fam110b (fam110b,LOC107585622,LOC107722620,LOC107693712,LOC107691438,LOC107589841,LOC107718111)


Basic Information

Item Value
gene id fam110b
gene name fam110b,LOC107585622,LOC107722620,LOC107693712,LOC107691438,LOC107589841,LOC107718111
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10168240 ~ 10198276 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223700.1
GTGTGATTCAATAAGCTGGTAGGTGCTGCCCAACTCAAGGTTTTCAGCTCCAGTCGACAGCGAATGAGCACGGAAATATACCGCAGCATCCTCATTCATTTGAAGTGTTTACGCGCAGATCTTAAAGGCATCACCCCCACTGATAACCTGCAGCAGCTGGAGGACAAGGGCAGCTCGGACAGCAGCTCAGAGCCCATTAAAACCTGAGCCACACACAGGTTCAGTACATTCTCAGCCTTGGCCAGGAACAAAGGAGCAGCGACAAGGCTTTTCCCCACAATCCTTTGGTGCTTCCTCCCAGCTGGCCGAGCCTGACGGGTGTGCTGACACTGACTGGAGCTGAgtgctctctcttttttttttttttgccgtgcGGGGTCTGGCTGCGTGGAGGAAGCAGGGGCTAATTAATGAGCTGTGAGTATGAGGCCTCACTGCTGACAGCCAGTGGAGACAGGATTAAGAGTCCGGTCATCTGGCTTGATGTGTGTGCCTCCAGGCTGCCCCTTGACGAGAGTCCACTGCGGAATCCACCACGGCGGCCGCCGAGAGACCAGCAGAGATGCCCACCGAGACGCTACAGGCAGATAGCAAGCCCGCCGGTCAGGGTGGGGCCTTTGCCTCTGCTGTCCCGCTCCGCATCCTCAACAAGGGGCCCGACTACTTCCGTCGGCAGACCGAGCCTAACCCTAAGCGGTTGAGCGCCGTGGAGCGGCTCGAGGCCGACAAGGCCAAGTACGTGAAGAGCCAGGAGGTCATCAACGCTAAGCAGGAACCCATCAAGCCACAGGTACTCGCCAAGCCCCCTGTCTGCCCAGTTCCTGTCAAGAGAAGCGGCGGTATGGGACCTGGCTTGAAAGCCTCCAACAACAACGCCAAGTCGGACACCTGCGCAACCACCACCAAACGGGAGAATCTTAACCTGGAGATCCTGAAGAACATCTTGAACAGCTCTTCCTCATCCGAGGGGCCTGCAAAGGGGACGTCGCATAAAGTCGGGGCACGTAGCTGGGCGCCGCATCGCTCATCCGAGCTGACAGAACCTGGATGTCGCTCCTTTGCCGACTCGCTCAAGGTACCACCTTCCACGCAAGGTCGACACAGTCCACAGGGAGGCAACTTGAACCTGAGTCGCAGGCTGCTGGAGGAGAGATCATGCGAGGCTGACGGCGAGCGTTCATCGCTGCACGCCTCCCACAGCTCCTCAGACATTCGCCGTTTGTGCAATGGCAAGCCACTGAGAgcagcccgcagcagcagctcTTCTGCACCACCGCTGCCGCCCAAGCCTAGTGCCAAGGCCTTGGCTGCATGTGACAATGCTCCCTGTTCCTCCGAAAGAGAGACACTATCTAGCACTGCTACGGAGCTGGAGTTGGGCAGTTCTGTGGCCCGCAGGCCCTCCCTGCACCGGTCCAAGTCAGACCTGAGCGACCGCTACGCTCGGGCCGGGGCAGACGTGGAACGCTTCTTCAACTATTGTGGGCTGGATCCAGAGGAGCTGGAGAGCGTAGGTGTGGAAAGCTTTGCCCGAGCAAACTCGGACATCGTGTCACTCAACTTCCGTAGTGCCAGCATGATCAGCTCGGACTGTGAGCAGTCGAGACATAGTAACGACGACCTGACCGACGAAGAAGACGATGCTGGGGAGCGTGTTCCCTATGGTATTTCCGCCGTTGAGCGGAATGCCCGGGTCATTAAGTGGCTCTACAGCATCAGACAGGCACGAGAGTCTCAGAAAGTCTCCCATGTCTAAAAGAGGGAGCAGACCTTTCAACCTGGTCTGGACTTGGTACCTGCTTATTTTTGCAATCCATGCACTGTCTTTTAATCTTGAAAGATTACATGGCAAAGCATTTTGAGTTGACGGCACTTTTTAGTCGCTTTTTGCATTCAGTGTTCGCTGTCTTCTGAATCTGCATGACTCCTTAGACACTCAGCCTCTTTGCGGCCTCAAGGTAATGCAGCTTATGTAGGAGCCTCTTTAAAGATGGCTGCATCAATGCCATCTCTGTGCAGAGAACAACtcatatttccttttttcttttgttctttctgcCTCTGTCTGTCAGATGTTTTGATGCCAGCACCTTTCAGGTGCTTCTTATTTCACTTGGGTGCACTGAGCCAGGAAGCCATATCGGTATGAATGCAGAGCTGCAGTGTGTTTAGACTTCTTTTTGATCCTCTctttctgtcacttttttttttgacttgttCTTATGATGGATACGAGTTGTATGTATATAAACCTCTGTGAATAGACGCAGCAGAAGCATGTTTTAGTCTATTCTCGAGATCTCCCCGGCCCGACTTCTCTCGGTCAGCCTTGCACTGGTCATATTGTTCCAGCAGTATCATGACACCATTCAGCTTCATGTGGTTTGTTTTCACTTTGTCTGTCGTCCATAAAGTTACTGTTTGGCGGTTGATTATTTTTGTGGTACTATTGTTTCGAAAGGTGTAAATGCTGTaagaatatgtatataattttcaGAGTTGTCGGAAAaacattgtgtgatgatgacgAGTATGCTATGTTCCTCCATAGCTCCTTGTCTGTTTGTTCCTTCTCTGGGCTTGCATCGCGAGGCTGTGTGAGACATTGTCCATGAACAAATCTGTATGACACTGTTGTTGCAATGACATATATGTTCGGTATATTGAAGTTTGAGCTGTTACttaaaaatgatgtttgttcacatttagttctttttcatttcaataaatgGCTGATTTTGCCAACTTTCGCCATCAA
>XM_043223707.1
GTGTGATTCAATAAGCTGGTAGGTGCTGCCCAACTCAAGGTTTTCAGCTCCAGTCGACAGCGAATGAGCACGGAAATATACCGCAGCATCCTCATTCATTTGAAGTGTTTACGCGCAGATCTTAAAGGCATCACCCCCACTGATAACCTGCAGCAGCTGGAGGACAAGGGCAGCTCGGACAGCAGCTCAGAGCCCATTAAAACCTGAGCCACACACAGGTTCAATTCTCAGCCTTGGCCAGGAACAAAGGAGCAGCGACAAGGCTTTTCCCCACAATCCTTTGGTGCTTCCTCCCAGCTGGCCGAGCCTGACGGGTGTGCTGACACTGACTGGAGCTGAgtgctctctcttttttttttttttgccgtgcGGGGTCTGGCTGCGTGGAGGAAGCAGGGGCTAATTAATGAGCTGTGAGTATGAGGCCTCACTGCTGACAGCCAGTGGAGACAGGATTAAGAGTCCGGTCATCTGGCTTGATGTGTGTGCCTCCAGGCTGCCCCTTGACGAGAGTCCACTGCGGAATCCACCACGGCGGCCGCCGAGAGACCAGCAGAGATGCCCACCGAGACGCTACAGGCAGATAGCAAGCCCGCCGGTCAGGGTGGGGCCTTTGCCTCTGCTGTCCCGCTCCGCATCCTCAACAAGGGGCCCGACTACTTCCGTCGGCAGACCGAGCCTAACCCTAAGCGGTTGAGCGCCGTGGAGCGGCTCGAGGCCGACAAGGCCAAGTACGTGAAGAGCCAGGAGGTCATCAACGCTAAGCAGGAACCCATCAAGCCACAGGTACTCGCCAAGCCCCCTGTCTGCCCAGTTCCTGTCAAGAGAAGCGGCGGTATGGGACCTGGCTTGAAAGCCTCCAACAACAACGCCAAGTCGGACACCTGCGCAACCACCACCAAACGGGAGAATCTTAACCTGGAGATCCTGAAGAACATCTTGAACAGCTCTTCCTCATCCGAGGGGCCTGCAAAGGGGACGTCGCATAAAGTCGGGGCACGTAGCTGGGCGCCGCATCGCTCATCCGAGCTGACAGAACCTGGATGTCGCTCCTTTGCCGACTCGCTCAAGGTACCACCTTCCACGCAAGGTCGACACAGTCCACAGGGAGGCAACTTGAACCTGAGTCGCAGGCTGCTGGAGGAGAGATCATGCGAGGCTGACGGCGAGCGTTCATCGCTGCACGCCTCCCACAGCTCCTCAGACATTCGCCGTTTGTGCAATGGCAAGCCACTGAGAgcagcccgcagcagcagctcTTCTGCACCACCGCTGCCGCCCAAGCCTAGTGCCAAGGCCTTGGCTGCATGTGACAATGCTCCCTGTTCCTCCGAAAGAGAGACACTATCTAGCACTGCTACGGAGCTGGAGTTGGGCAGTTCTGTGGCCCGCAGGCCCTCCCTGCACCGGTCCAAGTCAGACCTGAGCGACCGCTACGCTCGGGCCGGGGCAGACGTGGAACGCTTCTTCAACTATTGTGGGCTGGATCCAGAGGAGCTGGAGAGCGTAGGTGTGGAAAGCTTTGCCCGAGCAAACTCGGACATCGTGTCACTCAACTTCCGTAGTGCCAGCATGATCAGCTCGGACTGTGAGCAGTCGAGACATAGTAACGACGACCTGACCGACGAAGAAGACGATGCTGGGGAGCGTGTTCCCTATGGTATTTCCGCCGTTGAGCGGAATGCCCGGGTCATTAAGTGGCTCTACAGCATCAGACAGGCACGAGAGTCTCAGAAAGTCTCCCATGTCTAAAAGAGGGAGCAGACCTTTCAACCTGGTCTGGACTTGGTACCTGCTTATTTTTGCAATCCATGCACTGTCTTTTAATCTTGAAAGATTACATGGCAAAGCATTTTGAGTTGACGGCACTTTTTAGTCGCTTTTTGCATTCAGTGTTCGCTGTCTTCTGAATCTGCATGACTCCTTAGACACTCAGCCTCTTTGCGGCCTCAAGGTAATGCAGCTTATGTAGGAGCCTCTTTAAAGATGGCTGCATCAATGCCATCTCTGTGCAGAGAACAACtcatatttccttttttcttttgttctttctgcCTCTGTCTGTCAGATGTTTTGATGCCAGCACCTTTCAGGTGCTTCTTATTTCACTTGGGTGCACTGAGCCAGGAAGCCATATCGGTATGAATGCAGAGCTGCAGTGTGTTTAGACTTCTTTTTGATCCTCTctttctgtcacttttttttttgacttgttCTTATGATGGATACGAGTTGTATGTATATAAACCTCTGTGAATAGACGCAGCAGAAGCATGTTTTAGTCTATTCTCGAGATCTCCCCGGCCCGACTTCTCTCGGTCAGCCTTGCACTGGTCATATTGTTCCAGCAGTATCATGACACCATTCAGCTTCATGTGGTTTGTTTTCACTTTGTCTGTCGTCCATAAAGTTACTGTTTGGCGGTTGATTATTTTTGTGGTACTATTGTTTCGAAAGGTGTAAATGCTGTaagaatatgtatataattttcaGAGTTGTCGGAAAaacattgtgtgatgatgacgAGTATGCTATGTTCCTCCATAGCTCCTTGTCTGTTTGTTCCTTCTCTGGGCTTGCATCGCGAGGCTGTGTGAGACATTGTCCATGAACAAATCTGTATGACACTGTTGTTGCAATGACATATATGTTCGGTATATTGAAGTTTGAGCTGTTACttaaaaatgatgtttgttcacatttagttctttttcatttcaataaatgGCTGATTTTGCCAACTTTCGCCATCAA
>XM_043223715.1
TGGTAGGTGCTGCCCAACTCAAGGTTTTCAGCTCCAGTCGACAGCGAATGAGCACGGAAATATACCGCAGCATCCTCATTCATTTGAAGTGTTTACGCGCAGATCTTAAAGATTCTCAGCCTTGGCCAGGAACAAAGGAGCAGCGACAAGGCTTTTCCCCACAATCCTTTGGTGCTTCCTCCCAGCTGGCCGAGCCTGACGGGTGTGCTGACACTGACTGGAGCTGAgtgctctctcttttttttttttttgccgtgcGGGGTCTGGCTGCGTGGAGGAAGCAGGGGCTAATTAATGAGCTGTGAGTATGAGGCCTCACTGCTGACAGCCAGTGGAGACAGGATTAAGAGTCCGGTCATCTGGCTTGATGTGTGTGCCTCCAGGCTGCCCCTTGACGAGAGTCCACTGCGGAATCCACCACGGCGGCCGCCGAGAGACCAGCAGAGATGCCCACCGAGACGCTACAGGCAGATAGCAAGCCCGCCGGTCAGGGTGGGGCCTTTGCCTCTGCTGTCCCGCTCCGCATCCTCAACAAGGGGCCCGACTACTTCCGTCGGCAGACCGAGCCTAACCCTAAGCGGTTGAGCGCCGTGGAGCGGCTCGAGGCCGACAAGGCCAAGTACGTGAAGAGCCAGGAGGTCATCAACGCTAAGCAGGAACCCATCAAGCCACAGGTACTCGCCAAGCCCCCTGTCTGCCCAGTTCCTGTCAAGAGAAGCGGCGGTATGGGACCTGGCTTGAAAGCCTCCAACAACAACGCCAAGTCGGACACCTGCGCAACCACCACCAAACGGGAGAATCTTAACCTGGAGATCCTGAAGAACATCTTGAACAGCTCTTCCTCATCCGAGGGGCCTGCAAAGGGGACGTCGCATAAAGTCGGGGCACGTAGCTGGGCGCCGCATCGCTCATCCGAGCTGACAGAACCTGGATGTCGCTCCTTTGCCGACTCGCTCAAGGTACCACCTTCCACGCAAGGTCGACACAGTCCACAGGGAGGCAACTTGAACCTGAGTCGCAGGCTGCTGGAGGAGAGATCATGCGAGGCTGACGGCGAGCGTTCATCGCTGCACGCCTCCCACAGCTCCTCAGACATTCGCCGTTTGTGCAATGGCAAGCCACTGAGAgcagcccgcagcagcagctcTTCTGCACCACCGCTGCCGCCCAAGCCTAGTGCCAAGGCCTTGGCTGCATGTGACAATGCTCCCTGTTCCTCCGAAAGAGAGACACTATCTAGCACTGCTACGGAGCTGGAGTTGGGCAGTTCTGTGGCCCGCAGGCCCTCCCTGCACCGGTCCAAGTCAGACCTGAGCGACCGCTACGCTCGGGCCGGGGCAGACGTGGAACGCTTCTTCAACTATTGTGGGCTGGATCCAGAGGAGCTGGAGAGCGTAGGTGTGGAAAGCTTTGCCCGAGCAAACTCGGACATCGTGTCACTCAACTTCCGTAGTGCCAGCATGATCAGCTCGGACTGTGAGCAGTCGAGACATAGTAACGACGACCTGACCGACGAAGAAGACGATGCTGGGGAGCGTGTTCCCTATGGTATTTCCGCCGTTGAGCGGAATGCCCGGGTCATTAAGTGGCTCTACAGCATCAGACAGGCACGAGAGTCTCAGAAAGTCTCCCATGTCTAAAAGAGGGAGCAGACCTTTCAACCTGGTCTGGACTTGGTACCTGCTTATTTTTGCAATCCATGCACTGTCTTTTAATCTTGAAAGATTACATGGCAAAGCATTTTGAGTTGACGGCACTTTTTAGTCGCTTTTTGCATTCAGTGTTCGCTGTCTTCTGAATCTGCATGACTCCTTAGACACTCAGCCTCTTTGCGGCCTCAAGGTAATGCAGCTTATGTAGGAGCCTCTTTAAAGATGGCTGCATCAATGCCATCTCTGTGCAGAGAACAACtcatatttccttttttcttttgttctttctgcCTCTGTCTGTCAGATGTTTTGATGCCAGCACCTTTCAGGTGCTTCTTATTTCACTTGGGTGCACTGAGCCAGGAAGCCATATCGGTATGAATGCAGAGCTGCAGTGTGTTTAGACTTCTTTTTGATCCTCTctttctgtcacttttttttttgacttgttCTTATGATGGATACGAGTTGTATGTATATAAACCTCTGTGAATAGACGCAGCAGAAGCATGTTTTAGTCTATTCTCGAGATCTCCCCGGCCCGACTTCTCTCGGTCAGCCTTGCACTGGTCATATTGTTCCAGCAGTATCATGACACCATTCAGCTTCATGTGGTTTGTTTTCACTTTGTCTGTCGTCCATAAAGTTACTGTTTGGCGGTTGATTATTTTTGTGGTACTATTGTTTCGAAAGGTGTAAATGCTGTaagaatatgtatataattttcaGAGTTGTCGGAAAaacattgtgtgatgatgacgAGTATGCTATGTTCCTCCATAGCTCCTTGTCTGTTTGTTCCTTCTCTGGGCTTGCATCGCGAGGCTGTGTGAGACATTGTCCATGAACAAATCTGTATGACACTGTTGTTGCAATGACATATATGTTCGGTATATTGAAGTTTGAGCTGTTACttaaaaatgatgtttgttcacatttagttctttttcatttcaataaatgGCTGATTTTGCCAACTTTCGCCATCAA

