dsela (dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195)


Basic Information

Item Value
gene id dsela
gene name dsela,LOC107679326,LOC107584692,LOC107728919,LOC107714854,LOC107674195
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 12616040 ~ 12621416 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224163.1
TGCTGACAGCGATAGTTGTTACGTTTTTAGATAACTTGGAAGATGGAAAAAGCTACTTGACTTACAACGATGGGACAGTGTTGTGACAGAAGAAGAATGTAACGCAGGAAATTTAACCTTATAGCCTTAAAAGTGACATTGAAATGGCATCGTGGATTCTTCATATCTGTCTTTAGTTCAGATCAAATCAGAAAACATCACCACTTAGATAAACGACACAGCAAGCGGTACGTTTCCTTCGCCTCAAAGTGGATTAATGGATTATCTCGCTTCACGTGTAACAAGATGAGAAAAAGGCGTTAAGAGTGACTTTACATGCTGCTGTGAATAGTTACTAGAGAACGCTGCAACTTTCTGAAAACTTCCACAAGACCCGCGGGAAGCAGAGGATCAAACTTGTAATGACGGTTTCTGAAGACGGAAGTTTCTTTGACACATctctgcatttattatatttccgTTATGGCACTTTGTGCGGATATCGTTTTAAACAGCGAGACTGATTTTTGTACGCGGTTAAATAACACAACAGCGTACAAATAAATGCggaagaaaaatgttttgcgTGGGTTTATCAAGTATTCGTTTAGCCGGATAACCATTTATGGGAGTTAATGTTTTTTCAAGGAAATGGGAACGCTTCCTACTGGCTACATAAATACCGCCATAGTCATTTGGGTTTTTGCCTGAAAGGAAAAAGTATCTGCAGCTCTGCATGTGAGTACAAGTTGGACTAATAACAAATTTTTGGGAGCTTTAGAGGAGGAGCTTTTGAAGAGAAAAGCACCACATCTGTTTCTTGGATCATGGTCATGGAGAACATGCAGAGGTCTGCGGTTCTGCTCTGCGTCTTGGCTGTGGGACTTGCTTTCTGTGGAATTTCATCTGCCTCAGACAGATATTTGTCCTTGAATGAACACCAAACAGACAATACCACCTTGGCGGCACACCTTCACCCCAAGCTATACTTTGATCAGACAGAACTGCGTTTGATGAAACAGAGGGCCACCACCACGCATAGACACATATTTAAAGTTATTCGTAATGCTGTTTCTGTTATGTTATCCAACGCAGCTGTTTACCAGCCTCCGGTAAGCCACGAAGATTTCGGCAAGAAATGGAATGAGATTTATGGTAACAATTTGCCTCCTCTTGCACTATACTGTCTGCTTCAACCTGAGGATGCTGCTGCTTCTCAGTTTTTGATTGAGTACATGGACCGAATGGTGGAATATCCAGATTGGATGGTGTCCAGTGCGCCAAATGATGAGGTTCCCATCGCCCACTCCCTCACTGGATTTGCCACGGCGTATGATTTCATTTACACCTTTCTTGACACCCGCAGAAGATTGCGATATCTCAGGAAAATACGTTCTGTTACCGAGGAGCTTTTCGAGCTTTCCAAGCACAGGGGATGGGGAAAGCAGTTTATACAGAACCATCAGACAACTAATATACTAGCCATTCTCATTGGTGCTTTTGTGGCAGGGGAACATAATGACCCAGAGACCATGCTATGGAAGCAAATATCAGTGAACTACATGGAAAAAACTATGTTCCTTCTCAGCCACATTGTCGATGGCTCTCTTGATGAGGGTGTTGCGTATGGTAGCTACACAGCAAAATCCATCACACAGTATGTTTACTTAGCATTGCGTCATTTTCAGATAGACAACACACAGAACAACTGGCTCAGGGCTCACTTCATGTTTTACTTTGCTACAATGCTTCCTGGATTTCAAAGAACGGTTGGCATTGCAGACTCCAATTACAACTGGTTCTATGGGCCAGAGAGCCAGCTTGTATTTCTGGATGCATACGTGATCCAAAATGGCTCGGGAAACTGGCTGGCCAAGCAGATTAGGAAGCATCGTCCAAAAGATGGACCTATGGTGCATTCGGCAGCCCAACGCTGGGCTACTTTACATACAGAGTACATATGGTATGACCCTGCTTTAACTCCACAGCCTCCACCCGACTTTGACAAAGCAACCATGCACATTTTCTCCAACTGGGGGGTGGTGACGTATGGGGCAGGGTTACCTCAAGCTCAAGGTAATACCTTTGTGTCATTTAAATCTGGAAAATTAGGAGGGCGAGCAGTTTATGATATTGTCCACGCACAACCTTACTCTTGGGTAGAAGGCTGGACGAACTTTAACCCGGGGCATGAACACCCTGATCAAAACTCCTTTACTTTTGCACCAAATGGACTGGTGTTTGTTTCTGAGGCCTTATATGGCCCTAAATACAGCTATCTTAACAATGTGCTGGTATTCGCCCCTTCACCCACCAGCCAGTGCAATCAGCCATGGGAGGGACAGTTGGGGGAATGTTCAAAGTGGCTACGATGGGGAGAAAAGGAAGTCGGGGATACTGCTGGGGAGGTCATTGCAGCTTCATCGCATCAGGACATGTTGTTTGTGAGTGGAGAGTCTGTGTCGGCCTATTCATCCGCTATGAAGCTAAAGAGTGTTTATCGAGCACTTGTGCTTCTCAACTCTCAAACATTACTTGTTCTGGACCACATTGAGAAACATGAGCACTCCCCTCTCAGTTCTCTCAGTGCGTTTTTTCACAACCTTGACATTGATTTCAGGTACGTTCCTCACAGATCATTCGGAAAATACAATGGGGCTCTGATGGATGTGTGGGATGcacattacaaaatgttttggcTGGACGCTCAAGGATCCAGCCCCGTTGCCAGGATACAAGAGGCAGAACAGGCTGCAGAATTCAAAAAGAGATGGACGCAGTATATAAACGTGACCTTTCCCATGGAGAACACTGTCACTAGAGTGGCTTATTTGATGCATGGCCCGTACGTCAAGGTCTCAGACTGTAGATTCATAGACAACAGTAAAACTGGAGTCAAAATATCAGTGACTCTTAATGACACAGAGACAGTTGTGTCAGTTGTAACAAACTATGAAGACATTGAGGCCAGACATGGCTACTTGGGCTTTGCGGGCTTTGCTAAAACAGAAGACAACAGAGGAATAGTTCAGTTTGGCCGGGAAATTCACACCTTGCCTATTCAAGAAACAAAAGattttgtgtttgattttggATCGGTGGTAAACATCTCTGTGGTTTTGACTTTATGTTTGGCTTTAACttatgtaatgaaaaaaaggaaGTTTCATATGTCTTTCAATATGCTAATTCATTGCACTCTGTtctgtgtgctgtttttgtggGTGACTGAACTTTTATCACTTTTTTATGGATGTGAACAGCTTTTGTGCAATGTTAAGTCGAAAGATAGCAGCATATATGATGGAACAGAGTCCAACGTCCATGAGCTTCTCCCCATCGTCACGATTACATCCATGCCAGGCTCGGGCGCAGAGATCCTTCAGCACCTTTTCGATAATAGCTCTGACTTTGTATACCTTCGGATCCCTTCGACCTACCTGCGGTACCCTGTATCTCCTTTTGTCTCTCTGGTGGATGCTTGCGAGTGGTCCAAAGCAGATGCACAAAATGGACGATTTCGAGTCATTCAGGGATGGTTTAGTTCCATAGTCCACAATGTGAAACTGCACCTTCAAAACATTCAGTTGCACCAGAGCAGTGATGAAACTGATAACAAAGTCAAAGAAAAAGGACCTAGAAGGAGAAGAATGCTGCTGTCAGAGCAAACAAGAACAGGGGGTGACAAGGGTACCCATATGGACATCGCATACATTCAAGAGCTCAGGCAGCACATGGTAAAGTACCCAAATGCCCGGCCAGTGCTGAACATGGGCAGTGGCGGCTGGTTCTTGAAGCTGCCATATCTTCAAGAGGTCATAGGACACTCACTTCGCTCAGTTCACGTGGTCAGAGACCCACGTGCATGGATTTATCTAATGCTCTACAGCAGCAAGCCAAGCCTGTACTTGCGTAAGAATATTAAAAGGCACATCATCAACATTTTTAAGCATAACGTCGATGGTGTGGATCAGGGTTGTGCTGTAGTGGACTCTCAGTTCCTTTCTTTGAAGAAGATCCTTTCCCAGCTAGATCCCAACCCTGTACAGCTGCTAGCTCAGCTATGGCTGGCACACAATTCAGCAGGGCTCAAAGTGAGCTCAAGCCTTCCCCCACACACATACTTCATAGTCAAATTTGAAGACATTGTATATTTTCCTGAAGAGACAGCGAGAAAGATACATAACTTTCTTGGGATACCAGTTGCACCAGCTGCGTTAAACCAGCTGATATTTGCCACATCTACAACTTTGTATAATCTGATATATGAAGGAGATATATCACCTGCCAAAATCAACTTGTGGAAAGAGAATATGGCTGTAGATGAGATCAAACTCATTGAGGACACATGCTGGCCTGTGATGGAGAAACTGGGTTATAAAAGACATACATTCAGCCattcttttttgtaaatgtttttgcatttttcatacTGTGCCTGAAGATTATATAAGTAGCTCTGCAATCAGTCATCTGATTTCAGTATATTTAAGCATtgtctatatataatttaaatctttCAGATAAAACTGAGGGTAGAATGTCTTGTCAAAGCACTTTATTGCCTTGAAGGGACAAAGGTCTTAAAACATCAGTTGGCTTGGTTTTCTGTTGTTTCTTTGCATcattatataaactatatataaaacaccAATAGCAAatccatctttcttttttgaaaattgtatgCTTTGCTCATGATATAATCATAAATGGAACATTTAAAAACCTAAAGAAGTAAAAccacaaaacatcttaatgggtaacttttaatgcagttttaagaGACaactaatgtaaaatgttttaaaagacacAATGCAAATGGATTTTCCATGGCACCACATGCATATGTAGTGTAATCATCACTGTGGGATAACTGAAATGGAGGAAAATAACGACAATTTATGTgatatttctgtgaaacattTGCAAAGGCtgcttgtgtgtgcgtgcgtgtgtggtGCTATTTGCAGAGTCACTCCTTTGTGCCCAGCGTGCTTTCGGACTAAACTCAGCAAGCAATTTTTCATAGAATAAGGGCTGCATGGAGAATATTAAGACGGTCTTTACATTAGACCATACTGCTGCTTGTGTAGGTCCCCAGCATGTCTACCATatggtgtttttctttttttttggatattttgtattattgtcagaattattattttacattttgcattaagCAGTTTTTGAAAAACAGGAGTTCAGATATGGTGCAAGGCATGAACACAGTGGAACATTAAcctttttattgtacttttataaTGTGCTTAGATGAATTATCACAATAAACTTGACACTGGGTTTGATATTGGTTCAACAAATTGCACCAATAAGGACAGTTAAAGAAAAGACGTACAGATCATAATATTTCTCAACATAAACTAATAGG

