si:dkeyp-68b7.5 (LOC107726324,LOC107671818,LOC107696531,LOC107552690,LOC107549807,LOC107750223)


Basic Information

Item Value
gene id si:dkeyp-68b7.5
gene name LOC107726324,LOC107671818,LOC107696531,LOC107552690,LOC107549807,LOC107750223
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 22752753 ~ 22757673 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224502.1
ACTGGTCGCTCAAACGGTGACGTACTTCAGTAGGAAATGGCCAAGTGTTTTGTGAGATTTGTGTAAACACTATTGATGCGCGCTCGGCATTCACCGAGGAAGGGAAGCACCGGAACGCACGCGAGCTTCTCCGCCGAACGAGCAGCATCTCGACCGCGAGCTTTTCTTCCTTTTATTTCTCCCGAACGCCGAGAATGTCCGCATCGGCCGACATCCACGCGCAGCTGGCCTCGATCCTCGAGCGCTTCGCCAAGTGCGCGCTGCTGGAGATGAGCCGCGCGGTGGAGACGGAGATGACGCGGCGGCAGATGGAGGTCGAGACGCTGCTGGTCAAGCTCCAGTTCACCGAGAGCGAGCTGCGGTCGGCCCGGCAGAACCAGGCGAGCCTGCGCTCCGTGGGAACGCAAGCCAGCGGCGGCGCGCAGAGAGAGGTGAACCTCAGCCTGGTGAAGTTCAATGAAAACCACGACGGAGAGATGCAGACAGAGACGTACACCGACGAGTGCTCGGCGCAGACCTTTGCACTAAATGAAGATGGGATCAAGTCCATTCAGATCAAAGAGGAGCACATGGAGGACGGACAGTGGGACAGCGGACCGATATCTCCTGCTTTTTGCCCGCTGGGTCCAGAACTGGAAGACCAGGACAGTTTCAGTGCGGGAACAACGGGACCAGCTAGAGACGCAGGCGGCGATTTCATCCTGAACAGTAAAATGAAACCCGGAGGACTGTGGGGTTCCCCCGTTTCTGAGGAGTACCCCCTGCCCCCCGAAGCCCAGAGCCTGGACGCGTCTCCTCCGGAGTCGGGCGAGCGGTACGAGCGGCACCGGGCCGACCCGAGCGCGCAGCACCCTGCGGGCGAGACGTCCCTGCGAGCCAACCCGGCGGCGGAGAGGAGCTCCCGCTGCCCTCAGTGCGGGAAGACCTTCACCACACGCTTCTACCTGAAGATCCACCAGCGCATACACACCGGAGAGAGACCCTACACCTGTCCTCAGTGCGGGAAAGGCTTCTACTGTAACTCGCACCTGATCTCACACCAGCGCTcgcacaccggagagaaaccctaCAGCTGCGAGGAGTGCGGCAAATCCTACTCGCACCTGAACTCGCTCAAACTCCACCAGCGCAGCCACACCGAGGAGGAAGCGTACGTCTACTGGTGACCCCGGACGGAGACGCTCTACGACTGCATCGCTTTAGGGTCGGTGTACTGCCTTTTCTGAGTAGCTGTTAGACGGATtacttttctaatatttttttatctatttgttaCACGTTGACTGAcgcataaaatgtatttcatttatatataaatcagtgctgtcaaaagattgcttttgtttatgtaatatgtgtgtaccgtgtatg
>XM_043224512.1
GGTCGCTCAAACGGTGACGTACTTCAGTAGGAAATGGCCAAGTGTTTTGTGAGATTTGTGTAAACACTATTGATGCGCGCTCGGCATTCACCGAGGAAGGGAAGCACCGGAACGCACGCGAGCTTCTCCGCCGAACGAGCAGCATCTCGACCGCGAGCTTTTCTTCCTTTTATTTCTCCCGAACGCCGAGAATGTCCGCATCGGCCGACATCCACGCGCAGCTGGCCTCGATCCTCGAGCGCTTCGCCAAGTGCGCGCTGCTGGAGATGAGCCGCGCGGTGGAGACGGAGATGACGCGGCGGCAGATGGAGGTCGAGACGCTGCTGGTCAAGCTCCAGTTCACCGAGAGCGAGCTGCGGTCGGCCCGGCAGAACCAGGCGAGCCTGCGCTCCGTGGGAACGCAAGCCAGCGGCGGCGCGCAGAGAGAGGTGAACCTCAGCCTGGTGAAGTTCAATGAAAACCACGACGGAGAGATGCAGACAGAGACGTACACCGACGAGTGCTCGGCGCAGACCTTTGCACTAAATGAAGATGGGATCAAGTCCATTCAGATCAAAGAGGAGCACATGGAGGACGGACAGTGGGACAGCGGACCGATATCTCCTGCTTTTTGCCCGCTGGGTCCAGAACTGGAAGACCAGGACAGTTTCAGTGCGGGAACAACGGGACCAGCTAGAGACGGCGGCGATTTCATCCTGAACAGTAAAATGAAACCCGGAGGACTGTGGGGTTCCCCCGTTTCTGAGGAGTACCCCCTGCCCCCCGAAGCCCAGAGCCTGGACGCGTCTCCTCCGGAGTCGGGCGAGCGGTACGAGCGGCACCGGGCCGACCCGAGCGCGCAGCACCCTGCGGGCGAGACGTCCCTGCGAGCCAACCCGGCGGCGGAGAGGAGCTCCCGCTGCCCTCAGTGCGGGAAGACCTTCACCACACGCTTCTACCTGAAGATCCACCAGCGCATACACACCGGAGAGAGACCCTACACCTGTCCTCAGTGCGGGAAAGGCTTCTACTGTAACTCGCACCTGATCTCACACCAGCGCTcgcacaccggagagaaaccctaCAGCTGCGAGGAGTGCGGCAAATCCTACTCGCACCTGAACTCGCTCAAACTCCACCAGCGCAGCCACACCGAGGAGGAAGCGTACGTCTACTGGTGACCCCGGACGGAGACGCTCTACGACTGCATCGCTTTAGGGTCGGTGTACTGCCTTTTCTGAGTAGCTGTTAGACGGATtacttttctaatatttttttatctatttgttaCACGTTGACTGAcgcataaaatgtatttcatttatatataaatcagtgctgtcaaaagattgcttttgtttatgtaatatgtgtgtaccgtgtatg