Function

symbol description
fam110b Predicted to be located in cytoplasm and microtubule organizing center. Is expressed in brain and epiphysis. Orthologous to human FAM110B (family with sequence similarity 110 member B).

NR:

description
PREDICTED: protein FAM110B

GO:

id name namespace
GO:0005815 microtubule organizing center cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223700.1 True 2758 mRNA 0.52 3 10168240 10198276
XM_043223707.1 False 2754 mRNA 0.52 3 10168240 10198276
XM_043223715.1 False 2642 mRNA 0.52 2 10168256 10198276

Neighbor

gene id symbol gene type direction distance location
gtf2b gtf2b,LOC107693714,LOC107585659,LOC107718116 coding upstream 48301 10114573 ~ 10119939 (+)
znf644a LOC107722621,LOC107693692,LOC107589847,LOC107586139 coding upstream 60816 10096409 ~ 10107424 (+)
cldn18 LOC107722530,LOC107693705,LOC107718157,LOC107586152,LOC107589887 coding upstream 88295 10078400 ~ 10079945 (+)
LOC122324805 LOC107695158,LOC107722506,LOC107586159,LOC107691708 coding upstream 90906 10075157 ~ 10077334 (+)
stk25b stk25b,LOC107693719,LOC107585675,LOC107722570,LOC107589848,LOC108432500,LOC108278137 coding upstream 106524 10055965 ~ 10061716 (+)
LOC122355329 cyp7a1,LOC107722516,LOC107693703,LOC107586715,LOC107691428,LOC107589909,LOC107718110 coding downstream 14615 10212891 ~ 10215867 (+)
rab2a rab2a coding downstream 126782 10325058 ~ 10336681 (+)
chd7 chd7,LOC107722533,LOC107718105,LOC107689390,LOC107589837,LOC107585562,LOC107688517 coding downstream 139247 10337523 ~ 10378222 (+)
c2h7orf25 zgc:55781,cunh7orf25,LOC107689392,LOC107722560,LOC107718178,LOC107589835,LOC107585545 coding downstream 224460 10422736 ~ 10425446 (+)
ralab ralab,rala,LOC107585502,LOC107718103 coding downstream 227643 10425919 ~ 10446802 (+)
G10838 NA non-coding upstream 26269 10141342 ~ 10141971 (+)
G10819 NA non-coding upstream 104426 10058532 ~ 10063814 (+)
G10753 NA non-coding upstream 152418 10014559 ~ 10015822 (+)
G10752 NA non-coding upstream 153874 10011937 ~ 10014366 (+)
G10738 NA non-coding upstream 157494 9989143 ~ 10010746 (+)
G10883 NA non-coding downstream 11287 10209563 ~ 10209851 (+)
G10902 NA non-coding downstream 193393 10391669 ~ 10391956 (+)
G10903 NA non-coding downstream 194417 10392693 ~ 10393150 (+)
G10901 NA non-coding downstream 223661 10421937 ~ 10539990 (+)
G10914 afg3l2,LOC107718155,LOC107688430,LOC107589831 non-coding downstream 246905 10445181 ~ 10482952 (+)
selenof selenof,sep15,LOC107693704,LOC106598901 other upstream 6431 10158532 ~ 10161809 (+)
znf414 LOC107722538,LOC107564712,LOC107693731,LOC107691619,LOC107718126 other upstream 251379 9911628 ~ 9916861 (+)
arpc5a arpc5a,arpc5,LOC107722639,LOC107693740,LOC107564704,LOC107677751,LOC107718183 other upstream 417028 9746570 ~ 9751212 (+)
olfm3b olfm3b,LOC107700521,LOC107710604,LOC107745696,LOC107680049 other upstream 996325 9162611 ~ 9171915 (+)
G10212 NA other upstream 2060463 8106865 ~ 8107777 (+)
lyrm4 lyrm4,LOC107718092,LOC107688446,LOC107722638,LOC107689406,LOC107688520 other downstream 464453 10662729 ~ 10665110 (+)
G10979 LOC107722568,LOC107585289,LOC107688450,LOC107718087,LOC107689412 other downstream 512854 10711130 ~ 10718194 (+)
LOC122359491 tesk2,si:dkeyp-75h12.2,LOC107585988,LOC107679327,LOC107602527,LOC107728975,LOC107714850,LOC107674209,LOC107562290,LOC107668671,LOC107588168,LOC107691921,LOC107753974 other downstream 921578 11119854 ~ 11135991 (+)
kcnh2a kcnh2a,LOC107718079,LOC107589806,LOC107722642,LOC107676096,LOC107586123 other downstream 1031484 11229760 ~ 11264234 (+)
fitm1l LOC107589905,LOC107718171,LOC107585187,LOC107688462,LOC107722554 other downstream 1105402 11303678 ~ 11338469 (+)

Expression


Co-expression Network