Function

symbol description
dsela Predicted to enable chondroitin-glucuronate 5-epimerase activity. Predicted to be involved in chondroitin sulfate metabolic process and dermatan sulfate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in hatching gland and polster. Orthologous to human DSEL (dermatan sulfate epimerase like).

NR:

description
dermatan-sulfate epimerase-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224163.1 True 5377 mRNA 0.42 1 12616040 12621416

Neighbor

gene id symbol gene type direction distance location
si:dkey-181m9.8 LOC107584711,LOC107714829,LOC107729152,LOC107674166,LOC107602534 coding downstream 226059 12381141 ~ 12389981 (-)
LOC122356975 LOC107688511,LOC107674121,LOC107584783,LOC107602536,LOC107729248,LOC107714859 coding downstream 264729 12341195 ~ 12351311 (-)
tmem59 tmem59,LOC107688510,LOC107584797,LOC107729271,LOC107674113,LOC107714860,LOC107602538 coding downstream 275263 12337674 ~ 12340777 (-)
yipf1 yipf1,LOC107688551,LOC107586505,LOC107729441,LOC107602540,LOC107714864,LOC107674435 coding downstream 281572 12329751 ~ 12334468 (-)
zgc:113691 zgc:113691,LOC107714832,LOC107729460,LOC107586526,LOC107674428,LOC107688550,LOC107688549 coding downstream 286946 12327792 ~ 12329094 (-)
tmx3a tmx3,LOC107584650,LOC107679329,LOC107602529,LOC107674200,LOC107729365 coding upstream 392 12621808 ~ 12630962 (-)
toe1 toe1,LOC107729020,LOC107679328,LOC107714851,LOC107674219 coding upstream 29155 12650571 ~ 12653462 (-)
urod urod,LOC107729049,LOC107679325,LOC107674254,LOC107714848 coding upstream 124396 12745812 ~ 12753141 (-)
lyn lyn,LOC107584583,LOC107602520,LOC107674289 coding upstream 132155 12753571 ~ 12764691 (-)
tgs1 tgs1,LOC107679334,LOC107714845 coding upstream 143739 12765155 ~ 12785014 (-)
G11591 NA non-coding downstream 67525 12548205 ~ 12548515 (-)
G11576 NA non-coding downstream 127955 12487054 ~ 12488085 (-)
G11568 NA non-coding downstream 177032 12374651 ~ 12439008 (-)
G11559 NA non-coding downstream 241705 12372572 ~ 12374335 (-)
G11561 NA non-coding downstream 249175 12361651 ~ 12366865 (-)
G11668 NA non-coding upstream 36334 12657750 ~ 12658119 (-)
G11669 sepp1b,LOC107729074,LOC107674235,LOC107679336 non-coding upstream 36878 12658294 ~ 12661872 (-)
G11676 NA non-coding upstream 74064 12695480 ~ 12695679 (-)
LOC122362470 NA non-coding upstream 75500 12696916 ~ 12700309 (-)
G11722 NA non-coding upstream 452605 13074021 ~ 13090150 (-)
hltf hltf,LOC107688483,LOC107722619 other downstream 1001102 11592441 ~ 11614938 (-)
G11317 pde4ca,pde4c,LOC107722623,LOC107680260 other downstream 1038524 11576391 ~ 11577516 (-)
crsp7 crsp7,LOC107722610,LOC107688472,LOC107550620,LOC107709903,LOC107585090,LOC107680253 other downstream 1162837 11447089 ~ 11453203 (-)
cnn2 cnn2,LOC107585101,LOC107688471,LOC107709904,LOC107550622,LOC107680261 other downstream 1170927 11440990 ~ 11445113 (-)
kcnn1a LOC107722564,LOC107585128,LOC107718068,LOC107680246,LOC107589798 other downstream 1210340 11379243 ~ 11405700 (-)
xkr4 xkr4,zgc:123035,LOC107728991,LOC107679338,LOC107714844,LOC107674319,LOC106569249 other upstream 168108 12789524 ~ 12838093 (-)
LOC122323969 cahz,LOC107550722,LOC107755757,LOC107664098,LOC107686019,LOC107585971,LOC107751363,LOC108432254 other upstream 693813 13315229 ~ 13470263 (-)
LOC122328470 ptbp1a,ptbp3,LOC107602545,LOC107674042,LOC107732511,LOC107584874,LOC107558691,LOC107658670,LOC107744247,LOC107729315,LOC107688524 other upstream 932357 13553773 ~ 13564365 (-)
adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 other upstream 1957579 14578995 ~ 14610266 (-)
faim2a faim2a,LOC107718029,LOC107701017,LOC107556958,LOC107657438,LOC107709826 other upstream 2499171 15120587 ~ 15127491 (-)

Expression


Co-expression Network