LOC122327448


Basic Information

Item Value
gene id LOC122327448
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24112777 ~ 24115107 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222826.1
AACAATCTTTTAGTTTCCCTTATTCTCCTGCTTATTAGAAGAGCAGCAAATATATTGTACAGCAGTGAGGATCTGTGTGAGCAGTCATGGACGGGGGTCTGTTTGTGCTGCTTCTGCTGTCAGGGCTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCCGTACttctatataaatacagcaaTGTCGAGGCCAGATGCTCAGAGTTACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAACATGGATGACATGAACAGGCTGGTGAATAAAGTGGATGCTGGATACAACGGATCAGTGTGGATTGGACTGAAGAAGCGGACACAGACACGCTGGAGTTGGTCTAATGGAGAAAACATGCTTAAACAGTATAGAAAGTGGAATACGGGACATCCGAACAGTGAAGGAGAATGTGGATGTTTTGCCTTTGGAGTTTGGCATAGCTATCCATGTTCATCACACTTACACTTTGTGTGCTACAGTGGAAATACTGGATACATCAGGGTACAGAAGTGGAAGAACTGGACAGATGCTCAGAGCTACTGCAGATACTTTTACACAGACCTTGTCACCATCCATAACTCCCAGGAACAAAACCAGATAAAGAAACCGATTCTGGGAGATGGTCTCAGTACAGCTGTGATCTACAGCAGCCGTTTATCTGCTATGGAGATAAGTGAAAAGCTGAAGAGCATGGGCCTAGAAAGTGAAAGCAAAATAAGCTGGAGAATGAAGGAAGATGGAGAGACTTTCTTCCCCGGTCaaagcactttccagcacctcTTCCAGAGAATTGAGGTAAGACCTGACCACCAGGTGCTCGCATGCCAGCCCCAACCCCAGACCTGGCTCCAGGGTGGGGCCCCGGCTGTGCCGTGCCAGGCGACGTCACGAGCCAATCACAGCGATCTCCCTCACCTGAGCCACACCTGCACCCCTTCAGGGAATCACAATGATCACTATATAAGCACACACCACAGTTCAGTCAGCGTCTGGGCTCCTATGCATGAAGTGGACTGa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222826.1 True 1022 mRNA 0.48 6 24112777 24115107

Neighbor

gene id symbol gene type direction distance location
LOC122326195 NA coding upstream 1094 24109663 ~ 24111683 (+)
LOC122324938 NA coding upstream 31273 24079156 ~ 24081504 (+)
LOC122327432 LOC107549368 coding upstream 39573 24071209 ~ 24073204 (+)
LOC122324443 NA coding upstream 80574 24029004 ~ 24032203 (+)
LOC122328481 LOC107599284 coding upstream 115627 23995183 ~ 23997150 (+)
LOC122327453 NA coding downstream 1635 24116742 ~ 24117634 (+)
LOC122325496 LOC107698467,LOC107713624,LOC107600258 coding downstream 434188 24549295 ~ 24551538 (+)
LOC122327477 LOC107653347,LOC107731078,LOC107585662,LOC107568542,LOC107675751 coding downstream 504880 24619987 ~ 24626282 (+)
viml viml,LOC107656138,LOC107600213,LOC107599242,LOC107757824 coding downstream 727671 24842778 ~ 24849115 (+)
pde1cb pde1cb,pde1c,LOC107713666,LOC108280739,LOC108433077,LOC107712805,LOC107663536,LOC107599240,LOC107757825 coding downstream 735656 24850763 ~ 24919804 (+)
G14996 NA non-coding upstream 89169 24009525 ~ 24023608 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding upstream 117656 23994510 ~ 23995121 (+)
LOC122328496 NA non-coding upstream 118266 23993475 ~ 23994511 (+)
LOC122328475 NA non-coding upstream 126574 23985758 ~ 23986203 (+)
G14989 NA non-coding upstream 185164 23927294 ~ 23927613 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 26133 24141240 ~ 24141921 (+)
G15029 NA non-coding downstream 31027 24146134 ~ 24147389 (+)
G15039 LOC108433105 non-coding downstream 60178 24175285 ~ 24211058 (+)
G15041 NA non-coding downstream 71517 24186624 ~ 24250684 (+)
LOC122325249 NA non-coding downstream 105879 24220986 ~ 24231256 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 15880 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 50575 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 64312 24045685 ~ 24048465 (+)
LOC122323670 NA other upstream 173761 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 564803 23545106 ~ 23547974 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 126765 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 378331 24493438 ~ 24499685 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 572449 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 1055629 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 1107037 25222144 ~ 25236609 (+)

Expression


Co-expression Network