 NA coding upstream 145578 23920231 ~ 23925631 (+)
hes6 hes6,LOC107737402,LOC107572989,LOC107728379,LOC107569265,LOC107679391 coding upstream 284954 23783724 ~ 23786255 (+)
LOC122324938 NA coding downstream 5952 24079156 ~ 24081504 (+)
LOC122326195 NA coding downstream 36459 24109663 ~ 24111683 (+)
LOC122327448 NA coding downstream 39573 24112777 ~ 24115107 (+)
LOC122327453 NA coding downstream 43538 24116742 ~ 24117634 (+)
LOC122325496 LOC107698467,LOC107713624,LOC107600258 coding downstream 476091 24549295 ~ 24551538 (+)
G14996 NA non-coding upstream 47601 24009525 ~ 24023608 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding upstream 76088 23994510 ~ 23995121 (+)
LOC122328496 NA non-coding upstream 76698 23993475 ~ 23994511 (+)
LOC122328475 NA non-coding upstream 85006 23985758 ~ 23986203 (+)
G14989 NA non-coding upstream 143596 23927294 ~ 23927613 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 68036 24141240 ~ 24141921 (+)
G15029 NA non-coding downstream 72930 24146134 ~ 24147389 (+)
G15039 LOC108433105 non-coding downstream 102081 24175285 ~ 24211058 (+)
G15041 NA non-coding downstream 113420 24186624 ~ 24250684 (+)
LOC122325249 NA non-coding downstream 147782 24220986 ~ 24231256 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 9007 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 22744 24045685 ~ 24048465 (+)
LOC122323670 NA other upstream 132193 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 523235 23545106 ~ 23547974 (+)
LOC122324535 NA other upstream 1065955 23003165 ~ 23005254 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other downstream 10634 24083838 ~ 24096897 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 168668 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 420234 24493438 ~ 24499685 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 614352 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 1097532 25170736 ~ 25175288 (+)

Expression


Co-expression Network