Function

NR:

description
PREDICTED: zinc finger protein with KRAB and SCAN domains 1-like isoform X1

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224502.1 True 1371 mRNA 0.57 5 22752753 22757673
XM_043224512.1 False 1365 mRNA 0.57 5 22752756 22757673

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-68b7.12 LOC107696752,LOC107552668 coding upstream 1223 22730674 ~ 22751530 (+)
nectin4b LOC107726329,LOC107696495,LOC107671794 coding upstream 34938 22696081 ~ 22717815 (+)
ncstn ncstn,LOC107552665,LOC107671788,LOC107696591,LOC107726318 coding upstream 64437 22672101 ~ 22688316 (+)
pnp5b pnp5b,LOC107730396,LOC107574318,LOC107750205,LOC107549813,LOC107684565 coding upstream 86841 22659064 ~ 22665912 (+)
foxl2b LOC107574316,LOC107730743,LOC107683772,LOC107750224,LOC107549802,LOC107684570 coding upstream 112159 22638886 ~ 22640594 (+)
tpgs1 tpgs1 coding downstream 12876 22770549 ~ 22773756 (+)
sf3a2 sf3a2,LOC107726326,LOC107696543,LOC107671791,LOC107750226 coding downstream 23150 22780823 ~ 22784846 (+)
LOC122328301 LOC107696585,LOC107552683,LOC107724989,LOC107549819,LOC107671817,LOC100151059,LOC108427150 coding downstream 75395 22833068 ~ 22870972 (+)
pias4b NA coding downstream 168640 22926313 ~ 22937828 (+)
map2k2b map2k2b,LOC107671813,LOC107726325,LOC107696522,LOC108427153 coding downstream 181114 22938787 ~ 22946858 (+)
G14549 NA non-coding upstream 101910 22643795 ~ 22650843 (+)
G14541 NA non-coding upstream 166503 22522411 ~ 22586250 (+)
G14542 NA non-coding upstream 174530 22577023 ~ 22578223 (+)
G14540 NA non-coding upstream 238816 22512171 ~ 22513937 (+)
G14535 NA non-coding upstream 276551 22475781 ~ 22476202 (+)
G14553 NA non-coding downstream 18567 22776240 ~ 22777003 (+)
LOC122357472 NA non-coding downstream 29048 22786721 ~ 22802473 (+)
LOC122328317 NA non-coding downstream 55593 22813266 ~ 22829545 (+)
G14589 NA non-coding downstream 90240 22847913 ~ 22879465 (+)
G14605 NA non-coding downstream 269107 23026780 ~ 23028239 (+)
fcer1gl LOC107671799 other upstream 57423 22691199 ~ 22695330 (+)
LOC122327931 NA other upstream 78478 22633529 ~ 22674275 (+)
LOC122327302 LOC107705949,LOC107599389,LOC107675701,LOC107737183,LOC107661566,LOC107586444,LOC107679834,LOC107719545,LOC107717972 other upstream 267098 22461916 ~ 22485655 (+)
fndc7a fndc7a,LOC107660526,LOC107671595,LOC107730461,LOC107568736 other upstream 885354 21857212 ~ 21867399 (+)
LOC122324535 NA other downstream 245492 23003165 ~ 23005254 (+)
G14831 LOC107679389,LOC107745621,LOC107567694,LOC108428304 other downstream 787433 23545106 ~ 23547974 (+)
LOC122323670 NA other downstream 1178248 23935921 ~ 23939016 (+)
LOC122327416 LOC107728372,LOC107569261,LOC107681443 other downstream 1288012 24045685 ~ 24048465 (+)
LOC122327425 LOC107728372,LOC107569261,LOC107681443 other downstream 1301739 24059412 ~ 24062202 (+)

Expression


Co-expression Network