LOC122327453


Basic Information

Item Value
gene id LOC122327453
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24116742 ~ 24117634 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222839.1
CTTATTAGAATACAGCAGCAGAAAGTGTTGATGAACAGCAGTGAGGATCTGTGTGAGCAGTCATGGACGGGGGTCTGTTTGTGCTGCTTCTGCTGTCAGGACTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCCGTACttctatataaatacagcaaTGTCGTGGCCAGATGCTCAGAGTTACTGCAGAGAGAGATTCACTGATCTGGCTACTGTAGACAGCATGGATGACGTGAACAGGCTGGTAAATATAATAGATGCTGGATACAGTGGATCAGTGTGGATTGGACTGAAGAAGGGGACACAGACACGTTGGGGTTGGTCTAATGGAGAAAACACATCTTCTCAGTACTATAACTGGGCTTCAGGACAGCCAAATGCAGATGGAGATTGTGTTGTTATTTATTCTGGAGTTTGGCATGATATGGCATATGTAGTTATAAGCGATATTTTGTATTGCTACAATGGACATTCTAACACCATGGTACTGAGTGCAAAAACTTGGAGTGACGCTCAGAGCTACTGCAGACAATATTACACAGACCTGGCCACCATCCACAACTCTGAGGAAAATAACCAGATAACTAAGATTATCTTAACCGGATGGTACATATGGATTGACACTGGGCAGCGGGTGAACCATCCCAGAGTTCaggatctggtgactgtgctgGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222839.1 True 677 mRNA 0.45 4 24116742 24117634

Neighbor

gene id symbol gene type direction distance location
LOC122327448 NA coding upstream 1635 24112777 ~ 24115107 (+)
LOC122326195 NA coding upstream 5059 24109663 ~ 24111683 (+)
LOC122324938 NA coding upstream 35238 24079156 ~ 24081504 (+)
LOC122327432 LOC107549368 coding upstream 43538 24071209 ~ 24073204 (+)
LOC122324443 NA coding upstream 84539 24029004 ~ 24032203 (+)
LOC122325496 LOC107698467,LOC107713624,LOC107600258 coding downstream 431661 24549295 ~ 24551538 (+)
LOC122327477 LOC107653347,LOC107731078,LOC107585662,LOC107568542,LOC107675751 coding downstream 502353 24619987 ~ 24626282 (+)
viml viml,LOC107656138,LOC107600213,LOC107599242,LOC107757824 coding downstream 725144 24842778 ~ 24849115 (+)
pde1cb pde1cb,pde1c,LOC107713666,LOC108280739,LOC108433077,LOC107712805,LOC107663536,LOC107599240,LOC107757825 coding downstream 733129 24850763 ~ 24919804 (+)
neurod6b neurod6b,LOC107713643,LOC107656134,LOC107599290,LOC107663516,LOC107757826,LOC107600270 coding downstream 813948 24931582 ~ 24934535 (+)
G14996 NA non-coding upstream 93134 24009525 ~ 24023608 (+)
LOC122328489 LOC107750089,LOC107757802 non-coding upstream 121621 23994510 ~ 23995121 (+)
LOC122328496 NA non-coding upstream 122231 23993475 ~ 23994511 (+)
LOC122328475 NA non-coding upstream 130539 23985758 ~ 23986203 (+)
G14989 NA non-coding upstream 189129 23927294 ~ 23927613 (+)
G15026 LOC107600260,LOC107713623,LOC107757800,LOC107676328 non-coding downstream 23606 24141240 ~ 24141921 (+)
G15029 NA non-coding downstream 28500 24146134 ~ 24147389 (+)
G15039 LOC108433105 non-coding downstream 57651 24175285 ~ 24211058 (+)
G15041 NA non-coding downstream 68990 24186624 ~ 24250684 (+)
LOC122325249 NA non-coding downstream 103352 24220986 ~ 24231256 (+)
LOC122327442 LOC107549368,LOC107569260,LOC107737397,LOC107681447,LOC107681444 other upstream 19845 24083838 ~ 24096897 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other upstream 54540 24059412 ~ 24062202 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other upstream 68277 24045685 ~ 24048465 (+)
LOC122323670 NA other upstream 177726 23935921 ~ 23939016 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other upstream 568768 23545106 ~ 23547974 (+)
abhd17aa abhd17aa,LOC107599293,LOC107757810,LOC107698472,LOC107600230,LOC108433103,LOC105904035,LOC108280794 other downstream 124238 24241872 ~ 24249991 (+)
G15065 rorcb,LOC107600225,LOC107757806,LOC107698501,LOC107713654,LOC107662989 other downstream 375804 24493438 ~ 24499685 (+)
zcchc2 zcchc2,LOC107713659,LOC107757820,LOC107599249 other downstream 569922 24687556 ~ 24754591 (+)
G15224 abhd4,LOC107713680,LOC107663512,LOC107655861 other downstream 1053102 25170736 ~ 25175288 (+)
LOC122362952 LOC107713688,LOC107600193,LOC107558294,LOC100331938,LOC107729982,LOC107655843,LOC107696796 other downstream 1104510 25222144 ~ 25236609 (+)

Expression


Co-expression Network